RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 KRT78Q8N1N4 520 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 DCBLD1Q8N8Z6 715 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 OR10G6Q8NH81 332 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 RFWD2Q8NHY2 731 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 AGR3Q8TD06 166 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 BCAS4Q8TDM0 211 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 RHBDD1Q8TEB9 315 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 RSC1A1Q92681 617 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 NAT6Q93015 286 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 UBE2E3Q969T4 207 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 ZUFSPQ96AP4 578 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 KCNA7Q96RP8 456 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 CCT7Q99832 543 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 AIF1LQ9BQI0 150 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 SIKE1Q9BRV8 207 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 EFCAB11Q9BUY7 163 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 SLC29A3Q9BZD2 475 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 PITHD1Q9GZP4 211 aaPredicted RBP7.72□□□□□ -1.17
CPNE3-209ENST00000620393 FAM107BQ9H098 131 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 ABCG4Q9H172 646 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 RABEP2Q9H5N1 569 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 NT5DC2Q9H857 520 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 KCNK13Q9HB14 408 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 PARD6AQ9NPB6 346 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 TMEM9BQ9NQ34 198 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 PFDN4Q9NQP4 134 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 EVA1BQ9NVM1 165 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 CUEDC1Q9NWM3 386 aaPredicted RBP7.72□□□□□ -1.17
CPNE3-209ENST00000620393 GEMIN8Q9NWZ8 242 aaKnown RBP7.72□□□□□ -1.17
CPNE3-209ENST00000620393 KLHL14Q9P2G3 628 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 MARCOQ9UEW3 520 aaPredicted RBP7.72□□□□□ -1.17
CPNE3-209ENST00000620393 ZNF490Q9ULM2 529 aaPredicted RBP7.72□□□□□ -1.17
CPNE3-209ENST00000620393 SH2B3Q9UQQ2 575 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 BTBD3Q9Y2F9 522 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 TSC22D4Q9Y3Q8 395 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 PCDHGA11Q9Y5H2 935 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 KLK4Q9Y5K2 254 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 DNAJC15Q9Y5T4 150 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 USH1CQ9Y6N9 552 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 CABIN1Q9Y6J0 2220 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 KMT2EQ8IZD2 1858 aa7.72□□□□□ -1.17
CPNE3-209ENST00000620393 IGKV1-8A0A0C4DH67 115 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 SERTM1A2A2V5 107 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 GSAPA4D1B5 854 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 TRPC5OSA6NMA1 111 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 MANBAO00462 879 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 FLRT2O43155 660 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 LDOC1O95751 146 aaPredicted RBP7.71□□□□□ -1.18
CPNE3-209ENST00000620393 CHEK2O96017 543 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 CD59P13987 128 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 CD1CP29017 333 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 HMOX2P30519 316 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 GRIA3P42263 894 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 CAPZBP47756 277 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 LSSP48449 732 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 IDH3AP50213 366 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 ARFIP2P53365 341 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 AQP5P55064 265 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 INHBCP55103 352 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 BTKQ06187 659 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 ZNF33BQ06732 778 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 SLBPQ14493 270 aaKnown RBP eCLIP7.71□□□□□ -1.18
CPNE3-209ENST00000620393 C10orf62Q5T681 223 aaPredicted RBP7.71□□□□□ -1.18
CPNE3-209ENST00000620393 NKAIN2Q5VXU1 208 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 FRG2Q64ET8 278 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 ZNF425Q6IV72 752 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 MED27Q6P2C8 311 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 FBXO42Q6P3S6 717 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 GUSBP11Q6P575 273 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 FIGLAQ6QHK4 219 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 SPESP1Q6UW49 350 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 TMIGD1Q6UXZ0 262 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 RNF165Q6ZSG1 346 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 USP53Q70EK8 1073 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 MAVSQ7Z434 540 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 TRIM46Q7Z4K8 759 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 SPATA21Q7Z572 469 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 TMPRSS11BQ86T26 416 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 PAQR7Q86WK9 346 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 MYLK4Q86YV6 388 aaPredicted RBP7.71□□□□□ -1.18
CPNE3-209ENST00000620393 LAS2Q8IYD9 372 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 Q8N9G6 341 aaPredicted RBP7.71□□□□□ -1.18
CPNE3-209ENST00000620393 OR7G3Q8NG95 312 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 TWIST2Q8WVJ9 160 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 CCT6BQ92526 530 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 NCSTNQ92542 709 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 USP7Q93009 1102 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 CCDC74AQ96AQ1 378 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 REPS1Q96D71 796 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 THOC1Q96FV9 657 aaKnown RBP7.71□□□□□ -1.18
CPNE3-209ENST00000620393 ZDHHC12Q96GR4 267 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 AHCYL2Q96HN2 611 aaKnown RBP7.71□□□□□ -1.18
CPNE3-209ENST00000620393 FRG2BQ96QU4 278 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 PLCD4Q9BRC7 762 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 DPH7Q9BTV6 452 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 EDEM2Q9BV94 578 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 SARGQ9BW04 601 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 NUF2Q9BZD4 464 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 TUBB1Q9H4B7 451 aa7.71□□□□□ -1.18
CPNE3-209ENST00000620393 ELOVL6Q9H5J4 265 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms