RNA–Protein interactions for RNA: ENST00000615393.5

VEGFA-227, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 984 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-227ENST00000615393 OR2A5Q96R48 311 aa24.03■■□□□ 1.44
VEGFA-227ENST00000615393 PLAC1Q9HBJ0 212 aa24.03■■□□□ 1.44
VEGFA-227ENST00000615393 FBXL4Q9UKA2 621 aa24.03■■□□□ 1.44
VEGFA-227ENST00000615393 ADAMTS6Q9UKP5 1117 aa24.03■■□□□ 1.44
VEGFA-227ENST00000615393 PDE10AQ9Y233 779 aa24.03■■□□□ 1.44
VEGFA-227ENST00000615393 RUVBL1Q9Y265 456 aaKnown RBP24.03■■□□□ 1.44
VEGFA-227ENST00000615393 PABPN1LA6NDY0 278 aaKnown RBP24.02■■□□□ 1.44
VEGFA-227ENST00000615393 SOCS6O14544 535 aa24.02■■□□□ 1.44
VEGFA-227ENST00000615393 SORBS2O94875 1100 aaKnown RBP24.02■■□□□ 1.44
VEGFA-227ENST00000615393 TBPL1P62380 186 aa24.02■■□□□ 1.44
VEGFA-227ENST00000615393 FRG1Q14331 258 aaKnown RBP24.02■■□□□ 1.44
VEGFA-227ENST00000615393 HKDC1Q2TB90 917 aa24.02■■□□□ 1.44
VEGFA-227ENST00000615393 PRAMEF13Q5VWM6 474 aa24.02■■□□□ 1.44
VEGFA-227ENST00000615393 GPATCH11Q8N954 259 aa24.02■■□□□ 1.44
VEGFA-227ENST00000615393 STT3BQ8TCJ2 826 aa24.02■■□□□ 1.44
VEGFA-227ENST00000615393 CRB3Q9BUF7 120 aa24.02■■□□□ 1.44
VEGFA-227ENST00000615393 MFRPQ9BY79 579 aa24.02■■□□□ 1.44
VEGFA-227ENST00000615393 TRIM31Q9BZY9 425 aa24.02■■□□□ 1.44
VEGFA-227ENST00000615393 SLAMF7Q9NQ25 335 aa24.02■■□□□ 1.44
VEGFA-227ENST00000615393 CUEDC1Q9NWM3 386 aaPredicted RBP24.02■■□□□ 1.44
VEGFA-227ENST00000615393 SLC17A6Q9P2U8 582 aa24.02■■□□□ 1.44
VEGFA-227ENST00000615393 HS3ST3B1Q9Y662 390 aa24.02■■□□□ 1.44
VEGFA-227ENST00000615393 MYO18BQ8IUG5 2567 aa24.02■■□□□ 1.44
VEGFA-227ENST00000615393 EFCAB8A8MWE9 144 aa24.01■■□□□ 1.43
VEGFA-227ENST00000615393 H7BY64 318 aa24.01■■□□□ 1.43
VEGFA-227ENST00000615393 HAT1O14929 419 aa24.01■■□□□ 1.43
VEGFA-227ENST00000615393 HIST1H2AGP0C0S8 130 aaPredicted RBP24.01■■□□□ 1.43
VEGFA-227ENST00000615393 ZGLP1P0C6A0 271 aa24.01■■□□□ 1.43
VEGFA-227ENST00000615393 HIST1H2ADP20671 130 aa24.01■■□□□ 1.43
VEGFA-227ENST00000615393 IL2P60568 153 aa24.01■■□□□ 1.43
VEGFA-227ENST00000615393 DSG2Q14126 1118 aa24.01■■□□□ 1.43
VEGFA-227ENST00000615393 TUBB8Q3ZCM7 444 aa24.01■■□□□ 1.43
VEGFA-227ENST00000615393 HECTD2Q5U5R9 776 aa24.01■■□□□ 1.43
VEGFA-227ENST00000615393 SLC6A19Q695T7 634 aa24.01■■□□□ 1.43
VEGFA-227ENST00000615393 FAM45BPQ6NSW5 357 aa24.01■■□□□ 1.43
VEGFA-227ENST00000615393 TRMT10BQ6PF06 316 aaKnown RBP24.01■■□□□ 1.43
VEGFA-227ENST00000615393 RBMXL3Q8N7X1 1067 aaKnown RBP24.01■■□□□ 1.43
VEGFA-227ENST00000615393 FAM45AQ8TCE6 357 aa24.01■■□□□ 1.43
VEGFA-227ENST00000615393 TM9SF4Q92544 642 aa24.01■■□□□ 1.43
VEGFA-227ENST00000615393 PNPLA2Q96AD5 504 aa24.01■■□□□ 1.43
VEGFA-227ENST00000615393 HIST1H2AHQ96KK5 128 aa24.01■■□□□ 1.43
VEGFA-227ENST00000615393 PRAP1Q96NZ9 151 aa24.01■■□□□ 1.43
VEGFA-227ENST00000615393 KRT12Q99456 494 aa24.01■■□□□ 1.43
VEGFA-227ENST00000615393 HIST1H2AJQ99878 128 aa24.01■■□□□ 1.43
VEGFA-227ENST00000615393 WDR83Q9BRX9 315 aaKnown RBP24.01■■□□□ 1.43
VEGFA-227ENST00000615393 H2AFJQ9BTM1 129 aa24.01■■□□□ 1.43
VEGFA-227ENST00000615393 ZNF552Q9H707 407 aaPredicted RBP24.01■■□□□ 1.43
VEGFA-227ENST00000615393 TMEM184CQ9NVA4 438 aa24.01■■□□□ 1.43
VEGFA-227ENST00000615393 UBR5O95071 2799 aaPredicted RBP24■■□□□ 1.43
VEGFA-227ENST00000615393 CCDC88CQ9P219 2028 aa24■■□□□ 1.43
VEGFA-227ENST00000615393 MASP2O00187 686 aa24■■□□□ 1.43
VEGFA-227ENST00000615393 VPS4BO75351 444 aa24■■□□□ 1.43
VEGFA-227ENST00000615393 ANXA5P08758 320 aa24■■□□□ 1.43
VEGFA-227ENST00000615393 CCND1P24385 295 aa24■■□□□ 1.43
VEGFA-227ENST00000615393 ITGA3P26006 1051 aa24■■□□□ 1.43
VEGFA-227ENST00000615393 KLC1Q07866 573 aa24■■□□□ 1.43
VEGFA-227ENST00000615393 NDUFA9Q16795 377 aa24■■□□□ 1.43
VEGFA-227ENST00000615393 IRAK1BP1Q5VVH5 260 aa24■■□□□ 1.43
VEGFA-227ENST00000615393 AGTRAPQ6RW13 159 aa24■■□□□ 1.43
VEGFA-227ENST00000615393 KIRREL2Q6UWL6 708 aa24■■□□□ 1.43
VEGFA-227ENST00000615393 ANKMY2Q8IV38 441 aa24■■□□□ 1.43
VEGFA-227ENST00000615393 SYNPO2LQ9H987 977 aa24■■□□□ 1.43
VEGFA-227ENST00000615393 ZFATQ9P243 1243 aa24■■□□□ 1.43
VEGFA-227ENST00000615393 VPS4AQ9UN37 437 aa24■■□□□ 1.43
VEGFA-227ENST00000615393 VWA7Q9Y334 891 aa24■■□□□ 1.43
VEGFA-227ENST00000615393 PCM1Q15154 2024 aa24■■□□□ 1.43
VEGFA-227ENST00000615393 IGLV3-12A0A075B6K2 115 aa23.99■■□□□ 1.43
VEGFA-227ENST00000615393 FDXRP22570 491 aa23.99■■□□□ 1.43
VEGFA-227ENST00000615393 RPS15AP62244 130 aaKnown RBP23.99■■□□□ 1.43
VEGFA-227ENST00000615393 PDIA2Q13087 525 aaKnown RBP23.99■■□□□ 1.43
VEGFA-227ENST00000615393 PLD3Q8IV08 490 aa23.99■■□□□ 1.43
VEGFA-227ENST00000615393 BBOF1Q8ND07 529 aa23.99■■□□□ 1.43
VEGFA-227ENST00000615393 MMABQ96EY8 250 aaPredicted RBP23.99■■□□□ 1.43
VEGFA-227ENST00000615393 YIPF2Q9BWQ6 316 aa23.99■■□□□ 1.43
VEGFA-227ENST00000615393 DRC3Q9H069 523 aa23.99■■□□□ 1.43
VEGFA-227ENST00000615393 TRPC4Q9UBN4 977 aa23.99■■□□□ 1.43
VEGFA-227ENST00000615393 C3orf18Q9UK00 162 aa23.99■■□□□ 1.43
VEGFA-227ENST00000615393 VARSP26640 1264 aaKnown RBP23.98■■□□□ 1.43
VEGFA-227ENST00000615393 MGAT5Q09328 741 aa23.98■■□□□ 1.43
VEGFA-227ENST00000615393 NAE1Q13564 534 aa23.98■■□□□ 1.43
VEGFA-227ENST00000615393 IGFL3Q6UXB1 125 aa23.98■■□□□ 1.43
VEGFA-227ENST00000615393 MBOAT1Q6ZNC8 495 aa23.98■■□□□ 1.43
VEGFA-227ENST00000615393 C17orf64Q86WR6 236 aa23.98■■□□□ 1.43
VEGFA-227ENST00000615393 PRSS58Q8IYP2 241 aa23.98■■□□□ 1.43
VEGFA-227ENST00000615393 FBXO36Q8NEA4 188 aa23.98■■□□□ 1.43
VEGFA-227ENST00000615393 THAP11Q96EK4 314 aa23.98■■□□□ 1.43
VEGFA-227ENST00000615393 TRIM54Q9BYV2 358 aa23.98■■□□□ 1.43
VEGFA-227ENST00000615393 ATG10Q9H0Y0 220 aa23.98■■□□□ 1.43
VEGFA-227ENST00000615393 C14orf105Q9NVL8 296 aa23.98■■□□□ 1.43
VEGFA-227ENST00000615393 SNX24Q9Y343 169 aa23.98■■□□□ 1.43
VEGFA-227ENST00000615393 MAP4K5Q9Y4K4 846 aa23.98■■□□□ 1.43
VEGFA-227ENST00000615393 MAP2K7O14733 419 aa23.97■■□□□ 1.43
VEGFA-227ENST00000615393 TSPAN12O95859 305 aa23.97■■□□□ 1.43
VEGFA-227ENST00000615393 ACPPP15309 386 aa23.97■■□□□ 1.43
VEGFA-227ENST00000615393 SLC26A3P40879 764 aa23.97■■□□□ 1.43
VEGFA-227ENST00000615393 RPL21P46778 160 aaKnown RBP23.97■■□□□ 1.43
VEGFA-227ENST00000615393 AP1S2P56377 157 aa23.97■■□□□ 1.43
VEGFA-227ENST00000615393 FAM53BQ14153 422 aa23.97■■□□□ 1.43
VEGFA-227ENST00000615393 PHKG1Q16816 387 aa23.97■■□□□ 1.43
VEGFA-227ENST00000615393 VWA2Q5GFL6 755 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms