RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 ZNF570Q96NI8 536 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 OR52E6Q96RD3 313 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 CCT7Q99832 543 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 TBCDQ9BTW9 1192 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 PHF7Q9BWX1 381 aaPredicted RBP7.52□□□□□ -1.21
NEK3-207ENST00000617054 FOXQ1Q9C009 403 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 TMEM168Q9H0V1 697 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 DPEP2Q9H4A9 486 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 GEMIN8Q9NWZ8 242 aaKnown RBP7.52□□□□□ -1.21
NEK3-207ENST00000617054 NDE1Q9NXR1 346 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 GPRC5BQ9NZH0 403 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 ZIM2Q9NZV7 527 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 STOML1Q9UBI4 398 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 VPS29Q9UBQ0 182 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 ERVK-11Q9UQG0 969 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 BTBD3Q9Y2F9 522 aa7.52□□□□□ -1.21
NEK3-207ENST00000617054 HEATR5BQ9P2D3 2071 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 A0A0G2JN53 185 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 ZNF839A8K0R7 811 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 RTCAO00442 366 aaKnown RBP7.51□□□□□ -1.21
NEK3-207ENST00000617054 EEDO75530 441 aaKnown RBP7.51□□□□□ -1.21
NEK3-207ENST00000617054 LMNAP02545 664 aaKnown RBP7.51□□□□□ -1.21
NEK3-207ENST00000617054 ATP6V1B2P21281 511 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 CDKN2CP42773 168 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 HKDC1Q2TB90 917 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 LRIT3Q3SXY7 679 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 LIPJQ5W064 366 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 OR4F3Q6IEY1 312 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 DHDDSQ86SQ9 333 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 MMP21Q8N119 569 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 OR5K2Q8NHB8 316 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 MAGEC3Q8TD91 643 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 PATE1Q8WXA2 126 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 OR1E3Q8WZA6 343 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 SNX19Q92543 992 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 TMEM125Q96AQ2 219 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 SLC29A3Q9BZD2 475 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 BTBD1Q9H0C5 482 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 TCEAL2Q9H3H9 227 aaPredicted RBP7.51□□□□□ -1.21
NEK3-207ENST00000617054 CCDC177Q9NQR7 707 aaPredicted RBP7.51□□□□□ -1.21
NEK3-207ENST00000617054 TBC1D29Q9UFV1 150 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 YY2O15391 372 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 BCAS2O75934 225 aaPredicted RBP7.51□□□□□ -1.21
NEK3-207ENST00000617054 SERPIND1P05546 499 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 MC1RQ01726 317 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 LIPEQ05469 1076 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 UBXN2BQ14CS0 331 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 TAF11Q15544 211 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 TRIP10Q15642 601 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 MAPKAPK3Q16644 382 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 KIAA1161Q6NSJ0 714 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 TTC23LQ6PF05 361 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 ADCK2Q7Z695 626 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.51□□□□□ -1.21
NEK3-207ENST00000617054 OR10Q1Q8NGQ4 319 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 RAD51AP1Q96B01 352 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 MIEF2Q96C03 454 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 ROPN1LQ96C74 230 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 ASB9Q96DX5 294 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 CDX2Q99626 313 aaPredicted RBP7.51□□□□□ -1.21
NEK3-207ENST00000617054 C8orf33Q9H7E9 229 aaPredicted RBP7.51□□□□□ -1.21
NEK3-207ENST00000617054 GID8Q9NWU2 228 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 LEF1Q9UJU2 399 aaPredicted RBP7.51□□□□□ -1.21
NEK3-207ENST00000617054 AURKCQ9UQB9 309 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 PCDHA9Q9Y5H5 950 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 GNG14A0A1W2PPG7 69 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 PRSS38A1L453 326 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 PIPSLA2A3N6 862 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 CACNB4O00305 520 aaPredicted RBP7.51□□□□□ -1.21
NEK3-207ENST00000617054 PPM1DO15297 605 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 NVLO15381 856 aaKnown RBP7.51□□□□□ -1.21
NEK3-207ENST00000617054 RASGRP1O95267 797 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 MAOBP27338 520 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 GSK3BP49841 420 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 OR4D2P58180 307 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 RAE1P78406 368 aaKnown RBP7.51□□□□□ -1.21
NEK3-207ENST00000617054 MRPS21P82921 87 aaKnown RBP7.51□□□□□ -1.21
NEK3-207ENST00000617054 GGTA1PQ4G0N0 100 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 PRAMEF14Q5SWL7 426 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 PRAMEF13Q5VWM6 474 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 METTL2BQ6P1Q9 378 aaKnown RBP7.51□□□□□ -1.21
NEK3-207ENST00000617054 AMIGO2Q86SJ2 522 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 SYT12Q8IV01 421 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 HID1Q8IV36 788 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 MINDY1Q8N5J2 469 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 WDR48Q8TAF3 677 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 PNPT1Q8TCS8 783 aaKnown RBP7.51□□□□□ -1.21
NEK3-207ENST00000617054 CANT1Q8WVQ1 401 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 SLC13A3Q8WWT9 602 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 SLC5A11Q8WWX8 675 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 GTF2H4Q92759 462 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 TOE1Q96GM8 510 aaKnown RBP7.51□□□□□ -1.21
NEK3-207ENST00000617054 RSRC1Q96IZ7 334 aaKnown RBP7.51□□□□□ -1.21
NEK3-207ENST00000617054 PKP2Q99959 881 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 MENTQ9BUN1 341 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 THUMPD3Q9BV44 507 aaKnown RBP7.51□□□□□ -1.21
NEK3-207ENST00000617054 GPR174Q9BXC1 333 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 OCEL1Q9H607 264 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 LMAN1LQ9HAT1 526 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 SLC25A37Q9NYZ2 338 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms