RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 GIMAP2Q9UG22 337 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 TMEM131LA2VDJ0 1609 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 DUXAA6NLW8 204 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 ENPP3O14638 875 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 TACSTD2P09758 323 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 TFPIP10646 304 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 IDSP22304 550 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 F8A1P23610 371 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 ACVR2AP27037 513 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 RFC2P35250 354 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 LAPTM4AQ15012 233 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 PLA2G4EQ3MJ16 856 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 SPIN4Q56A73 249 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 PIGGQ5H8A4 983 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 SIRPB2Q5JXA9 342 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 RPS27LQ71UM5 84 aaKnown RBP10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 KBTBD6Q86V97 674 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 OR8J3Q8NGG0 315 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 CNIH3Q8TBE1 160 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 LRCH3Q96II8 777 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 PRICKLE1Q96MT3 831 aaPredicted RBP10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 NDC1Q9BTX1 674 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 FUNDC2Q9BWH2 189 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 BTBD1Q9H0C5 482 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 MOCS1Q9NZB8 636 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 P2RX2Q9UBL9 471 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 FCF1Q9Y324 198 aaKnown RBP10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 PTPRJQ12913 1337 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 CENPBD1B2RD01 187 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 OR1I1O60431 355 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 MMP3P08254 477 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 EPCAMP16422 314 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 MAP2K3P46734 347 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 DIO3P55073 304 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 CDH11P55287 796 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 ZNF33AQ06730 810 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 HNRNPA0Q13151 305 aaKnown RBP10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 PPP1R3AQ16821 1122 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 ZNF630Q2M218 657 aaPredicted RBP10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 ATXN7L2Q5T6C5 722 aaPredicted RBP10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 C9orf131Q5VYM1 1079 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 LBX2Q6XYB7 198 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 CLEC20AQ6ZU45 233 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 ZNF598Q86UK7 904 aaKnown RBP10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 IQCHQ86VS3 1027 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 PIAS4Q8N2W9 510 aaPredicted RBP10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 ZNF676Q8N7Q3 588 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 OR2L5Q8NG80 312 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 OR2L3Q8NG85 312 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 NKD1Q969G9 470 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 PRR11Q96HE9 360 aaPredicted RBP10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 ZSCAN5AQ9BUG6 496 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 RANBP3Q9H6Z4 567 aaPredicted RBP10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 CPNE5Q9HCH3 593 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 ERVK-18Q9QC07 812 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 CD84Q9UIB8 345 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 MANBAO00462 879 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 RAB36O95755 333 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 OAS1P00973 400 aaKnown RBP10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 MT-ND2P03891 347 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 MAP2K4P45985 399 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 OR3A3P47888 321 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 OR3A2P47893 321 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 GABARAPL2P60520 117 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 UGT8Q16880 541 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 FAM76BQ5HYJ3 339 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 GPR142Q7Z601 462 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 SNX29P2Q8IUI4 249 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 KCNA7Q96RP8 456 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 TXLNGYQ9BZA5 131 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 C14orf119Q9NWQ9 140 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 UBQLN2Q9UHD9 624 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 MRPS23Q9Y3D9 190 aaKnown RBP10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 PRSS51A0A1B0GVH4 220 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 ZNF487B1APH4 448 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 NEDD8-MDP1E9PL57 170 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 PPEF2O14830 753 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 RBMXL2O75526 392 aaKnown RBP10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 ANXA3P12429 323 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 KELP23276 732 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 MYF6P23409 242 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 GSTM2P28161 218 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 AVPR1BP47901 424 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 PLA2G16P53816 162 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 CDKL1Q00532 357 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 GALNT2Q10471 571 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 MAP2K5Q13163 448 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 POMZP3Q6PJE2 187 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 TMEM220Q6QAJ8 160 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 HACD2Q6Y1H2 254 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 MBOAT1Q6ZNC8 495 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 GOLGA7Q7Z5G4 137 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 CILP2Q8IUL8 1156 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 SLC15A4Q8N697 577 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 C1orf52Q8N6N3 182 aaKnown RBP10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 C2CD4AQ8NCU7 369 aaPredicted RBP10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 UPF1Q92900 1129 aaKnown RBP eCLIP10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 PTPN18Q99952 460 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 OSER1Q9NX31 292 aa10.38□□□□□ -0.75
CLTCL1-209ENST00000617103 MED31Q9Y3C7 131 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms