RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 MRPL3P09001 348 aaKnown RBP4.91□□□□□ -1.62
VPS13D-214ENST00000620676 ZNF33BQ06732 778 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 INTS11Q5TA45 600 aaKnown RBP4.91□□□□□ -1.62
VPS13D-214ENST00000620676 CEACAM19Q7Z692 300 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 PDZD9Q8IXQ8 264 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 ZNF567Q8N184 647 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 OR2T35Q8NGX2 323 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 FOPNLQ96NB1 174 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 TKTL2Q9H0I9 626 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 NECTIN3Q9NQS3 549 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 SLAMF8Q9P0V8 285 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 COL20A1Q9P218 1284 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 FBXL2Q9UKC9 423 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 ANXA3P12429 323 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 BMP2P12643 396 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 AQP2P41181 271 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 KCNQ1P51787 676 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 STRADAQ7RTN6 431 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 PCDH19Q8TAB3 1148 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 C18orf25Q96B23 403 aaPredicted RBP4.91□□□□□ -1.62
VPS13D-214ENST00000620676 ANKRD60Q9BZ19 345 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 VRTNQ9H8Y1 702 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 RNF121Q9H920 327 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 SETD1AO15047 1707 aaKnown RBP4.91□□□□□ -1.62
VPS13D-214ENST00000620676 K7EPK0 472 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 TGM6O95932 706 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 RB1P06400 928 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 SFTPBP07988 381 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 UROSP10746 265 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 PRKCAP17252 672 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 HMGCS2P54868 508 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 NDUFA6P56556 154 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 CDK5R2Q13319 367 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 C10orf62Q5T681 223 aaPredicted RBP4.91□□□□□ -1.62
VPS13D-214ENST00000620676 ZNF767PQ75MW2 155 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 FAM71E2Q8N5Q1 922 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 SEC22CQ9BRL7 303 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 SMPD4Q9NXE4 827 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 WDPCPO95876 746 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 LIPCP11150 499 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 PFKLP17858 780 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 TAS2R39P59534 338 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 SIX1Q15475 284 aaPredicted RBP4.91□□□□□ -1.62
VPS13D-214ENST00000620676 FANK1Q8TC84 345 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 FCGR1BQ92637 280 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 NKD2Q969F2 451 aaPredicted RBP4.91□□□□□ -1.62
VPS13D-214ENST00000620676 PEBP4Q96S96 227 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 ZNF700Q9H0M5 742 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 MAN2C1Q9NTJ4 1040 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 ATP7AQ04656 1500 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 A0A1W2PPL8 197 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 CDC7O00311 574 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 E2F3O00716 465 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 RETP07949 1114 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 CD79BP40259 229 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 AFF3P51826 1226 aaKnown RBP4.91□□□□□ -1.62
VPS13D-214ENST00000620676 BEX3Q00994 111 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 NLRP8Q86W28 1048 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 RASGRP3Q8IV61 690 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 ATP6V0D2Q8N8Y2 350 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 TMEM161BQ8NDZ6 487 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 BCL7CQ8WUZ0 217 aaPredicted RBP4.91□□□□□ -1.62
VPS13D-214ENST00000620676 HPSE2Q8WWQ2 592 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.91□□□□□ -1.62
VPS13D-214ENST00000620676 OR4F21O95013 312 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 DBIP07108 87 aaKnown RBP4.91□□□□□ -1.62
VPS13D-214ENST00000620676 SF1Q15637 639 aaKnown RBP4.91□□□□□ -1.62
VPS13D-214ENST00000620676 CFAP52Q8N1V2 620 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.91□□□□□ -1.62
VPS13D-214ENST00000620676 OR14K1Q8NGZ2 314 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 ZSWIM3Q96MP5 696 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 KCNMB3Q9NPA1 279 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 MARK1Q9P0L2 795 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 ARHGAP28Q9P2N2 729 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 SPATA31A3Q5VYP0 1347 aa4.91□□□□□ -1.62
VPS13D-214ENST00000620676 UGT2B17O75795 530 aa4.9□□□□□ -1.62
VPS13D-214ENST00000620676 TNFSF8P32971 234 aa4.9□□□□□ -1.62
VPS13D-214ENST00000620676 GRAPQ13588 217 aa4.9□□□□□ -1.62
VPS13D-214ENST00000620676 C18orf21Q32NC0 220 aaPredicted RBP4.9□□□□□ -1.62
VPS13D-214ENST00000620676 AADACL4Q5VUY2 407 aa4.9□□□□□ -1.62
VPS13D-214ENST00000620676 ANKLE1Q8NAG6 615 aa4.9□□□□□ -1.62
VPS13D-214ENST00000620676 OR10G2Q8NGC3 310 aa4.9□□□□□ -1.62
VPS13D-214ENST00000620676 GRAPLQ8TC17 118 aaPredicted RBP4.9□□□□□ -1.62
VPS13D-214ENST00000620676 MRPS30Q9NP92 439 aaKnown RBP4.9□□□□□ -1.62
VPS13D-214ENST00000620676 TAS2R7Q9NYW3 318 aa4.9□□□□□ -1.62
VPS13D-214ENST00000620676 DISP1Q96F81 1524 aa4.9□□□□□ -1.62
VPS13D-214ENST00000620676 CIB4A0PJX0 185 aa4.9□□□□□ -1.62
VPS13D-214ENST00000620676 HACD1B0YJ81 288 aa4.9□□□□□ -1.62
VPS13D-214ENST00000620676 NCAM2O15394 837 aa4.9□□□□□ -1.62
VPS13D-214ENST00000620676 AP2A1O95782 977 aa4.9□□□□□ -1.62
VPS13D-214ENST00000620676 GOT2P00505 430 aaKnown RBP4.9□□□□□ -1.62
VPS13D-214ENST00000620676 NDUFV1P49821 464 aa4.9□□□□□ -1.62
VPS13D-214ENST00000620676 CASP7P55210 303 aa4.9□□□□□ -1.62
VPS13D-214ENST00000620676 CD47Q08722 323 aa4.9□□□□□ -1.62
VPS13D-214ENST00000620676 CAMK2GQ13555 558 aaPredicted RBP4.9□□□□□ -1.62
VPS13D-214ENST00000620676 DGKZQ13574 1117 aa4.9□□□□□ -1.62
VPS13D-214ENST00000620676 HIST2H2AA3Q6FI13 130 aa4.9□□□□□ -1.62
VPS13D-214ENST00000620676 ADNP2Q6IQ32 1131 aa4.9□□□□□ -1.62
VPS13D-214ENST00000620676 FRRS1Q6ZNA5 592 aa4.9□□□□□ -1.62
VPS13D-214ENST00000620676 LSMEM1Q8N8F7 131 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms