RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 CRB3Q9BUF7 120 aa16.35■□□□□ 0.21
HMGN3-203ENST00000620514 TRIM31Q9BZY9 425 aa16.35■□□□□ 0.21
HMGN3-203ENST00000620514 ZBTB20Q9HC78 741 aaPredicted RBP16.35■□□□□ 0.21
HMGN3-203ENST00000620514 PPANQ9NQ55 473 aaKnown RBP16.35■□□□□ 0.21
HMGN3-203ENST00000620514 TAS2R13Q9NYV9 303 aa16.35■□□□□ 0.21
HMGN3-203ENST00000620514 C5AR2Q9P296 337 aa16.35■□□□□ 0.21
HMGN3-203ENST00000620514 NXT1Q9UKK6 140 aaKnown RBP16.35■□□□□ 0.21
HMGN3-203ENST00000620514 SAR1BQ9Y6B6 198 aa16.35■□□□□ 0.21
HMGN3-203ENST00000620514 NUP210LQ5VU65 1888 aa16.35■□□□□ 0.21
HMGN3-203ENST00000620514 CLEC18AA5D8T8 446 aa16.34■□□□□ 0.21
HMGN3-203ENST00000620514 CYSRT1A8MQ03 144 aa16.34■□□□□ 0.21
HMGN3-203ENST00000620514 ZGLP1P0C6A0 271 aa16.34■□□□□ 0.21
HMGN3-203ENST00000620514 EZRP15311 586 aaKnown RBP16.34■□□□□ 0.21
HMGN3-203ENST00000620514 FBLP22087 321 aaKnown RBP16.34■□□□□ 0.21
HMGN3-203ENST00000620514 GNLYP22749 145 aa16.34■□□□□ 0.21
HMGN3-203ENST00000620514 ITGA3P26006 1051 aa16.34■□□□□ 0.21
HMGN3-203ENST00000620514 RGS4P49798 205 aa16.34■□□□□ 0.21
HMGN3-203ENST00000620514 EMP3P54852 163 aa16.34■□□□□ 0.21
HMGN3-203ENST00000620514 SOX8P57073 446 aa16.34■□□□□ 0.21
HMGN3-203ENST00000620514 TBPL1P62380 186 aa16.34■□□□□ 0.21
HMGN3-203ENST00000620514 OCA2Q04671 838 aa16.34■□□□□ 0.21
HMGN3-203ENST00000620514 AIMP2Q13155 320 aaKnown RBP16.34■□□□□ 0.21
HMGN3-203ENST00000620514 INPP5JQ15735 1006 aaPredicted RBP16.34■□□□□ 0.21
HMGN3-203ENST00000620514 PLEKHN1Q494U1 663 aaPredicted RBP16.34■□□□□ 0.21
HMGN3-203ENST00000620514 VWA2Q5GFL6 755 aa16.34■□□□□ 0.21
HMGN3-203ENST00000620514 CLEC18BQ6UXF7 455 aa16.34■□□□□ 0.21
HMGN3-203ENST00000620514 KIAA0408Q6ZU52 694 aa16.34■□□□□ 0.21
HMGN3-203ENST00000620514 SYDE1Q6ZW31 735 aaPredicted RBP16.34■□□□□ 0.21
HMGN3-203ENST00000620514 LAPTM4BQ86VI4 370 aa16.34■□□□□ 0.21
HMGN3-203ENST00000620514 ARHGEF39Q8N4T4 335 aa16.34■□□□□ 0.21
HMGN3-203ENST00000620514 CLEC18CQ8NCF0 446 aa16.34■□□□□ 0.21
HMGN3-203ENST00000620514 GABPB2Q8TAK5 448 aaPredicted RBP16.34■□□□□ 0.21
HMGN3-203ENST00000620514 MCOLN3Q8TDD5 553 aa16.34■□□□□ 0.21
HMGN3-203ENST00000620514 RERGQ96A58 199 aaPredicted RBP16.34■□□□□ 0.21
HMGN3-203ENST00000620514 PNPLA2Q96AD5 504 aa16.34■□□□□ 0.21
HMGN3-203ENST00000620514 NACC2Q96BF6 587 aa16.34■□□□□ 0.21
HMGN3-203ENST00000620514 MIEF2Q96C03 454 aa16.34■□□□□ 0.21
HMGN3-203ENST00000620514 LINGO1Q96FE5 620 aa16.34■□□□□ 0.21
HMGN3-203ENST00000620514 SLAMF7Q9NQ25 335 aa16.34■□□□□ 0.21
HMGN3-203ENST00000620514 CCDC177Q9NQR7 707 aaPredicted RBP16.34■□□□□ 0.21
HMGN3-203ENST00000620514 SEMA3GQ9NS98 782 aa16.34■□□□□ 0.21
HMGN3-203ENST00000620514 UTP6Q9NYH9 597 aaKnown RBP16.34■□□□□ 0.21
HMGN3-203ENST00000620514 ZNF282Q9UDV7 671 aaPredicted RBP16.34■□□□□ 0.21
HMGN3-203ENST00000620514 SH2B3Q9UQQ2 575 aa16.34■□□□□ 0.21
HMGN3-203ENST00000620514 MDC1Q14676 2089 aaKnown RBP16.34■□□□□ 0.21
HMGN3-203ENST00000620514 TP73O15350 636 aa16.33■□□□□ 0.2
HMGN3-203ENST00000620514 FOXS1O43638 330 aa16.33■□□□□ 0.2
HMGN3-203ENST00000620514 TSPAN12O95859 305 aa16.33■□□□□ 0.2
HMGN3-203ENST00000620514 C8GP07360 202 aa16.33■□□□□ 0.2
HMGN3-203ENST00000620514 PHKG1Q16816 387 aa16.33■□□□□ 0.2
HMGN3-203ENST00000620514 PRAMEF13Q5VWM6 474 aa16.33■□□□□ 0.2
HMGN3-203ENST00000620514 STEAP4Q687X5 459 aa16.33■□□□□ 0.2
HMGN3-203ENST00000620514 LRRC8EQ6NSJ5 796 aa16.33■□□□□ 0.2
HMGN3-203ENST00000620514 ANKMY2Q8IV38 441 aa16.33■□□□□ 0.2
HMGN3-203ENST00000620514 PARP9Q8IXQ6 854 aa16.33■□□□□ 0.2
HMGN3-203ENST00000620514 MYO1HQ8N1T3 1032 aa16.33■□□□□ 0.2
HMGN3-203ENST00000620514 GPATCH11Q8N954 259 aa16.33■□□□□ 0.2
HMGN3-203ENST00000620514 OR11G2Q8NGC1 345 aa16.33■□□□□ 0.2
HMGN3-203ENST00000620514 C8orf44Q96CB5 159 aa16.33■□□□□ 0.2
HMGN3-203ENST00000620514 CCDC138Q96M89 665 aa16.33■□□□□ 0.2
HMGN3-203ENST00000620514 RUNDC3BQ96NL0 473 aa16.33■□□□□ 0.2
HMGN3-203ENST00000620514 YIPF2Q9BWQ6 316 aa16.33■□□□□ 0.2
HMGN3-203ENST00000620514 ATG10Q9H0Y0 220 aa16.33■□□□□ 0.2
HMGN3-203ENST00000620514 PARVBQ9HBI1 364 aa16.33■□□□□ 0.2
HMGN3-203ENST00000620514 C3orf18Q9UK00 162 aa16.33■□□□□ 0.2
HMGN3-203ENST00000620514 MRPS2Q9Y399 296 aaKnown RBP16.33■□□□□ 0.2
HMGN3-203ENST00000620514 TEX264Q9Y6I9 313 aa16.33■□□□□ 0.2
HMGN3-203ENST00000620514 SHANK1Q9Y566 2161 aa16.33■□□□□ 0.2
HMGN3-203ENST00000620514 DOPEY2Q9Y3R5 2298 aa16.33■□□□□ 0.2
HMGN3-203ENST00000620514 IGLV3-12A0A075B6K2 115 aa16.32■□□□□ 0.2
HMGN3-203ENST00000620514 A0A0A6YYC8 382 aaPredicted RBP16.32■□□□□ 0.2
HMGN3-203ENST00000620514 I3L1I5 382 aaPredicted RBP16.32■□□□□ 0.2
HMGN3-203ENST00000620514 VPS4BO75351 444 aa16.32■□□□□ 0.2
HMGN3-203ENST00000620514 SEC31AO94979 1220 aaKnown RBP16.32■□□□□ 0.2
HMGN3-203ENST00000620514 ALPPP05187 535 aa16.32■□□□□ 0.2
HMGN3-203ENST00000620514 MRPS25P82663 173 aaKnown RBP16.32■□□□□ 0.2
HMGN3-203ENST00000620514 RELAQ04206 551 aa16.32■□□□□ 0.2
HMGN3-203ENST00000620514 Q0VFX4 171 aa16.32■□□□□ 0.2
HMGN3-203ENST00000620514 PTPN13Q12923 2485 aa16.32■□□□□ 0.2
HMGN3-203ENST00000620514 DSG2Q14126 1118 aa16.32■□□□□ 0.2
HMGN3-203ENST00000620514 HIF1AQ16665 826 aa16.32■□□□□ 0.2
HMGN3-203ENST00000620514 SYT16Q17RD7 645 aa16.32■□□□□ 0.2
HMGN3-203ENST00000620514 TUBB8Q3ZCM7 444 aa16.32■□□□□ 0.2
HMGN3-203ENST00000620514 HECTD2Q5U5R9 776 aa16.32■□□□□ 0.2
HMGN3-203ENST00000620514 GARNL3Q5VVW2 1013 aa16.32■□□□□ 0.2
HMGN3-203ENST00000620514 AGTRAPQ6RW13 159 aa16.32■□□□□ 0.2
HMGN3-203ENST00000620514 IGFL3Q6UXB1 125 aa16.32■□□□□ 0.2
HMGN3-203ENST00000620514 GALNT7Q86SF2 657 aa16.32■□□□□ 0.2
HMGN3-203ENST00000620514 AMER3Q8N944 861 aa16.32■□□□□ 0.2
HMGN3-203ENST00000620514 GALNT11Q8NCW6 608 aa16.32■□□□□ 0.2
HMGN3-203ENST00000620514 ANP32BQ92688 251 aaKnown RBP16.32■□□□□ 0.2
HMGN3-203ENST00000620514 ALKBH8Q96BT7 664 aaKnown RBP16.32■□□□□ 0.2
HMGN3-203ENST00000620514 C19orf60Q96EN9 201 aa16.32■□□□□ 0.2
HMGN3-203ENST00000620514 MMABQ96EY8 250 aaPredicted RBP16.32■□□□□ 0.2
HMGN3-203ENST00000620514 OLFM1Q99784 485 aa16.32■□□□□ 0.2
HMGN3-203ENST00000620514 TMEM184CQ9NVA4 438 aa16.32■□□□□ 0.2
HMGN3-203ENST00000620514 TRPC4Q9UBN4 977 aa16.32■□□□□ 0.2
HMGN3-203ENST00000620514 VPS4AQ9UN37 437 aa16.32■□□□□ 0.2
HMGN3-203ENST00000620514 CDC14AQ9UNH5 594 aa16.32■□□□□ 0.2
HMGN3-203ENST00000620514 CCDC188H7C350 402 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms