RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 OR52E4Q8NGH9 312 aa11.08□□□□□ -0.64
CLIP1-219ENST00000620786 ACSL5Q9ULC5 683 aa11.08□□□□□ -0.64
CLIP1-219ENST00000620786 GRXCR1A8MXD5 290 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 TSPAN6O43657 245 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 PGLSO95336 258 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 FBLP22087 321 aaKnown RBP11.07□□□□□ -0.64
CLIP1-219ENST00000620786 RIN1Q13671 783 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 ZNF648Q5T619 568 aaPredicted RBP11.07□□□□□ -0.64
CLIP1-219ENST00000620786 RBM44Q6ZP01 1051 aaKnown RBP11.07□□□□□ -0.64
CLIP1-219ENST00000620786 C14orf80Q86SX3 495 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 ZZZ3Q8IYH5 903 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 TEPSINQ96N21 525 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 ASPNQ9BXN1 380 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 RBCK1Q9BYM8 510 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 ACTL8Q9H568 366 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 GPN1Q9HCN4 374 aaPredicted RBP11.07□□□□□ -0.64
CLIP1-219ENST00000620786 TCF7L1Q9HCS4 588 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 CENPMQ9NSP4 180 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 AKAP12Q02952 1782 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 DAPL1A0PJW8 107 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 TTC34A8MYJ7 566 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 LOC110117498-PIK3R3F6TDL0 507 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 SYNGR4O95473 234 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 ENGP17813 658 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 IL12AP29459 219 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 GALNT2Q10471 571 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 CBFBQ13951 182 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 RGS21Q2M5E4 152 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 OR4F3Q6IEY1 312 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 ZNF783Q6ZMS7 281 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 WDR60Q8WVS4 1066 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 ADAMTS10Q9H324 1103 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 PTGES2Q9H7Z7 377 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 OR6C74A6NCV1 312 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 MANBAO00462 879 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 BTN3A3O00478 584 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 ANGPTL1O95841 491 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 CD2P06729 351 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 RPS9P46781 194 aaKnown RBP11.07□□□□□ -0.64
CLIP1-219ENST00000620786 RAB2AP61019 212 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 INCA1Q0VD86 236 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 IL18R1Q13478 541 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 DNM1P34Q6PK57 102 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 AGTRAPQ6RW13 159 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 MAMDC4Q6UXC1 1216 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 MEIOBQ8N635 442 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 CLDN19Q8N6F1 224 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 C11orf24Q96F05 449 aaPredicted RBP11.07□□□□□ -0.64
CLIP1-219ENST00000620786 SLC29A3Q9BZD2 475 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 OR8D2Q9GZM6 311 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 TBC1D17Q9HA65 648 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 LYARQ9NX58 379 aaKnown RBP11.07□□□□□ -0.64
CLIP1-219ENST00000620786 SMPD3Q9NY59 655 aaPredicted RBP11.07□□□□□ -0.64
CLIP1-219ENST00000620786 CD207Q9UJ71 328 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 LOC730098B7Z3J9 87 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 CA3P07451 260 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 XIAPP98170 497 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 ID2Q02363 134 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 SLC25A11Q02978 314 aaKnown RBP11.07□□□□□ -0.64
CLIP1-219ENST00000620786 DMPKQ09013 629 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 RUNX3Q13761 415 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 KLHL26Q53HC5 615 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 TXNRD3NBQ6F5E7 133 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 NIPAL1Q6NVV3 410 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 TMIGD1Q6UXZ0 262 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 NAT8LQ8N9F0 302 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 BANPQ8N9N5 519 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 CMASQ8NFW8 434 aaPredicted RBP11.07□□□□□ -0.64
CLIP1-219ENST00000620786 OR2L3Q8NG85 312 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 LRTOMTQ8WZ04 291 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 ZSWIM3Q96MP5 696 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 GAL3ST1Q99999 423 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 TPSD1Q9BZJ3 242 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 SIX4Q9UIU6 781 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 A0A1W2PQU0 124 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 TGM5O43548 720 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 CYBAP13498 195 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 DHCR24Q15392 516 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 FAM182AQ5T1J6 154 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 TRIM63Q969Q1 353 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 MGME1Q9BQP7 344 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 XKR8Q9H6D3 395 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 BRD7Q9NPI1 651 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 ZNF446Q9NWS9 450 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 FLRT1Q9NZU1 646 aa11.07□□□□□ -0.64
CLIP1-219ENST00000620786 A8MT66 165 aa11.06□□□□□ -0.64
CLIP1-219ENST00000620786 NADKO95544 446 aaPredicted RBP11.06□□□□□ -0.64
CLIP1-219ENST00000620786 PSMA1P25786 263 aaKnown RBP11.06□□□□□ -0.64
CLIP1-219ENST00000620786 HNF1BP35680 557 aa11.06□□□□□ -0.64
CLIP1-219ENST00000620786 ADARP55265 1226 aaKnown RBP11.06□□□□□ -0.64
CLIP1-219ENST00000620786 C6orf52Q5T4I8 152 aa11.06□□□□□ -0.64
CLIP1-219ENST00000620786 SLCO6A1Q86UG4 719 aa11.06□□□□□ -0.64
CLIP1-219ENST00000620786 SIAH1Q8IUQ4 282 aa11.06□□□□□ -0.64
CLIP1-219ENST00000620786 CROCCP3Q8IVE0 287 aa11.06□□□□□ -0.64
CLIP1-219ENST00000620786 OR56A1Q8NGH5 318 aa11.06□□□□□ -0.64
CLIP1-219ENST00000620786 CAPSLQ8WWF8 208 aa11.06□□□□□ -0.64
CLIP1-219ENST00000620786 EZH1Q92800 747 aaPredicted RBP11.06□□□□□ -0.64
CLIP1-219ENST00000620786 FRMD6Q96NE9 622 aa11.06□□□□□ -0.64
CLIP1-219ENST00000620786 FEM1AQ9BSK4 669 aa11.06□□□□□ -0.64
CLIP1-219ENST00000620786 GIN1Q9NXP7 522 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms