RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 NEIL2Q969S2 332 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 C12orf43Q96C57 262 aaKnown RBP11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 SAMD11Q96NU1 681 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 SORBS1Q9BX66 1292 aaKnown RBP11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 NTN4Q9HB63 628 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 IL23AQ9NPF7 189 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 RASSF1Q9NS23 344 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 TRNAU1APQ9NX07 287 aaKnown RBP11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 TBC1D14Q9P2M4 693 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 BTBD3Q9Y2F9 522 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 OTOL1A6NHN0 477 aaPredicted RBP11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 CYP17A1P05093 508 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 CBSLP0DN79 551 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 MAGP20916 626 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 PSMA3P25788 255 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 CBSP35520 551 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 PIGAP37287 484 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 PMS2P3Q13401 168 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 APOFQ13790 326 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 TRIM46Q7Z4K8 759 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 NANOGNBQ7Z5D8 188 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 TMEM179BQ7Z7N9 219 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 HORMAD1Q86X24 394 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 ZDHHC21Q8IVQ6 265 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 ATG16L2Q8NAA4 619 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 GLB1L3Q8NCI6 653 aaPredicted RBP11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 USP7Q93009 1102 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 BARD1Q99728 777 aaKnown RBP11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 CPEB1Q9BZB8 566 aaKnown RBP11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 FANCEQ9HB96 536 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 PCDHGA11Q9Y5H2 935 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 CEPT1Q9Y6K0 416 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 USP34Q70CQ2 3546 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 ARNTLO00327 626 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 AP1G1O43747 822 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 NUAK1O60285 661 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 PCCBP05166 539 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 ZNF182P17025 639 aaPredicted RBP11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 PFKLP17858 780 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 AGXTP21549 392 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 MAPK1P28482 360 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 TMED10P49755 219 aaKnown RBP11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 CLDN8P56748 225 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 KCNAB2Q13303 367 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 SLBPQ14493 270 aaKnown RBP eCLIP11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 RUNDC3AQ59EK9 446 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 TNIP2Q8NFZ5 429 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 OR8J3Q8NGG0 315 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 HUS1BQ8NHY5 278 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 SPPL3Q8TCT6 385 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 LYSMD1Q96S90 227 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 SLC29A3Q9BZD2 475 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 KAT8Q9H7Z6 458 aaKnown RBP11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 RDH14Q9HBH5 336 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 AASDHPPTQ9NRN7 309 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 DEC1Q9P2X7 70 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 KCNE2Q9Y6J6 123 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 REV3LO60673 3130 aa11.16□□□□□ -0.62
ARHGEF1-220ENST00000600274 XPNPEP2O43895 674 aa11.15□□□□□ -0.62
ARHGEF1-220ENST00000600274 AMD1P17707 334 aa11.15□□□□□ -0.62
ARHGEF1-220ENST00000600274 ALDH4A1P30038 563 aa11.15□□□□□ -0.62
ARHGEF1-220ENST00000600274 EIF2B2P49770 351 aaKnown RBP11.15□□□□□ -0.62
ARHGEF1-220ENST00000600274 CLCN2P51788 898 aa11.15□□□□□ -0.62
ARHGEF1-220ENST00000600274 KIAA0040Q15053 153 aa11.15□□□□□ -0.62
ARHGEF1-220ENST00000600274 DUS1LQ6P1R4 473 aaKnown RBP11.15□□□□□ -0.62
ARHGEF1-220ENST00000600274 PLD3Q8IV08 490 aa11.15□□□□□ -0.62
ARHGEF1-220ENST00000600274 ISG20Q96AZ6 181 aaKnown RBP11.15□□□□□ -0.62
ARHGEF1-220ENST00000600274 ZSCAN5AQ9BUG6 496 aa11.15□□□□□ -0.62
ARHGEF1-220ENST00000600274 BLOC1S6Q9UL45 172 aa11.15□□□□□ -0.62
ARHGEF1-220ENST00000600274 RTCAO00442 366 aaKnown RBP11.15□□□□□ -0.62
ARHGEF1-220ENST00000600274 ZNF197O14709 1029 aa11.15□□□□□ -0.62
ARHGEF1-220ENST00000600274 ZSCAN9O15535 394 aaPredicted RBP11.15□□□□□ -0.62
ARHGEF1-220ENST00000600274 MYF6P23409 242 aa11.15□□□□□ -0.62
ARHGEF1-220ENST00000600274 HNMTP50135 292 aa11.15□□□□□ -0.62
ARHGEF1-220ENST00000600274 NUP107P57740 925 aa11.15□□□□□ -0.62
ARHGEF1-220ENST00000600274 TBPL1P62380 186 aa11.15□□□□□ -0.62
ARHGEF1-220ENST00000600274 LRRC74AQ0VAA2 488 aa11.15□□□□□ -0.62
ARHGEF1-220ENST00000600274 DGCR6Q14129 220 aa11.15□□□□□ -0.62
ARHGEF1-220ENST00000600274 PLEKHS1Q5SXH7 462 aa11.15□□□□□ -0.62
ARHGEF1-220ENST00000600274 FAM109BQ6ICB4 259 aaPredicted RBP11.15□□□□□ -0.62
ARHGEF1-220ENST00000600274 C8orf59Q8N0T1 100 aaPredicted RBP11.15□□□□□ -0.62
ARHGEF1-220ENST00000600274 TMCO5AQ8N6Q1 288 aa11.15□□□□□ -0.62
ARHGEF1-220ENST00000600274 VN1R2Q8NFZ6 395 aa11.15□□□□□ -0.62
ARHGEF1-220ENST00000600274 RSPRY1Q96DX4 576 aa11.15□□□□□ -0.62
ARHGEF1-220ENST00000600274 OR4K3Q96R72 315 aa11.15□□□□□ -0.62
ARHGEF1-220ENST00000600274 ABCG2Q9UNQ0 655 aa11.15□□□□□ -0.62
ARHGEF1-220ENST00000600274 SH2B3Q9UQQ2 575 aa11.15□□□□□ -0.62
ARHGEF1-220ENST00000600274 COQ9O75208 318 aa11.15□□□□□ -0.63
ARHGEF1-220ENST00000600274 PRPS2P11908 318 aa11.15□□□□□ -0.63
ARHGEF1-220ENST00000600274 JUPP14923 745 aa11.15□□□□□ -0.63
ARHGEF1-220ENST00000600274 IMPA1P29218 277 aa11.15□□□□□ -0.63
ARHGEF1-220ENST00000600274 ALDH3A2P51648 485 aa11.15□□□□□ -0.63
ARHGEF1-220ENST00000600274 FPGSQ05932 587 aa11.15□□□□□ -0.63
ARHGEF1-220ENST00000600274 DMPKQ09013 629 aa11.15□□□□□ -0.63
ARHGEF1-220ENST00000600274 ZNF77Q15935 545 aa11.15□□□□□ -0.63
ARHGEF1-220ENST00000600274 FGD3Q5JSP0 725 aa11.15□□□□□ -0.63
ARHGEF1-220ENST00000600274 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.15□□□□□ -0.635e-7■■■■□ 26.7
ARHGEF1-220ENST00000600274 CPTPQ5TA50 214 aa11.15□□□□□ -0.63
ARHGEF1-220ENST00000600274 SPRED1Q7Z699 444 aa11.15□□□□□ -0.63
ARHGEF1-220ENST00000600274 CNIH3Q8TBE1 160 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms