RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 NR0B2Q15466 257 aa11.63□□□□□ -0.55
SHKBP1-213ENST00000597325 CYP2A13Q16696 494 aa11.63□□□□□ -0.55
SHKBP1-213ENST00000597325 PTCHD3Q3KNS1 767 aa11.63□□□□□ -0.55
SHKBP1-213ENST00000597325 FBXO48Q5FWF7 155 aa11.63□□□□□ -0.55
SHKBP1-213ENST00000597325 ZNF678Q5SXM1 525 aa11.63□□□□□ -0.55
SHKBP1-213ENST00000597325 THEMIS2Q5TEJ8 643 aa11.63□□□□□ -0.55
SHKBP1-213ENST00000597325 ZNF787Q6DD87 383 aa11.63□□□□□ -0.55
SHKBP1-213ENST00000597325 OGFOD3Q6PK18 319 aa11.63□□□□□ -0.55
SHKBP1-213ENST00000597325 ZCCHC23Q6ZST2 131 aa11.63□□□□□ -0.55
SHKBP1-213ENST00000597325 AMIGO1Q86WK6 493 aa11.63□□□□□ -0.55
SHKBP1-213ENST00000597325 ARL14Q8N4G2 192 aa11.63□□□□□ -0.55
SHKBP1-213ENST00000597325 GPR156Q8NFN8 814 aa11.63□□□□□ -0.55
SHKBP1-213ENST00000597325 OR2L8Q8NGY9 312 aa11.63□□□□□ -0.55
SHKBP1-213ENST00000597325 ZNF480Q8WV37 535 aa11.63□□□□□ -0.55
SHKBP1-213ENST00000597325 CKAP2Q8WWK9 683 aa11.63□□□□□ -0.55
SHKBP1-213ENST00000597325 GRAMD1AQ96CP6 724 aa11.63□□□□□ -0.55
SHKBP1-213ENST00000597325 IL17FQ96PD4 163 aa11.63□□□□□ -0.55
SHKBP1-213ENST00000597325 SLC38A3Q99624 504 aa11.63□□□□□ -0.55
SHKBP1-213ENST00000597325 CAPS2Q9BXY5 557 aa11.63□□□□□ -0.55
SHKBP1-213ENST00000597325 ATG10Q9H0Y0 220 aa11.63□□□□□ -0.55
SHKBP1-213ENST00000597325 XKR8Q9H6D3 395 aa11.63□□□□□ -0.55
SHKBP1-213ENST00000597325 ABCF3Q9NUQ8 709 aa11.63□□□□□ -0.55
SHKBP1-213ENST00000597325 DNAJC11Q9NVH1 559 aa11.63□□□□□ -0.55
SHKBP1-213ENST00000597325 ICKQ9UPZ9 632 aa11.63□□□□□ -0.55
SHKBP1-213ENST00000597325 STK38LQ9Y2H1 464 aa11.63□□□□□ -0.55
SHKBP1-213ENST00000597325 ENTPD2Q9Y5L3 495 aa11.63□□□□□ -0.55
SHKBP1-213ENST00000597325 U3KQA8 63 aa11.63□□□□□ -0.55
SHKBP1-213ENST00000597325 PRRC2CQ9Y520 2896 aaKnown RBP11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 PRAMEF33A0A0G2JMD5 474 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 K7EPI3 171 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 TAPBPO15533 448 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 NPHS1O60500 1241 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 KATNA1O75449 491 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 GIMD1P0DJR0 217 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 ERGP11308 486 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 EPB42P16452 691 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 GGT5P36269 586 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 SLC6A12P48065 614 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 CD97P48960 835 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 DAB2P98082 770 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 RCN2Q14257 317 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 GRB7Q14451 532 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 RBBP7Q16576 425 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 C18orf21Q32NC0 220 aaPredicted RBP11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 PRAMEF13Q5VWM6 474 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 TTC19Q6DKK2 380 aaPredicted RBP11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 ARMC6Q6NXE6 501 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 KLHL35Q6PF15 583 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 TMEM26Q6ZUK4 368 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 FRMD7Q6ZUT3 714 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 SFTPA2Q8IWL1 248 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 PPFIBP2Q8ND30 876 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 OR4E2Q8NGC2 313 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 OR6C4Q8NGE1 309 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 OR56A3Q8NH54 315 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 JPH3Q8WXH2 748 aaPredicted RBP11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 SMPDL3AQ92484 453 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 ESAMQ96AP7 390 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 MIB2Q96AX9 1013 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 PYCR2Q96C36 320 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 CNDP1Q96KN2 507 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 TRMOQ9BU70 441 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 GATA5Q9BWX5 397 aaPredicted RBP11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 C1QTNF3Q9BXJ4 246 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 ZMYND15Q9H091 742 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 PCBD2Q9H0N5 130 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 ADNPQ9H2P0 1102 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 UCK1Q9HA47 277 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 EML4Q9HC35 981 aaKnown RBP11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 OR6C2Q9NZP2 312 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 PCTPQ9UKL6 214 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 DYRK1BQ9Y463 629 aa11.62□□□□□ -0.55
SHKBP1-213ENST00000597325 LRRC14BA6NHZ5 514 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 LILRA5A6NI73 299 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 E7ENX8 843 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 E2F3O00716 465 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 KLF11O14901 512 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 ZW10O43264 779 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 NUDT21O43809 227 aaKnown RBP11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 SNUPNO95149 360 aaKnown RBP11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 MLYCDO95822 493 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 GDF5P43026 501 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 SLC1A6P48664 564 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 ABCE1P61221 599 aaKnown RBP11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 GNGT1P63211 74 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 TAP2Q03519 686 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 BST1Q10588 318 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 LCP2Q13094 533 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 PRKAA1Q13131 559 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 GTF2H2Q13888 395 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 TGIF1Q15583 401 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 TUBB8Q3ZCM7 444 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 UNC50Q53HI1 259 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 GTF2H2CQ6P1K8 395 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 GOLGA7Q7Z5G4 137 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 THOC6Q86W42 341 aaKnown RBP11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 OOSP2Q86WS3 158 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 C17orf82Q86X59 251 aaPredicted RBP11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 SLC35F3Q8IY50 421 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms