RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 FADS2O95864 444 aaKnown RBP6.18□□□□□ -1.42
SNX13-213ENST00000611725 RHOP08100 348 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 ATXN8OSP0DMR3 200 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 HSD3B1P14060 373 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 HSD3B2P26439 372 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 TMED10P49755 219 aaKnown RBP6.18□□□□□ -1.42
SNX13-213ENST00000611725 CTSCP53634 463 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 MANFP55145 182 aaKnown RBP6.18□□□□□ -1.42
SNX13-213ENST00000611725 SELPLGQ14242 412 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 SDE2Q6IQ49 451 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 SLCO6A1Q86UG4 719 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 KBTBD8Q8NFY9 601 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 XAGE5Q8WWM1 108 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 ELOVL2Q9NXB9 296 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 ZNF225Q9UK10 706 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 CLEC4EQ9ULY5 219 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 SLC9A8Q9Y2E8 581 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 GUCY1B2O75343 617 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 ARHGEF15O94989 841 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 RPL10P27635 214 aaKnown RBP6.18□□□□□ -1.42
SNX13-213ENST00000611725 NTSP30990 170 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 ALDH3B2P48448 385 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 MAPK12P53778 367 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.18□□□□□ -1.42
SNX13-213ENST00000611725 SYT16Q17RD7 645 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 SPIN4Q56A73 249 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 TMIGD1Q6UXZ0 262 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 C2orf73Q8N5S3 287 aaPredicted RBP6.18□□□□□ -1.42
SNX13-213ENST00000611725 TRAM1L1Q8N609 369 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 PHPT1Q9NRX4 125 aaPredicted RBP6.18□□□□□ -1.42
SNX13-213ENST00000611725 DAPK2Q9UIK4 370 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 ERVW-1Q9UQF0 538 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 PCDHGA8Q9Y5G5 932 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 TGFB1P01137 390 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 SRPRAP08240 638 aaKnown RBP6.18□□□□□ -1.42
SNX13-213ENST00000611725 GSTM1P09488 218 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 DBTP11182 482 aaKnown RBP6.18□□□□□ -1.42
SNX13-213ENST00000611725 KELP23276 732 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 CASP9P55211 416 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 MVKQ03426 396 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 C1DQ13901 141 aaKnown RBP6.18□□□□□ -1.42
SNX13-213ENST00000611725 HKDC1Q2TB90 917 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 SLC36A3Q495N2 470 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 SPANXN2Q5MJ10 180 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 SPRED1Q7Z699 444 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 GALNT10Q86SR1 603 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 HS3ST5Q8IZT8 346 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 MCFD2Q8NI22 146 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 DPH2Q9BQC3 489 aaPredicted RBP6.18□□□□□ -1.42
SNX13-213ENST00000611725 COPS4Q9BT78 406 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 GULP1Q9UBP9 304 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 GMEB1Q9Y692 573 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 DGKBQ9Y6T7 804 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 ZNF99A8MXY4 864 aaPredicted RBP6.18□□□□□ -1.42
SNX13-213ENST00000611725 FAM155AB1AL88 458 aaPredicted RBP6.18□□□□□ -1.42
SNX13-213ENST00000611725 NR2F1P10589 423 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 WASP42768 502 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 CSRP3P50461 194 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 CDK6Q00534 326 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 RAB39AQ14964 217 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 HEPACAMQ14CZ8 416 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 SKIV2LQ15477 1246 aaKnown RBP6.18□□□□□ -1.42
SNX13-213ENST00000611725 NPTX1Q15818 432 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 ZNF630Q2M218 657 aaPredicted RBP6.18□□□□□ -1.42
SNX13-213ENST00000611725 ZNF829Q3KNS6 432 aaPredicted RBP6.18□□□□□ -1.42
SNX13-213ENST00000611725 FAM219BQ5XKK7 198 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 EIF3MQ7L2H7 374 aaKnown RBP6.18□□□□□ -1.42
SNX13-213ENST00000611725 RD3Q7Z3Z2 195 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 AMZ2Q86W34 360 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 ZZZ3Q8IYH5 903 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 LGI4Q8N135 537 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 ISG20Q96AZ6 181 aaKnown RBP6.18□□□□□ -1.42
SNX13-213ENST00000611725 TADA1Q96BN2 335 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 NUAK2Q9H093 628 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 PCDHB14Q9Y5E9 798 aa6.18□□□□□ -1.42
SNX13-213ENST00000611725 MYH9P35579 1960 aaKnown RBP6.17□□□□□ -1.42
SNX13-213ENST00000611725 J3QRK9 145 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 HLA-EP13747 358 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 POU2F1P14859 743 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 ELK4P28324 431 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 NKX3-2P78367 333 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 TGM3Q08188 693 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 ZNF763Q0D2J5 394 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 EIF4HQ15056 248 aaKnown RBP6.17□□□□□ -1.42
SNX13-213ENST00000611725 RBM48Q5RL73 367 aaKnown RBP6.17□□□□□ -1.42
SNX13-213ENST00000611725 LIPJQ5W064 366 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 TNFAIP8L2Q6P589 184 aaPredicted RBP6.17□□□□□ -1.42
SNX13-213ENST00000611725 BHLHB9Q6PI77 547 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 RFLNAQ6ZTI6 216 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 OR7G3Q8NG95 312 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 UBTD2Q8WUN7 234 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 SMPDL3AQ92484 453 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 FBXL8Q96CD0 374 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 APIPQ96GX9 242 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 LYSMD1Q96S90 227 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 TM9SF3Q9HD45 589 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 ZCCHC3Q9NUD5 404 aaKnown RBP6.17□□□□□ -1.42
SNX13-213ENST00000611725 LOC100130705A0A1B0GUX0 176 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 GBAP04062 536 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 INPP1P49441 399 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms