RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 ZNF8P17098 575 aaPredicted RBP11.55□□□□□ -0.56
USP6NL-206ENST00000609853 KELP23276 732 aa11.55□□□□□ -0.56
USP6NL-206ENST00000609853 HPCAL1P37235 193 aa11.55□□□□□ -0.56
USP6NL-206ENST00000609853 RPL3P39023 403 aaKnown RBP11.55□□□□□ -0.56
USP6NL-206ENST00000609853 TBPL1P62380 186 aa11.55□□□□□ -0.56
USP6NL-206ENST00000609853 PHEXP78562 749 aa11.55□□□□□ -0.56
USP6NL-206ENST00000609853 CNTN1Q12860 1018 aa11.55□□□□□ -0.56
USP6NL-206ENST00000609853 EPS8Q12929 822 aa11.55□□□□□ -0.56
USP6NL-206ENST00000609853 ARHGAP19Q14CB8 494 aa11.55□□□□□ -0.56
USP6NL-206ENST00000609853 KCTD21Q4G0X4 260 aa11.55□□□□□ -0.56
USP6NL-206ENST00000609853 PIP5KL1Q5T9C9 394 aa11.55□□□□□ -0.56
USP6NL-206ENST00000609853 PNCKQ6P2M8 343 aa11.55□□□□□ -0.56
USP6NL-206ENST00000609853 IYDQ6PHW0 289 aa11.55□□□□□ -0.56
USP6NL-206ENST00000609853 PDZD3Q86UT5 571 aa11.55□□□□□ -0.56
USP6NL-206ENST00000609853 AMZ2Q86W34 360 aa11.55□□□□□ -0.56
USP6NL-206ENST00000609853 SVOPLQ8N434 492 aa11.55□□□□□ -0.56
USP6NL-206ENST00000609853 DHRSXQ8N5I4 330 aa11.55□□□□□ -0.56
USP6NL-206ENST00000609853 HUS1BQ8NHY5 278 aa11.55□□□□□ -0.56
USP6NL-206ENST00000609853 NEIL2Q969S2 332 aa11.55□□□□□ -0.56
USP6NL-206ENST00000609853 SDCCAG3Q96C92 435 aa11.55□□□□□ -0.56
USP6NL-206ENST00000609853 DGCR14Q96DF8 476 aaKnown RBP11.55□□□□□ -0.56
USP6NL-206ENST00000609853 VPS50Q96JG6 964 aa11.55□□□□□ -0.56
USP6NL-206ENST00000609853 PHF12Q96QT6 1004 aa11.55□□□□□ -0.56
USP6NL-206ENST00000609853 YTHDF1Q9BYJ9 559 aaKnown RBP11.55□□□□□ -0.56
USP6NL-206ENST00000609853 REXO4Q9GZR2 422 aaKnown RBP11.55□□□□□ -0.56
USP6NL-206ENST00000609853 IKZF5Q9H5V7 419 aa11.55□□□□□ -0.56
USP6NL-206ENST00000609853 CLK4Q9HAZ1 481 aaKnown RBP11.55□□□□□ -0.56
USP6NL-206ENST00000609853 CCDC177Q9NQR7 707 aaPredicted RBP11.55□□□□□ -0.56
USP6NL-206ENST00000609853 TUBA8Q9NY65 449 aaPredicted RBP11.55□□□□□ -0.56
USP6NL-206ENST00000609853 BTNL2Q9UIR0 455 aa11.55□□□□□ -0.56
USP6NL-206ENST00000609853 DOCK8Q8NF50 2099 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 KRT87PA6NCN2 255 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 MAGEB17A8MXT2 336 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 PDLIM1O00151 329 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 EI24O14681 340 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 FPGTO14772 594 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 SCAMP2O15127 329 aaKnown RBP11.54□□□□□ -0.56
USP6NL-206ENST00000609853 SCN2BO60939 215 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 EPN2O95208 641 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 CCNDBP1O95273 360 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 TFAP2AP05549 437 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 FESP07332 822 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 ANXA4P09525 319 aaPredicted RBP11.54□□□□□ -0.56
USP6NL-206ENST00000609853 ZNF23P17027 643 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 GPX2P18283 190 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 CAPGP40121 348 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 PIK3CBP42338 1070 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 ALDH3A2P51648 485 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 TAP2Q03519 686 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 DDX39BQ13838 428 aaKnown RBP11.54□□□□□ -0.56
USP6NL-206ENST00000609853 GK3PQ14409 553 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 UGT8Q16880 541 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 PLA2G4EQ3MJ16 856 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 SLC44A4Q53GD3 710 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 C9orf50Q5SZB4 431 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 CPTPQ5TA50 214 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 OR4F3Q6IEY1 312 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 BORAQ6PGQ7 559 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 DNAJC14Q6Y2X3 702 aaPredicted RBP11.54□□□□□ -0.56
USP6NL-206ENST00000609853 LPCAT2Q7L5N7 544 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 C11orf96Q7Z7L8 435 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 TRIM74Q86UV6 250 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 DCUN1D3Q8IWE4 304 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 ADHFE1Q8IWW8 467 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 LRRC56Q8IYG6 542 aaPredicted RBP11.54□□□□□ -0.56
USP6NL-206ENST00000609853 OXR1Q8N573 874 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 TSPAN14Q8NG11 270 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 SLC5A11Q8WWX8 675 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 ELSPBP1Q96BH3 223 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 SLC47A1Q96FL8 570 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 EGLN2Q96KS0 407 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 PANX1Q96RD7 426 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 INPP5KQ9BT40 448 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 ZDHHC5Q9C0B5 715 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 RSPH9Q9H1X1 276 aaPredicted RBP11.54□□□□□ -0.56
USP6NL-206ENST00000609853 OR52A5Q9H2C5 316 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 THEGQ9P2T0 379 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 SAMD4AQ9UPU9 718 aaKnown RBP11.54□□□□□ -0.56
USP6NL-206ENST00000609853 YBX2Q9Y2T7 364 aaKnown RBP11.54□□□□□ -0.56
USP6NL-206ENST00000609853 AK5Q9Y6K8 562 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 CKAP5Q14008 2032 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 TRPM6Q9BX84 2022 aa11.54□□□□□ -0.56
USP6NL-206ENST00000609853 AHCYL1O43865 530 aa11.53□□□□□ -0.56
USP6NL-206ENST00000609853 LRATO95237 230 aa11.53□□□□□ -0.56
USP6NL-206ENST00000609853 PCNAP12004 261 aa11.53□□□□□ -0.56
USP6NL-206ENST00000609853 C5AR1P21730 350 aa11.53□□□□□ -0.56
USP6NL-206ENST00000609853 TIA1P31483 386 aaKnown RBP eCLIP11.53□□□□□ -0.56
USP6NL-206ENST00000609853 SOX11P35716 441 aa11.53□□□□□ -0.56
USP6NL-206ENST00000609853 MTHFRP42898 656 aa11.53□□□□□ -0.56
USP6NL-206ENST00000609853 BIRC2Q13490 618 aa11.53□□□□□ -0.56
USP6NL-206ENST00000609853 CAMK2GQ13555 558 aaPredicted RBP11.53□□□□□ -0.56
USP6NL-206ENST00000609853 NUMA1Q14980 2115 aa11.53□□□□□ -0.56
USP6NL-206ENST00000609853 PON2Q15165 354 aa11.53□□□□□ -0.56
USP6NL-206ENST00000609853 ITPRIPL2Q3MIP1 535 aa11.53□□□□□ -0.56
USP6NL-206ENST00000609853 NXPE4Q6UWF7 544 aa11.53□□□□□ -0.56
USP6NL-206ENST00000609853 LCTLQ6UWM7 567 aa11.53□□□□□ -0.56
USP6NL-206ENST00000609853 XKR5Q6UX68 686 aa11.53□□□□□ -0.56
USP6NL-206ENST00000609853 R3HCC1LQ7Z5L2 792 aaKnown RBP11.53□□□□□ -0.56
USP6NL-206ENST00000609853 TMPRSS11BQ86T26 416 aa11.53□□□□□ -0.56
USP6NL-206ENST00000609853 PATL1Q86TB9 770 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms