RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 BDKRB1P46663 353 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 ST13P50502 369 aaKnown RBP5.78□□□□□ -1.48
VRK3-220ENST00000600259 SMSP52788 366 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 PRDX1Q06830 199 aaKnown RBP5.78□□□□□ -1.48
VRK3-220ENST00000600259 CDH17Q12864 832 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 TUBA3CQ13748 450 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 FAM53BQ14153 422 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 OASLQ15646 514 aaKnown RBP5.78□□□□□ -1.48
VRK3-220ENST00000600259 FASTKD1Q53R41 847 aaKnown RBP5.78□□□□□ -1.48
VRK3-220ENST00000600259 KRTCAP3Q53RY4 240 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 ZNF766Q5HY98 468 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.78□□□□□ -1.48
VRK3-220ENST00000600259 RNFT1Q5M7Z0 435 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 CTSL3PQ5NE16 218 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 ACER2Q5QJU3 275 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 ABHD17BQ5VST6 288 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 GARNL3Q5VVW2 1013 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 PLAG1Q6DJT9 500 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 TUBA3EQ6PEY2 450 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 SUSD1Q6UWL2 747 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 NEK10Q6ZWH5 1172 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 LINC00523Q86TU6 105 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 ZNF227Q86WZ6 799 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 DOLPP1Q86YN1 238 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 CNGA4Q8IV77 575 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 LRRC56Q8IYG6 542 aaPredicted RBP5.78□□□□□ -1.48
VRK3-220ENST00000600259 CCDC170Q8IYT3 715 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 TAB3Q8N5C8 712 aaPredicted RBP5.78□□□□□ -1.48
VRK3-220ENST00000600259 OR9A1PQ8NGU1 263 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 OR6P1Q8NGX9 317 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 PEX13Q92968 403 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 MMABQ96EY8 250 aaPredicted RBP5.78□□□□□ -1.48
VRK3-220ENST00000600259 SCMH1Q96GD3 660 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 POM121Q96HA1 1249 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 ALS2CR12Q96Q35 445 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 TTC1Q99614 292 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 TRIM51Q9BSJ1 452 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 TUBB6Q9BUF5 446 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 ACAT2Q9BWD1 397 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 RAB11FIP5Q9BXF6 653 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 HES7Q9BYE0 225 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 VN1R1Q9GZP7 353 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 LACRTQ9GZZ8 138 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 MCCC2Q9HCC0 563 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 CHRAC1Q9NRG0 131 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 TREX1Q9NSU2 369 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 C14orf105Q9NVL8 296 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 SH3BGRL2Q9UJC5 107 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 MKL2Q9ULH7 1088 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 TCAF1Q9Y4C2 921 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 ASB1Q9Y576 335 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 EPN1Q9Y6I3 576 aaPredicted RBP5.78□□□□□ -1.48
VRK3-220ENST00000600259 FAM169AQ9Y6X4 670 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 CACNA1CQ13936 2221 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 MACROD2A1Z1Q3 448 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 ERI2A8K979 691 aaKnown RBP5.77□□□□□ -1.49
VRK3-220ENST00000600259 ARHGEF33A8MVX0 844 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 E7ENX8 843 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 NPIPA5E9PKD4 350 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 F8W8V4 182 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 MYO1CO00159 1063 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 KPNA5O15131 536 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 CD3EAPO15446 510 aaKnown RBP5.77□□□□□ -1.49
VRK3-220ENST00000600259 ASNA1O43681 348 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 PHF2O75151 1096 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 PSIP1O75475 530 aaKnown RBP5.77□□□□□ -1.49
VRK3-220ENST00000600259 NEURL1O76050 574 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 SEC24DO94855 1032 aaPredicted RBP5.77□□□□□ -1.49
VRK3-220ENST00000600259 ETS1P14921 441 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 CMPK1P30085 196 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 STIP1P31948 543 aaKnown RBP5.77□□□□□ -1.49
VRK3-220ENST00000600259 CCNFP41002 786 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 CSNK1G2P78368 415 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 MAT1AQ00266 395 aaKnown RBP5.77□□□□□ -1.49
VRK3-220ENST00000600259 TAP2Q03519 686 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 TLE4Q04727 773 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 RBPJQ06330 500 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 ZNF33BQ06732 778 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 ARHGAP19Q14CB8 494 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 P3H1Q32P28 736 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 ACSBG2Q5FVE4 666 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 ZNF468Q5VIY5 522 aaPredicted RBP5.77□□□□□ -1.49
VRK3-220ENST00000600259 FCRLBQ6BAA4 426 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 SPINK14Q6IE38 97 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 TTC23LQ6PF05 361 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 CYHR1Q6ZMK1 362 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 LANCL3Q6ZV70 420 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 PRSS41Q7RTY9 318 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 VN1R4Q7Z5H5 301 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 CPEB2Q7Z5Q1 589 aaKnown RBP5.77□□□□□ -1.49
VRK3-220ENST00000600259 PCGF5Q86SE9 256 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 PRUNE1Q86TP1 453 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 CDH24Q86UP0 819 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 BEST3Q8N1M1 668 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 CSNK1A1LQ8N752 337 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 DNAAF3Q8N9W5 541 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 PHF10Q8WUB8 498 aaKnown RBP5.77□□□□□ -1.49
VRK3-220ENST00000600259 SMPDL3AQ92484 453 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 LRRC45Q96CN5 670 aa5.77□□□□□ -1.49
VRK3-220ENST00000600259 TM4SF19Q96DZ7 209 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms