RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 THOC3Q96J01 351 aaKnown RBP10.59□□□□□ -0.71
POLR2A-209ENST00000617998 NSMCE2Q96MF7 247 aa10.59□□□□□ -0.71
POLR2A-209ENST00000617998 TAAR9Q96RI9 348 aa10.59□□□□□ -0.71
POLR2A-209ENST00000617998 SDCBP2Q9H190 292 aa10.59□□□□□ -0.71
POLR2A-209ENST00000617998 ATP6AP2A0A1C7CYW4 349 aa10.59□□□□□ -0.71
POLR2A-209ENST00000617998 ATP6AP2O75787 350 aa10.59□□□□□ -0.71
POLR2A-209ENST00000617998 AOC1P19801 751 aa10.59□□□□□ -0.71
POLR2A-209ENST00000617998 NAGLUP54802 743 aa10.59□□□□□ -0.71
POLR2A-209ENST00000617998 RPS14P62263 151 aaKnown RBP10.59□□□□□ -0.71
POLR2A-209ENST00000617998 CDK3Q00526 305 aa10.59□□□□□ -0.71
POLR2A-209ENST00000617998 CD47Q08722 323 aa10.59□□□□□ -0.71
POLR2A-209ENST00000617998 C1orf94Q6P1W5 598 aa10.59□□□□□ -0.71
POLR2A-209ENST00000617998 ZNF730Q6ZMV8 503 aa10.59□□□□□ -0.71
POLR2A-209ENST00000617998 TMEM26Q6ZUK4 368 aa10.59□□□□□ -0.71
POLR2A-209ENST00000617998 PARS2Q7L3T8 475 aaKnown RBP10.59□□□□□ -0.71
POLR2A-209ENST00000617998 OR5T3Q8NGG3 340 aa10.59□□□□□ -0.71
POLR2A-209ENST00000617998 EBPLQ9BY08 206 aa10.59□□□□□ -0.71
POLR2A-209ENST00000617998 FAM237BA0A1B0GVD1 139 aa10.59□□□□□ -0.71
POLR2A-209ENST00000617998 TMEM120BA0PK00 339 aa10.59□□□□□ -0.71
POLR2A-209ENST00000617998 F3P13726 295 aa10.59□□□□□ -0.71
POLR2A-209ENST00000617998 CA9Q16790 459 aa10.59□□□□□ -0.71
POLR2A-209ENST00000617998 TRIM73Q86UV7 250 aa10.59□□□□□ -0.71
POLR2A-209ENST00000617998 DTX3LQ8TDB6 740 aa10.59□□□□□ -0.71
POLR2A-209ENST00000617998 IKZF2Q9UKS7 526 aa10.59□□□□□ -0.71
POLR2A-209ENST00000617998 RGPD2P0DJD1 1756 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 SERPINA3P01011 423 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 POU3F2P20265 443 aaPredicted RBP10.58□□□□□ -0.72
POLR2A-209ENST00000617998 PGM1P36871 562 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 HK3P52790 923 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 TGFBR3Q03167 851 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 EPS8Q12929 822 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 QPCTQ16769 361 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 FAM98BQ52LJ0 330 aaKnown RBP10.58□□□□□ -0.72
POLR2A-209ENST00000617998 PLEKHS1Q5SXH7 462 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 AGTRAPQ6RW13 159 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 GCNT7Q6ZNI0 430 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 MCATQ8IVS2 390 aaKnown RBP10.58□□□□□ -0.72
POLR2A-209ENST00000617998 DNAAF1Q8NEP3 725 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 CDC42EP4Q9H3Q1 356 aaKnown RBP10.58□□□□□ -0.72
POLR2A-209ENST00000617998 TCF7L2Q9NQB0 619 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 TOR1BO14657 336 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 RAD1O60671 282 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 ABLIM3O94929 683 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 CHRM1P11229 460 aaPredicted RBP10.58□□□□□ -0.72
POLR2A-209ENST00000617998 MTHFD2P13995 350 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 ZNF84P51523 738 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 CLCN2P51788 898 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 HTRA4P83105 476 aaPredicted RBP10.58□□□□□ -0.72
POLR2A-209ENST00000617998 SLC39A4Q6P5W5 647 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 NEK10Q6ZWH5 1172 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 OAFQ86UD1 273 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 C9orf43Q8TAL5 461 aaPredicted RBP10.58□□□□□ -0.72
POLR2A-209ENST00000617998 NPY6RQ99463 290 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 CDH20Q9HBT6 801 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 XPR1Q9UBH6 696 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 VGLL3A8MV65 326 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 HCRTR2O43614 444 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 NIPSNAP2O75323 286 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 CRYABP02511 175 aaKnown RBP10.58□□□□□ -0.72
POLR2A-209ENST00000617998 ZNF23P17027 643 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 HTR4Q13639 388 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 SLC30A6Q6NXT4 461 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 KIAA0408Q6ZU52 694 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 PSKH2Q96QS6 385 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 PCDHB18PQ96TA0 734 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 SNX11Q9Y5W9 270 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 COPG1Q9Y678 874 aaKnown RBP10.58□□□□□ -0.72
POLR2A-209ENST00000617998 ARHGEF33A8MVX0 844 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 C8orf89P0DMQ9 161 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 CSNK2BP67870 215 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 KRR1Q13601 381 aaKnown RBP10.58□□□□□ -0.72
POLR2A-209ENST00000617998 DNAL1Q4LDG9 190 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 TMEM35AQ53FP2 167 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 PRMT9Q6P2P2 845 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 ARPINQ7Z6K5 226 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 GPR137CQ8N3F9 429 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 RCBTB1Q8NDN9 531 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 ECHDC3Q96DC8 303 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 OGFRQ9NZT2 677 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 RPS6KA6Q9UK32 745 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 ATXN7L1Q9ULK2 861 aaPredicted RBP10.58□□□□□ -0.72
POLR2A-209ENST00000617998 BTBD17A6NE02 478 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 EPHB6O15197 1021 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 PCDH7O60245 1069 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 SOX6P35712 828 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 KIR3DL1P43629 444 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 CCR5P51681 352 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 HSD11B2P80365 405 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 MPP1Q00013 466 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 NFE2L1Q14494 772 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 PTGES3Q15185 160 aaKnown RBP10.58□□□□□ -0.72
POLR2A-209ENST00000617998 PTCHD3Q3KNS1 767 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 OPN5Q6U736 354 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 FGF21Q9NSA1 209 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 ZCCHC3Q9NUD5 404 aaKnown RBP10.58□□□□□ -0.72
POLR2A-209ENST00000617998 POT1Q9NUX5 634 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 RIMKLBQ9ULI2 386 aa10.58□□□□□ -0.72
POLR2A-209ENST00000617998 A6NLC8 198 aa10.57□□□□□ -0.72
POLR2A-209ENST00000617998 GPR89AB7ZAQ6 455 aa10.57□□□□□ -0.72
POLR2A-209ENST00000617998 F10P00742 488 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms