RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 PEBP1P30086 187 aaKnown RBP6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 SDC4P31431 198 aa6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 COMPP49747 757 aaPredicted RBP6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 ITGA8P53708 1063 aa6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 CASP9P55211 416 aa6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 SNX16P57768 344 aa6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 TPI1P60174 286 aa6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 GTF2H3Q13889 308 aa6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 TAZQ16635 292 aa6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 CA9Q16790 459 aa6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 TMEM249Q2WGJ8 235 aa6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 ANKRD20A8PQ5CZ79 823 aa6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 PLAG1Q6DJT9 500 aa6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 SCYL2Q6P3W7 929 aa6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 TMEM205Q6UW68 189 aa6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 CENPQQ7L2Z9 268 aaPredicted RBP6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 DET1Q7L5Y6 550 aa6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 ATG4DQ86TL0 474 aaPredicted RBP6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 WFDC3Q8IUB2 231 aa6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 ELOA2Q8IYF1 753 aaPredicted RBP6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 NDUFAF2Q8N183 169 aa6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 HORMAD2Q8N7B1 307 aa6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 LMNTD1Q8N9Z9 388 aa6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 ZFP62Q8NB50 900 aaPredicted RBP6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 POGLUT1Q8NBL1 392 aa6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 LINC00301Q8NCQ3 95 aa6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 BHLHE22Q8NFJ8 381 aaPredicted RBP6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 CENPIQ92674 756 aaPredicted RBP6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 LRRC46Q96FV0 321 aa6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 RBM41Q96IZ5 413 aaKnown RBP6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 SPATA32Q96LK8 384 aa6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 LYSMD1Q96S90 227 aa6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 ZFYVE21Q9BQ24 234 aa6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 HGH1Q9BTY7 390 aa6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 YIPF2Q9BWQ6 316 aa6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 TDRD1Q9BXT4 1180 aaKnown RBP6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 CHRNA10Q9GZZ6 450 aa6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 CDCP1Q9H5V8 836 aa6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 NT5MQ9NPB1 228 aa6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 DEPPQ9NTK1 212 aa6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 TMEM51Q9NW97 253 aa6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 ARMCX3Q9UH62 379 aaPredicted RBP6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 FOXD3Q9UJU5 478 aaPredicted RBP6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 FZD10Q9ULW2 581 aa6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 ICKQ9UPZ9 632 aa6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 SHOC2Q9UQ13 582 aa6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 EPN1Q9Y6I3 576 aaPredicted RBP6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 MORC2Q9Y6X9 1032 aaPredicted RBP6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 COLEC10Q9Y6Z7 277 aa6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 KIAA1549Q9HCM3 1950 aa6.39□□□□□ -1.39
SCAMP1-206ENST00000618166 ZNF407Q9C0G0 2248 aa6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 RGSL1A5PLK6 1076 aa6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 C2CD4BA6NLJ0 364 aa6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 HSPB2A8KAH6 182 aa6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 GAPDHSO14556 408 aaPredicted RBP6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 BCKDKO14874 412 aa6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 CELA3AP09093 270 aa6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 FBLP22087 321 aaKnown RBP6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 NDUFS1P28331 727 aa6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 ZNF136P52737 540 aa6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 AP2B1P63010 937 aa6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 ACTG1P63261 375 aa6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 OCRLQ01968 901 aa6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 TAP2Q03519 686 aa6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 TRIM14Q14142 442 aa6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 HSPB2Q16082 182 aa6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 SYT16Q17RD7 645 aa6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 FAM120AOSQ5T036 256 aa6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 FNBP1LQ5T0N5 605 aa6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 FAM182AQ5T1J6 154 aa6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 UNC5AQ6ZN44 842 aa6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 KIAA0408Q6ZU52 694 aa6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 PLEKHM3Q6ZWE6 761 aa6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 ABHD13Q7L211 337 aa6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 OTOAQ7RTW8 1153 aa6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 MDGA2Q7Z553 956 aa6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 RAVER1Q8IY67 606 aaKnown RBP6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 CCHCR1Q8TD31 782 aa6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 CREB3L4Q8TEY5 395 aa6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 TMEM171Q8WVE6 324 aa6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 TUBGCP2Q9BSJ2 902 aa6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 TMPRSS13Q9BYE2 586 aa6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 THAP2Q9H0W7 228 aa6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 EPB41L4BQ9H329 900 aa6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 TFB2MQ9H5Q4 396 aaKnown RBP6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 CHODLQ9H9P2 273 aa6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.38□□□□□ -1.396e-7■■■■□ 25.9
SCAMP1-206ENST00000618166 TRPC4Q9UBN4 977 aa6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 ACAD8Q9UKU7 415 aa6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 DSCAMO60469 2012 aa6.38□□□□□ -1.39
SCAMP1-206ENST00000618166 A0A0G2JMM0 328 aa6.37□□□□□ -1.39
SCAMP1-206ENST00000618166 A0A1W2PPB8 328 aa6.37□□□□□ -1.39
SCAMP1-206ENST00000618166 A0A1W2PRS3 328 aa6.37□□□□□ -1.39
SCAMP1-206ENST00000618166 KIR3DP1A8MWS1 328 aa6.37□□□□□ -1.39
SCAMP1-206ENST00000618166 UBFD1O14562 309 aaKnown RBP6.37□□□□□ -1.39
SCAMP1-206ENST00000618166 CASKO14936 926 aa6.37□□□□□ -1.39
SCAMP1-206ENST00000618166 PMM2O15305 246 aa6.37□□□□□ -1.39
SCAMP1-206ENST00000618166 NRP2O60462 931 aa6.37□□□□□ -1.39
SCAMP1-206ENST00000618166 KCNJ13O60928 360 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms