RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 TNFSF10P50591 281 aa17.09■□□□□ 0.33
CHMP2A-208ENST00000601220 PNLIPRP1P54315 467 aa17.09■□□□□ 0.33
CHMP2A-208ENST00000601220 ZRSR2Q15696 482 aaKnown RBP17.09■□□□□ 0.33
CHMP2A-208ENST00000601220 GARNL3Q5VVW2 1013 aa17.09■□□□□ 0.33
CHMP2A-208ENST00000601220 ANKRD22Q5VYY1 191 aa17.09■□□□□ 0.33
CHMP2A-208ENST00000601220 ARMC3Q5W041 872 aa17.09■□□□□ 0.33
CHMP2A-208ENST00000601220 NEPROQ6NW34 567 aa17.09■□□□□ 0.33
CHMP2A-208ENST00000601220 TMEM205Q6UW68 189 aa17.09■□□□□ 0.33
CHMP2A-208ENST00000601220 ZNF662Q6ZS27 426 aa17.09■□□□□ 0.33
CHMP2A-208ENST00000601220 NEK10Q6ZWH5 1172 aa17.09■□□□□ 0.33
CHMP2A-208ENST00000601220 GSTA5Q7RTV2 222 aa17.09■□□□□ 0.33
CHMP2A-208ENST00000601220 SHISA5Q8N114 240 aa17.09■□□□□ 0.33
CHMP2A-208ENST00000601220 PRELID2Q8N945 189 aa17.09■□□□□ 0.33
CHMP2A-208ENST00000601220 PPFIBP2Q8ND30 876 aa17.09■□□□□ 0.33
CHMP2A-208ENST00000601220 ASB11Q8WXH4 323 aa17.09■□□□□ 0.33
CHMP2A-208ENST00000601220 PTGFRNQ9P2B2 879 aa17.09■□□□□ 0.33
CHMP2A-208ENST00000601220 KLHL42Q9P2K6 505 aa17.09■□□□□ 0.33
CHMP2A-208ENST00000601220 TAC3Q9UHF0 121 aa17.09■□□□□ 0.33
CHMP2A-208ENST00000601220 CACNA1DQ01668 2161 aa17.09■□□□□ 0.33
CHMP2A-208ENST00000601220 CNTRLQ7Z7A1 2325 aa17.08■□□□□ 0.33
CHMP2A-208ENST00000601220 CROCCQ5TZA2 2017 aa17.08■□□□□ 0.33
CHMP2A-208ENST00000601220 GFYI3L273 518 aa17.08■□□□□ 0.32
CHMP2A-208ENST00000601220 PCDH17O14917 1159 aa17.08■□□□□ 0.32
CHMP2A-208ENST00000601220 P2RX6O15547 441 aa17.08■□□□□ 0.32
CHMP2A-208ENST00000601220 VPS26AO75436 327 aa17.08■□□□□ 0.32
CHMP2A-208ENST00000601220 BMP10O95393 424 aa17.08■□□□□ 0.32
CHMP2A-208ENST00000601220 FDXRP22570 491 aa17.08■□□□□ 0.32
CHMP2A-208ENST00000601220 HSD17B2P37059 387 aa17.08■□□□□ 0.32
CHMP2A-208ENST00000601220 EEF1A2Q05639 463 aaKnown RBP17.08■□□□□ 0.32
CHMP2A-208ENST00000601220 PCOLCEQ15113 449 aa17.08■□□□□ 0.32
CHMP2A-208ENST00000601220 TRIP13Q15645 432 aaPredicted RBP17.08■□□□□ 0.32
CHMP2A-208ENST00000601220 SYT16Q17RD7 645 aa17.08■□□□□ 0.32
CHMP2A-208ENST00000601220 ZNF549Q6P9A3 640 aa17.08■□□□□ 0.32
CHMP2A-208ENST00000601220 FAM180AQ6UWF9 173 aa17.08■□□□□ 0.32
CHMP2A-208ENST00000601220 ZC3H7AQ8IWR0 971 aaKnown RBP17.08■□□□□ 0.32
CHMP2A-208ENST00000601220 BCORP1Q8N888 145 aa17.08■□□□□ 0.32
CHMP2A-208ENST00000601220 MAIP1Q8WWC4 291 aa17.08■□□□□ 0.32
CHMP2A-208ENST00000601220 IMMP1LQ96LU5 166 aa17.08■□□□□ 0.32
CHMP2A-208ENST00000601220 ZNF700Q9H0M5 742 aa17.08■□□□□ 0.32
CHMP2A-208ENST00000601220 MKKSQ9NPJ1 570 aaPredicted RBP17.08■□□□□ 0.32
CHMP2A-208ENST00000601220 FAM114A2Q9NRY5 505 aa17.08■□□□□ 0.32
CHMP2A-208ENST00000601220 OLAHQ9NV23 265 aa17.08■□□□□ 0.32
CHMP2A-208ENST00000601220 C14orf105Q9NVL8 296 aa17.08■□□□□ 0.32
CHMP2A-208ENST00000601220 INTS10Q9NVR2 710 aaKnown RBP17.08■□□□□ 0.32
CHMP2A-208ENST00000601220 CREBBPQ92793 2442 aa17.07■□□□□ 0.32
CHMP2A-208ENST00000601220 A0A0A6YYC8 382 aaPredicted RBP17.07■□□□□ 0.32
CHMP2A-208ENST00000601220 ZCWPW2A0A1B0GU75 182 aa17.07■□□□□ 0.32
CHMP2A-208ENST00000601220 FAM237BA0A1B0GVD1 139 aa17.07■□□□□ 0.32
CHMP2A-208ENST00000601220 I3L1I5 382 aaPredicted RBP17.07■□□□□ 0.32
CHMP2A-208ENST00000601220 PFDN6O15212 129 aa17.07■□□□□ 0.32
CHMP2A-208ENST00000601220 ZG16O60844 167 aa17.07■□□□□ 0.32
CHMP2A-208ENST00000601220 CATP04040 527 aaKnown RBP17.07■□□□□ 0.32
CHMP2A-208ENST00000601220 EZRP15311 586 aaKnown RBP17.07■□□□□ 0.32
CHMP2A-208ENST00000601220 ARG2P78540 354 aa17.07■□□□□ 0.32
CHMP2A-208ENST00000601220 FAM53BQ14153 422 aa17.07■□□□□ 0.32
CHMP2A-208ENST00000601220 FAAH2Q6GMR7 532 aa17.07■□□□□ 0.32
CHMP2A-208ENST00000601220 RIPOR1Q6ZS17 1223 aa17.07■□□□□ 0.32
CHMP2A-208ENST00000601220 DENND6AQ8IWF6 608 aa17.07■□□□□ 0.32
CHMP2A-208ENST00000601220 SIRT6Q8N6T7 355 aa17.07■□□□□ 0.32
CHMP2A-208ENST00000601220 RELTQ969Z4 430 aa17.07■□□□□ 0.32
CHMP2A-208ENST00000601220 MMABQ96EY8 250 aaPredicted RBP17.07■□□□□ 0.32
CHMP2A-208ENST00000601220 TRAV17A0A0B4J275 112 aa17.06■□□□□ 0.32
CHMP2A-208ENST00000601220 HAT1O14929 419 aa17.06■□□□□ 0.32
CHMP2A-208ENST00000601220 PRPF4O43172 522 aaKnown RBP eCLIP17.06■□□□□ 0.32
CHMP2A-208ENST00000601220 JRKO75564 520 aa17.06■□□□□ 0.32
CHMP2A-208ENST00000601220 HEXBP07686 556 aa17.06■□□□□ 0.32
CHMP2A-208ENST00000601220 ITGAMP11215 1152 aa17.06■□□□□ 0.32
CHMP2A-208ENST00000601220 CXCR2P25025 360 aa17.06■□□□□ 0.32
CHMP2A-208ENST00000601220 SKIV2L2P42285 1042 aaKnown RBP17.06■□□□□ 0.32
CHMP2A-208ENST00000601220 TERF1P54274 439 aa17.06■□□□□ 0.32
CHMP2A-208ENST00000601220 ABATP80404 500 aa17.06■□□□□ 0.32
CHMP2A-208ENST00000601220 MAT1AQ00266 395 aaKnown RBP17.06■□□□□ 0.32
CHMP2A-208ENST00000601220 TTC27Q6P3X3 843 aa17.06■□□□□ 0.32
CHMP2A-208ENST00000601220 PLD3Q8IV08 490 aa17.06■□□□□ 0.32
CHMP2A-208ENST00000601220 SLC34A3Q8N130 599 aa17.06■□□□□ 0.32
CHMP2A-208ENST00000601220 AGGF1Q8N302 714 aaeCLIP17.06■□□□□ 0.32
CHMP2A-208ENST00000601220 YIPF2Q9BWQ6 316 aa17.06■□□□□ 0.32
CHMP2A-208ENST00000601220 HOMER3Q9NSC5 361 aa17.06■□□□□ 0.32
CHMP2A-208ENST00000601220 PCYOX1Q9UHG3 505 aa17.06■□□□□ 0.32
CHMP2A-208ENST00000601220 VPS9D1Q9Y2B5 631 aa17.06■□□□□ 0.32
CHMP2A-208ENST00000601220 LRBAP50851 2863 aa17.06■□□□□ 0.32
CHMP2A-208ENST00000601220 MAGEB16A2A368 324 aa17.05■□□□□ 0.32
CHMP2A-208ENST00000601220 DYTNA2CJ06 578 aa17.05■□□□□ 0.32
CHMP2A-208ENST00000601220 ZNF839A8K0R7 811 aa17.05■□□□□ 0.32
CHMP2A-208ENST00000601220 E5RI56 91 aa17.05■□□□□ 0.32
CHMP2A-208ENST00000601220 SMAPO00193 183 aa17.05■□□□□ 0.32
CHMP2A-208ENST00000601220 CEP104O60308 925 aa17.05■□□□□ 0.32
CHMP2A-208ENST00000601220 CCNDBP1O95273 360 aa17.05■□□□□ 0.32
CHMP2A-208ENST00000601220 WDPCPO95876 746 aa17.05■□□□□ 0.32
CHMP2A-208ENST00000601220 MPC1LP0DKB6 136 aa17.05■□□□□ 0.32
CHMP2A-208ENST00000601220 CXCR5P32302 372 aa17.05■□□□□ 0.32
CHMP2A-208ENST00000601220 PER3P56645 1201 aa17.05■□□□□ 0.32
CHMP2A-208ENST00000601220 KCNK10P57789 538 aa17.05■□□□□ 0.32
CHMP2A-208ENST00000601220 GPS1Q13098 491 aa17.05■□□□□ 0.32
CHMP2A-208ENST00000601220 CTBP1Q13363 440 aa17.05■□□□□ 0.32
CHMP2A-208ENST00000601220 CUL1Q13616 776 aa17.05■□□□□ 0.32
CHMP2A-208ENST00000601220 TSTA3Q13630 321 aaPredicted RBP17.05■□□□□ 0.32
CHMP2A-208ENST00000601220 DHX34Q14147 1143 aaKnown RBP17.05■□□□□ 0.32
CHMP2A-208ENST00000601220 INAQ16352 499 aa17.05■□□□□ 0.32
CHMP2A-208ENST00000601220 ZNF470Q6ECI4 717 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms