RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 NUP210LQ5VU65 1888 aa17.27■□□□□ 0.35
CCDC12-208ENST00000603885 TXNDC9O14530 226 aa17.26■□□□□ 0.35
CCDC12-208ENST00000603885 SOCS6O14544 535 aa17.26■□□□□ 0.35
CCDC12-208ENST00000603885 SLC16A5O15375 505 aa17.26■□□□□ 0.35
CCDC12-208ENST00000603885 PRPF4O43172 522 aaKnown RBP eCLIP17.26■□□□□ 0.35
CCDC12-208ENST00000603885 IPO13O94829 963 aaKnown RBP17.26■□□□□ 0.35
CCDC12-208ENST00000603885 SEC31AO94979 1220 aaKnown RBP17.26■□□□□ 0.35
CCDC12-208ENST00000603885 SOX8P57073 446 aa17.26■□□□□ 0.35
CCDC12-208ENST00000603885 TBPL1P62380 186 aa17.26■□□□□ 0.35
CCDC12-208ENST00000603885 AIMP2Q13155 320 aaKnown RBP17.26■□□□□ 0.35
CCDC12-208ENST00000603885 PDAP1Q13442 181 aaKnown RBP17.26■□□□□ 0.35
CCDC12-208ENST00000603885 RBBP7Q16576 425 aa17.26■□□□□ 0.35
CCDC12-208ENST00000603885 HKDC1Q2TB90 917 aa17.26■□□□□ 0.35
CCDC12-208ENST00000603885 GARNL3Q5VVW2 1013 aa17.26■□□□□ 0.35
CCDC12-208ENST00000603885 STEAP4Q687X5 459 aa17.26■□□□□ 0.35
CCDC12-208ENST00000603885 RBMXL3Q8N7X1 1067 aaKnown RBP17.26■□□□□ 0.35
CCDC12-208ENST00000603885 STT3BQ8TCJ2 826 aa17.26■□□□□ 0.35
CCDC12-208ENST00000603885 PNPLA2Q96AD5 504 aa17.26■□□□□ 0.35
CCDC12-208ENST00000603885 MIEF2Q96C03 454 aa17.26■□□□□ 0.35
CCDC12-208ENST00000603885 LINGO1Q96FE5 620 aa17.26■□□□□ 0.35
CCDC12-208ENST00000603885 CRB3Q9BUF7 120 aa17.26■□□□□ 0.35
CCDC12-208ENST00000603885 MFRPQ9BY79 579 aa17.26■□□□□ 0.35
CCDC12-208ENST00000603885 TRIM31Q9BZY9 425 aa17.26■□□□□ 0.35
CCDC12-208ENST00000603885 PCBD2Q9H0N5 130 aa17.26■□□□□ 0.35
CCDC12-208ENST00000603885 PARVBQ9HBI1 364 aa17.26■□□□□ 0.35
CCDC12-208ENST00000603885 PLAC1Q9HBJ0 212 aa17.26■□□□□ 0.35
CCDC12-208ENST00000603885 SLAMF7Q9NQ25 335 aa17.26■□□□□ 0.35
CCDC12-208ENST00000603885 CUEDC1Q9NWM3 386 aaPredicted RBP17.26■□□□□ 0.35
CCDC12-208ENST00000603885 SLC17A6Q9P2U8 582 aa17.26■□□□□ 0.35
CCDC12-208ENST00000603885 ADAMTS6Q9UKP5 1117 aa17.26■□□□□ 0.35
CCDC12-208ENST00000603885 CORO1CQ9ULV4 474 aaPredicted RBP17.26■□□□□ 0.35
CCDC12-208ENST00000603885 PDE10AQ9Y233 779 aa17.26■□□□□ 0.35
CCDC12-208ENST00000603885 HS3ST3B1Q9Y662 390 aa17.26■□□□□ 0.35
CCDC12-208ENST00000603885 TEX264Q9Y6I9 313 aa17.26■□□□□ 0.35
CCDC12-208ENST00000603885 RELNP78509 3460 aa17.26■□□□□ 0.35
CCDC12-208ENST00000603885 LRRK2Q5S007 2527 aa17.26■□□□□ 0.35
CCDC12-208ENST00000603885 COL12A1Q99715 3063 aa17.26■□□□□ 0.35
CCDC12-208ENST00000603885 MDC1Q14676 2089 aaKnown RBP17.25■□□□□ 0.35
CCDC12-208ENST00000603885 PTPN13Q12923 2485 aa17.25■□□□□ 0.35
CCDC12-208ENST00000603885 PABPN1LA6NDY0 278 aaKnown RBP17.25■□□□□ 0.35
CCDC12-208ENST00000603885 H7BY64 318 aa17.25■□□□□ 0.35
CCDC12-208ENST00000603885 MASP2O00187 686 aa17.25■□□□□ 0.35
CCDC12-208ENST00000603885 HAT1O14929 419 aa17.25■□□□□ 0.35
CCDC12-208ENST00000603885 ZGLP1P0C6A0 271 aa17.25■□□□□ 0.35
CCDC12-208ENST00000603885 HRH2P25021 359 aa17.25■□□□□ 0.35
CCDC12-208ENST00000603885 ITGA3P26006 1051 aa17.25■□□□□ 0.35
CCDC12-208ENST00000603885 DSG2Q14126 1118 aa17.25■□□□□ 0.35
CCDC12-208ENST00000603885 TUBB8Q3ZCM7 444 aa17.25■□□□□ 0.35
CCDC12-208ENST00000603885 PRAMEF13Q5VWM6 474 aa17.25■□□□□ 0.35
CCDC12-208ENST00000603885 SLC6A19Q695T7 634 aa17.25■□□□□ 0.35
CCDC12-208ENST00000603885 TRMT10BQ6PF06 316 aaKnown RBP17.25■□□□□ 0.35
CCDC12-208ENST00000603885 KIRREL2Q6UWL6 708 aa17.25■□□□□ 0.35
CCDC12-208ENST00000603885 GPATCH11Q8N954 259 aa17.25■□□□□ 0.35
CCDC12-208ENST00000603885 TM9SF4Q92544 642 aa17.25■□□□□ 0.35
CCDC12-208ENST00000603885 PRAP1Q96NZ9 151 aa17.25■□□□□ 0.35
CCDC12-208ENST00000603885 WDR83Q9BRX9 315 aaKnown RBP17.25■□□□□ 0.35
CCDC12-208ENST00000603885 ZNF552Q9H707 407 aaPredicted RBP17.25■□□□□ 0.35
CCDC12-208ENST00000603885 SYNPO2LQ9H987 977 aa17.25■□□□□ 0.35
CCDC12-208ENST00000603885 TMEM184CQ9NVA4 438 aa17.25■□□□□ 0.35
CCDC12-208ENST00000603885 IGLV3-12A0A075B6K2 115 aa17.24■□□□□ 0.35
CCDC12-208ENST00000603885 EFCAB8A8MWE9 144 aa17.24■□□□□ 0.35
CCDC12-208ENST00000603885 NDC80O14777 642 aa17.24■□□□□ 0.35
CCDC12-208ENST00000603885 VPS4BO75351 444 aa17.24■□□□□ 0.35
CCDC12-208ENST00000603885 HIST1H2AGP0C0S8 130 aaPredicted RBP17.24■□□□□ 0.35
CCDC12-208ENST00000603885 HIST1H2ADP20671 130 aa17.24■□□□□ 0.35
CCDC12-208ENST00000603885 CCND1P24385 295 aa17.24■□□□□ 0.35
CCDC12-208ENST00000603885 IL2P60568 153 aa17.24■□□□□ 0.35
CCDC12-208ENST00000603885 KLC1Q07866 573 aa17.24■□□□□ 0.35
CCDC12-208ENST00000603885 FRG1Q14331 258 aaKnown RBP17.24■□□□□ 0.35
CCDC12-208ENST00000603885 HECTD2Q5U5R9 776 aa17.24■□□□□ 0.35
CCDC12-208ENST00000603885 IRAK1BP1Q5VVH5 260 aa17.24■□□□□ 0.35
CCDC12-208ENST00000603885 FAM45BPQ6NSW5 357 aa17.24■□□□□ 0.35
CCDC12-208ENST00000603885 AGTRAPQ6RW13 159 aa17.24■□□□□ 0.35
CCDC12-208ENST00000603885 MBOAT1Q6ZNC8 495 aa17.24■□□□□ 0.35
CCDC12-208ENST00000603885 PLD3Q8IV08 490 aa17.24■□□□□ 0.35
CCDC12-208ENST00000603885 PRSS58Q8IYP2 241 aa17.24■□□□□ 0.35
CCDC12-208ENST00000603885 FAM45AQ8TCE6 357 aa17.24■□□□□ 0.35
CCDC12-208ENST00000603885 HIST1H2AHQ96KK5 128 aa17.24■□□□□ 0.35
CCDC12-208ENST00000603885 KRT12Q99456 494 aa17.24■□□□□ 0.35
CCDC12-208ENST00000603885 HIST1H2AJQ99878 128 aa17.24■□□□□ 0.35
CCDC12-208ENST00000603885 H2AFJQ9BTM1 129 aa17.24■□□□□ 0.35
CCDC12-208ENST00000603885 DRC3Q9H069 523 aa17.24■□□□□ 0.35
CCDC12-208ENST00000603885 LUZP4Q9P127 313 aa17.24■□□□□ 0.35
CCDC12-208ENST00000603885 TRPC4Q9UBN4 977 aa17.24■□□□□ 0.35
CCDC12-208ENST00000603885 C3orf18Q9UK00 162 aa17.24■□□□□ 0.35
CCDC12-208ENST00000603885 VPS4AQ9UN37 437 aa17.24■□□□□ 0.35
CCDC12-208ENST00000603885 MAP4K5Q9Y4K4 846 aa17.24■□□□□ 0.35
CCDC12-208ENST00000603885 ALOX12BO75342 701 aa17.23■□□□□ 0.35
CCDC12-208ENST00000603885 ANXA5P08758 320 aa17.23■□□□□ 0.35
CCDC12-208ENST00000603885 FDXRP22570 491 aa17.23■□□□□ 0.35
CCDC12-208ENST00000603885 VARSP26640 1264 aaKnown RBP17.23■□□□□ 0.35
CCDC12-208ENST00000603885 RPS15AP62244 130 aaKnown RBP17.23■□□□□ 0.35
CCDC12-208ENST00000603885 PDIA2Q13087 525 aaKnown RBP17.23■□□□□ 0.35
CCDC12-208ENST00000603885 NDUFA9Q16795 377 aa17.23■□□□□ 0.35
CCDC12-208ENST00000603885 PHKG1Q16816 387 aa17.23■□□□□ 0.35
CCDC12-208ENST00000603885 VWA2Q5GFL6 755 aa17.23■□□□□ 0.35
CCDC12-208ENST00000603885 IGFL3Q6UXB1 125 aa17.23■□□□□ 0.35
CCDC12-208ENST00000603885 C17orf64Q86WR6 236 aa17.23■□□□□ 0.35
CCDC12-208ENST00000603885 ANKMY2Q8IV38 441 aa17.23■□□□□ 0.35
CCDC12-208ENST00000603885 Q8NA96 180 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms