RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 AGPAT4Q9NRZ5 378 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 SLC22A11Q9NSA0 550 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 ADAMTS5Q9UNA0 930 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 DUOX1Q9NRD9 1551 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 OTOFQ9HC10 1997 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 A0A1W2PN81 502 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 NPIPB8E9PQR5 432 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 M0QZK8 103 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 MYL12BO14950 172 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 KRT33AO76009 404 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 HTR1AP08908 422 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 MYL12AP19105 171 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 C5AR1P21730 350 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 THBS2P35442 1172 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 CHRNA7P36544 502 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 ZNF143P52747 638 aaPredicted RBP8.63□□□□□ -1.03
COMMD3-215ENST00000602574 EPHA4P54764 986 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 QPRTQ15274 297 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 DPY19L1Q2PZI1 675 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 CHRFAM7AQ494W8 412 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 TRIM60Q495X7 471 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 GXYLT1Q4G148 440 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 USP39Q53GS9 565 aaKnown RBP8.63□□□□□ -1.03
COMMD3-215ENST00000602574 BLOC1S3Q6QNY0 202 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 MEX3BQ6ZN04 569 aaKnown RBP8.63□□□□□ -1.03
COMMD3-215ENST00000602574 LRRC8DQ7L1W4 858 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 THAP5Q7Z6K1 395 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 ISCA2Q86U28 154 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 PAQR7Q86WK9 346 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 TGIF2LXQ8IUE1 241 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 CCDC71Q8IV32 467 aaPredicted RBP8.63□□□□□ -1.03
COMMD3-215ENST00000602574 MCEMP1Q8IX19 187 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 DNAJC22Q8N4W6 341 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 SLC44A5Q8NCS7 719 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 CPEB3Q8NE35 698 aaKnown RBP8.63□□□□□ -1.03
COMMD3-215ENST00000602574 SPATA22Q8NHS9 363 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 ETNPPLQ8TBG4 499 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 ZNF431Q8TF32 576 aaPredicted RBP8.63□□□□□ -1.03
COMMD3-215ENST00000602574 CHURC1Q8WUH1 139 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 SLC20A1Q8WUM9 679 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 ASB15Q8WXK1 588 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 KCTD13Q8WZ19 329 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 BSCL2Q96G97 398 aaPredicted RBP8.63□□□□□ -1.03
COMMD3-215ENST00000602574 SERAC1Q96JX3 654 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 ADAD1Q96M93 576 aaKnown RBP8.63□□□□□ -1.03
COMMD3-215ENST00000602574 FCRL4Q96PJ5 515 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 TEFMQ96QE5 360 aaKnown RBP8.63□□□□□ -1.03
COMMD3-215ENST00000602574 PAFAH2Q99487 392 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 NUDT16L1Q9BRJ7 211 aaKnown RBP8.63□□□□□ -1.03
COMMD3-215ENST00000602574 CRB3Q9BUF7 120 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 SF3B5Q9BWJ5 86 aaKnown RBP8.63□□□□□ -1.03
COMMD3-215ENST00000602574 UGT2B28Q9BY64 529 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 TRIM54Q9BYV2 358 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 SEMA4CQ9C0C4 833 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 UPF3AQ9H1J1 476 aaKnown RBP8.63□□□□□ -1.03
COMMD3-215ENST00000602574 SEMA6BQ9H3T3 888 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 WDR41Q9HAD4 459 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 TMEM8AQ9HCN3 771 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 SEPSECSQ9HD40 501 aaKnown RBP8.63□□□□□ -1.03
COMMD3-215ENST00000602574 NT5MQ9NPB1 228 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 PRDM7Q9NQW5 492 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 CTPS2Q9NRF8 586 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 SERINC1Q9NRX5 453 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 KCMF1Q9P0J7 381 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 GHRLQ9UBU3 117 aa8.63□□□□□ -1.03
COMMD3-215ENST00000602574 IRS2Q9Y4H2 1338 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 A0A0B4J293 547 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 A0A1W2PRB8 838 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 F8VP50 259 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 H2AFYO75367 372 aaKnown RBP8.62□□□□□ -1.03
COMMD3-215ENST00000602574 LIPAP38571 399 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 IDH3AP50213 366 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 SLC7A9P82251 487 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 TDGQ13569 410 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 GPR19Q15760 415 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 CHI3L2Q15782 390 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 CCDC157Q569K6 752 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 ARHGAP40Q5TG30 622 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 ESRP1Q6NXG1 681 aaKnown RBP8.62□□□□□ -1.03
COMMD3-215ENST00000602574 BRINP3Q76B58 766 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 SZRD1Q7Z422 152 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 DCXRQ7Z4W1 244 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 PTAR1Q7Z6K3 402 aaPredicted RBP8.62□□□□□ -1.03
COMMD3-215ENST00000602574 PHF13Q86YI8 300 aaPredicted RBP8.62□□□□□ -1.03
COMMD3-215ENST00000602574 FAM26EQ8N5C1 309 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 EFCAB3Q8N7B9 438 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 PLA2G15Q8NCC3 412 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 ZNF248Q8NDW4 579 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 OR8D4Q8NGM9 314 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 RORBQ92753 470 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 KAT5Q92993 513 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 OTULINQ96BN8 352 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 RNF31Q96EP0 1072 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 ZNF599Q96NL3 588 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 GAD1Q99259 594 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 LGMNQ99538 433 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 DERL2Q9GZP9 239 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 DCSTAMPQ9H295 470 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 TMPRSS5Q9H3S3 457 aa8.62□□□□□ -1.03
COMMD3-215ENST00000602574 RNF122Q9H9V4 155 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms