RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 ACSM2BQ68CK6 577 aa13.62□□□□□ -0.23
COL6A1-207ENST00000612273 BBS7Q8IWZ6 715 aa13.62□□□□□ -0.23
COL6A1-207ENST00000612273 SLC7A5P1Q8MH63 180 aa13.62□□□□□ -0.23
COL6A1-207ENST00000612273 GTPBP3Q969Y2 492 aaKnown RBP13.62□□□□□ -0.23
COL6A1-207ENST00000612273 FRG2BQ96QU4 278 aa13.62□□□□□ -0.23
COL6A1-207ENST00000612273 APOL4Q9BPW4 351 aa13.62□□□□□ -0.23
COL6A1-207ENST00000612273 CHCHD6Q9BRQ6 235 aa13.62□□□□□ -0.23
COL6A1-207ENST00000612273 C2orf49Q9BVC5 232 aaPredicted RBP13.62□□□□□ -0.23
COL6A1-207ENST00000612273 ATAD3AQ9NVI7 634 aa13.62□□□□□ -0.23
COL6A1-207ENST00000612273 USE1Q9NZ43 259 aa13.62□□□□□ -0.23
COL6A1-207ENST00000612273 SAMD4AQ9UPU9 718 aaKnown RBP13.62□□□□□ -0.23
COL6A1-207ENST00000612273 YIPF1Q9Y548 306 aa13.62□□□□□ -0.23
COL6A1-207ENST00000612273 MYO1DO94832 1006 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 KCNK5O95279 499 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 LHCGRP22888 699 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 HOXA9P31269 272 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 UGT8Q16880 541 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 TRAF7Q6Q0C0 670 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 SETD9Q8NE22 299 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 CLSTN3Q9BQT9 956 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 COPS4Q9BT78 406 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 DCSTAMPQ9H295 470 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 TPT1P8Q9HAU6 139 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 IL1RAPQ9NPH3 570 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 ACOT13Q9NPJ3 140 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 RAD18Q9NS91 495 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 ABCB8Q9NUT2 735 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 GPR83Q9NYM4 423 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 FZD4Q9ULV1 537 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 CASP8AP2Q9UKL3 1982 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 MYOFQ9NZM1 2061 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 FAM220BPB1ANY3 271 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 CCNDBP1O95273 360 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 ALOX12P18054 663 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 NRIP1P48552 1158 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 MEF2AQ02078 507 aaPredicted RBP13.61□□□□□ -0.23
COL6A1-207ENST00000612273 CAMK2GQ13555 558 aaPredicted RBP13.61□□□□□ -0.23
COL6A1-207ENST00000612273 OXA1LQ15070 435 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 CCSAPQ6IQ19 270 aaPredicted RBP13.61□□□□□ -0.23
COL6A1-207ENST00000612273 SHQ1Q6PI26 577 aaKnown RBP13.61□□□□□ -0.23
COL6A1-207ENST00000612273 HEATR4Q86WZ0 1026 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 C1orf52Q8N6N3 182 aaKnown RBP13.61□□□□□ -0.23
COL6A1-207ENST00000612273 NELL1Q92832 810 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 USP7Q93009 1102 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 NTMT1Q9BV86 223 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 CFAP97Q9P2B7 532 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 POU2F3Q9UKI9 436 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 OGDHLQ9ULD0 1010 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 TRBV5-3A0A0A0MS03 114 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 PCDH7O60245 1069 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 CYP7B1O75881 506 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 CCDC159P0C7I6 412 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 GADD45AP24522 165 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 PTPN6P29350 595 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 LMAN2Q12907 356 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 TOP3AQ13472 1001 aaPredicted RBP13.61□□□□□ -0.23
COL6A1-207ENST00000612273 DMC1Q14565 340 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 ZNF852Q6ZMS4 543 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 FEVQ99581 238 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 KLF16Q9BXK1 252 aaPredicted RBP13.61□□□□□ -0.23
COL6A1-207ENST00000612273 KCTD5Q9NXV2 234 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 TRPS1Q9UHF7 1281 aa13.61□□□□□ -0.23
COL6A1-207ENST00000612273 E7EQ34 232 aa13.6□□□□□ -0.23
COL6A1-207ENST00000612273 J3KTA2 159 aa13.6□□□□□ -0.23
COL6A1-207ENST00000612273 AIREO43918 545 aa13.6□□□□□ -0.23
COL6A1-207ENST00000612273 GABARAPO95166 117 aa13.6□□□□□ -0.23
COL6A1-207ENST00000612273 DNAJA1P31689 397 aaKnown RBP13.6□□□□□ -0.23
COL6A1-207ENST00000612273 RCVRNP35243 200 aa13.6□□□□□ -0.23
COL6A1-207ENST00000612273 NSG1P42857 185 aa13.6□□□□□ -0.23
COL6A1-207ENST00000612273 CDH12P55289 794 aa13.6□□□□□ -0.23
COL6A1-207ENST00000612273 NPRL3Q12980 569 aa13.6□□□□□ -0.23
COL6A1-207ENST00000612273 VEPH1Q14D04 833 aa13.6□□□□□ -0.23
COL6A1-207ENST00000612273 MAD2L1BPQ15013 274 aaPredicted RBP13.6□□□□□ -0.23
COL6A1-207ENST00000612273 Q6ZVU0 165 aa13.6□□□□□ -0.23
COL6A1-207ENST00000612273 RAVER1Q8IY67 606 aaKnown RBP13.6□□□□□ -0.23
COL6A1-207ENST00000612273 NAGSQ8N159 534 aa13.6□□□□□ -0.23
COL6A1-207ENST00000612273 FAM83FQ8NEG4 500 aaPredicted RBP13.6□□□□□ -0.23
COL6A1-207ENST00000612273 SORCS1Q8WY21 1168 aa13.6□□□□□ -0.23
COL6A1-207ENST00000612273 PLD4Q96BZ4 506 aa13.6□□□□□ -0.23
COL6A1-207ENST00000612273 PPP1R14BQ96C90 147 aa13.6□□□□□ -0.23
COL6A1-207ENST00000612273 RDH12Q96NR8 316 aa13.6□□□□□ -0.23
COL6A1-207ENST00000612273 ZNF334Q9HCZ1 680 aaPredicted RBP13.6□□□□□ -0.23
COL6A1-207ENST00000612273 AKIP1Q9NQ31 210 aa13.6□□□□□ -0.23
COL6A1-207ENST00000612273 GIN1Q9NXP7 522 aa13.6□□□□□ -0.23
COL6A1-207ENST00000612273 SOBPA7XYQ1 873 aa13.6□□□□□ -0.23
COL6A1-207ENST00000612273 ETHE1O95571 254 aa13.6□□□□□ -0.23
COL6A1-207ENST00000612273 STSP08842 583 aa13.6□□□□□ -0.23
COL6A1-207ENST00000612273 AOAHP28039 575 aa13.6□□□□□ -0.23
COL6A1-207ENST00000612273 SERPINA4P29622 427 aa13.6□□□□□ -0.23
COL6A1-207ENST00000612273 SERPINB10P48595 397 aa13.6□□□□□ -0.23
COL6A1-207ENST00000612273 GZMMP51124 257 aa13.6□□□□□ -0.23
COL6A1-207ENST00000612273 GSTM4Q03013 218 aa13.6□□□□□ -0.23
COL6A1-207ENST00000612273 LRRC74AQ0VAA2 488 aa13.6□□□□□ -0.23
COL6A1-207ENST00000612273 Q6ZVL8 140 aa13.6□□□□□ -0.23
COL6A1-207ENST00000612273 C11orf74Q86VG3 221 aa13.6□□□□□ -0.23
COL6A1-207ENST00000612273 CHST14Q8NCH0 376 aa13.6□□□□□ -0.23
COL6A1-207ENST00000612273 Q96MT0 163 aa13.6□□□□□ -0.23
COL6A1-207ENST00000612273 HTATIP2Q9BUP3 242 aa13.6□□□□□ -0.23
COL6A1-207ENST00000612273 KNL1Q8NG31 2342 aa13.6□□□□□ -0.23
COL6A1-207ENST00000612273 TRIM64BA6NI03 449 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms