RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 SLC30A3Q99726 388 aa9.33□□□□□ -0.92
VRK3-216ENST00000599342 DRC3Q9H069 523 aa9.33□□□□□ -0.92
VRK3-216ENST00000599342 MKKSQ9NPJ1 570 aaPredicted RBP9.33□□□□□ -0.92
VRK3-216ENST00000599342 SLC5A6Q9Y289 635 aa9.33□□□□□ -0.92
VRK3-216ENST00000599342 CSAG2Q9Y5P2 127 aa9.33□□□□□ -0.92
VRK3-216ENST00000599342 SEC16AO15027 2179 aa9.33□□□□□ -0.92
VRK3-216ENST00000599342 HECTD1Q9ULT8 2610 aa9.33□□□□□ -0.92
VRK3-216ENST00000599342 CCDC88CQ9P219 2028 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 SHANK1Q9Y566 2161 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 IGKV1-8A0A0C4DH67 115 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 DYTNA2CJ06 578 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 IDSB3KWA1 339 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 E7ENX8 843 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 PCDH17O14917 1159 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 HAT1O14929 419 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 HEXBP07686 556 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 F7P08709 466 aaPredicted RBP9.32□□□□□ -0.92
VRK3-216ENST00000599342 RNF224P0DH78 156 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 FDXRP22570 491 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 MAGEA3P43357 314 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 TSFMP43897 325 aaKnown RBP9.32□□□□□ -0.92
VRK3-216ENST00000599342 AVPR1BP47901 424 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 FNTAP49354 379 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 RGS4P49798 205 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 EMP2P54851 167 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 ARG2P78540 354 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 MPP1Q00013 466 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 TAP2Q03519 686 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 RELAQ04206 551 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 EEF1A2Q05639 463 aaKnown RBP9.32□□□□□ -0.92
VRK3-216ENST00000599342 MFAP5Q13361 173 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 PPP1R7Q15435 360 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 HSP90AA5PQ58FG0 334 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 CRB2Q5IJ48 1285 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 FAAH2Q6GMR7 532 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 ZNF425Q6IV72 752 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 LRRC8EQ6NSJ5 796 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 UGT3A1Q6NUS8 523 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 ZNF549Q6P9A3 640 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 FAM180AQ6UWF9 173 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 LINC00696Q6ZRV3 163 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 NDUFAF7Q7L592 441 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 KCNMB4Q86W47 210 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 PALM2Q8IXS6 379 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 PPIL6Q8IXY8 311 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 CPNE9Q8IYJ1 553 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 NAT8LQ8N9F0 302 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 ST6GALNAC3Q8NDV1 305 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 CD200R1Q8TD46 325 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 ASB11Q8WXH4 323 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 OR2A5Q96R48 311 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 AARSD1Q9BTE6 412 aaKnown RBP9.32□□□□□ -0.92
VRK3-216ENST00000599342 CCDC177Q9NQR7 707 aaPredicted RBP9.32□□□□□ -0.92
VRK3-216ENST00000599342 RIC8BQ9NVN3 520 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 TRMT6Q9UJA5 497 aaKnown RBP9.32□□□□□ -0.92
VRK3-216ENST00000599342 ERRFI1Q9UJM3 462 aaPredicted RBP9.32□□□□□ -0.92
VRK3-216ENST00000599342 FBXO5Q9UKT4 447 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 DHRS7Q9Y394 339 aa9.32□□□□□ -0.92
VRK3-216ENST00000599342 NBASA2RRP1 2371 aa9.31□□□□□ -0.92
VRK3-216ENST00000599342 A0A0A6YYC8 382 aaPredicted RBP9.31□□□□□ -0.92
VRK3-216ENST00000599342 PABPN1LA6NDY0 278 aaKnown RBP9.31□□□□□ -0.92
VRK3-216ENST00000599342 H7BY64 318 aa9.31□□□□□ -0.92
VRK3-216ENST00000599342 I3L1I5 382 aaPredicted RBP9.31□□□□□ -0.92
VRK3-216ENST00000599342 GFYI3L273 518 aa9.31□□□□□ -0.92
VRK3-216ENST00000599342 EIF3FO00303 357 aaPredicted RBP9.31□□□□□ -0.92
VRK3-216ENST00000599342 FFAR3O14843 346 aa9.31□□□□□ -0.92
VRK3-216ENST00000599342 GPR42O15529 346 aa9.31□□□□□ -0.92
VRK3-216ENST00000599342 HAUS5O94927 633 aa9.31□□□□□ -0.92
VRK3-216ENST00000599342 PRR35P0CG20 571 aa9.31□□□□□ -0.92
VRK3-216ENST00000599342 COX6A1P12074 109 aa9.31□□□□□ -0.92
VRK3-216ENST00000599342 PGAM1P18669 254 aa9.31□□□□□ -0.92
VRK3-216ENST00000599342 HRH2P25021 359 aa9.31□□□□□ -0.92
VRK3-216ENST00000599342 IMPA1P29218 277 aa9.31□□□□□ -0.92
VRK3-216ENST00000599342 SLC26A3P40879 764 aa9.31□□□□□ -0.92
VRK3-216ENST00000599342 SKIV2L2P42285 1042 aaKnown RBP9.31□□□□□ -0.92
VRK3-216ENST00000599342 RPS15AP62244 130 aaKnown RBP9.31□□□□□ -0.92
VRK3-216ENST00000599342 TBPL1P62380 186 aa9.31□□□□□ -0.92
VRK3-216ENST00000599342 AP2B1P63010 937 aa9.31□□□□□ -0.92
VRK3-216ENST00000599342 Q0VFX4 171 aa9.31□□□□□ -0.92
VRK3-216ENST00000599342 SP140Q13342 867 aa9.31□□□□□ -0.92
VRK3-216ENST00000599342 FAM53BQ14153 422 aa9.31□□□□□ -0.92
VRK3-216ENST00000599342 MFSD4BQ5TF39 518 aa9.31□□□□□ -0.92
VRK3-216ENST00000599342 ATG9BQ674R7 924 aa9.31□□□□□ -0.92
VRK3-216ENST00000599342 HIST2H2BCQ6DN03 193 aa9.31□□□□□ -0.92
VRK3-216ENST00000599342 PIWIL4Q7Z3Z4 852 aaKnown RBP9.31□□□□□ -0.92
VRK3-216ENST00000599342 LAPTM4BQ86VI4 370 aa9.31□□□□□ -0.92
VRK3-216ENST00000599342 PLD3Q8IV08 490 aa9.31□□□□□ -0.92
VRK3-216ENST00000599342 MYO1HQ8N1T3 1032 aa9.31□□□□□ -0.92
VRK3-216ENST00000599342 AMER3Q8N944 861 aa9.31□□□□□ -0.92
VRK3-216ENST00000599342 MCOLN3Q8TDD5 553 aa9.31□□□□□ -0.92
VRK3-216ENST00000599342 ACTRT1Q8TDG2 376 aa9.31□□□□□ -0.92
VRK3-216ENST00000599342 GRHL3Q8TE85 626 aa9.31□□□□□ -0.92
VRK3-216ENST00000599342 PRAP1Q96NZ9 151 aa9.31□□□□□ -0.92
VRK3-216ENST00000599342 LMF1Q96S06 567 aa9.31□□□□□ -0.92
VRK3-216ENST00000599342 BARD1Q99728 777 aaKnown RBP9.31□□□□□ -0.92
VRK3-216ENST00000599342 MESP1Q9BRJ9 268 aa9.31□□□□□ -0.92
VRK3-216ENST00000599342 TGIF2Q9GZN2 237 aa9.31□□□□□ -0.92
VRK3-216ENST00000599342 PCBD2Q9H0N5 130 aa9.31□□□□□ -0.92
VRK3-216ENST00000599342 IARS2Q9NSE4 1012 aaKnown RBP9.31□□□□□ -0.92
VRK3-216ENST00000599342 PTGFRNQ9P2B2 879 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms