RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 PRAP1Q96NZ9 151 aa10.03□□□□□ -0.8
CCDC9-203ENST00000596938 HIST1H2AJQ99878 128 aa10.03□□□□□ -0.8
CCDC9-203ENST00000596938 H2AFJQ9BTM1 129 aa10.03□□□□□ -0.8
CCDC9-203ENST00000596938 NUDT9Q9BW91 350 aa10.03□□□□□ -0.8
CCDC9-203ENST00000596938 TRIM54Q9BYV2 358 aa10.03□□□□□ -0.8
CCDC9-203ENST00000596938 CCDC177Q9NQR7 707 aaPredicted RBP10.03□□□□□ -0.8
CCDC9-203ENST00000596938 SEMA3GQ9NS98 782 aa10.03□□□□□ -0.8
CCDC9-203ENST00000596938 GPR83Q9NYM4 423 aa10.03□□□□□ -0.8
CCDC9-203ENST00000596938 WHRNQ9P202 907 aa10.03□□□□□ -0.8
CCDC9-203ENST00000596938 ZNF282Q9UDV7 671 aaPredicted RBP10.03□□□□□ -0.8
CCDC9-203ENST00000596938 RUVBL1Q9Y265 456 aaKnown RBP10.03□□□□□ -0.8
CCDC9-203ENST00000596938 MAU2Q9Y6X3 613 aa10.03□□□□□ -0.8
CCDC9-203ENST00000596938 SPTBP11277 2137 aa10.03□□□□□ -0.8
CCDC9-203ENST00000596938 SEC16AO15027 2179 aa10.02□□□□□ -0.8
CCDC9-203ENST00000596938 EIF3HO15372 352 aaKnown RBP eCLIP10.02□□□□□ -0.81
CCDC9-203ENST00000596938 PRPF4O43172 522 aaKnown RBP eCLIP10.02□□□□□ -0.81
CCDC9-203ENST00000596938 DPM1O60762 260 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 ZIC2O95409 532 aaPredicted RBP10.02□□□□□ -0.81
CCDC9-203ENST00000596938 ENO2P09104 434 aaPredicted RBP10.02□□□□□ -0.81
CCDC9-203ENST00000596938 ZGLP1P0C6A0 271 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 ATXN8OSP0DMR3 200 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 NPPBP16860 134 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 CASQ1P31415 396 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 SLC26A3P40879 764 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 AP1S2P56377 157 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 FOXL2P58012 376 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 OCA2Q04671 838 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 CALCOCO2Q13137 446 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 AIMP2Q13155 320 aaKnown RBP10.02□□□□□ -0.81
CCDC9-203ENST00000596938 NAE1Q13564 534 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 DSG2Q14126 1118 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 FAM53BQ14153 422 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 IGFBP7Q16270 282 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 PHKG1Q16816 387 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 DUPD1Q68J44 220 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 KIRREL2Q6UWL6 708 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 IGFL3Q6UXB1 125 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 SLC26A11Q86WA9 606 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 ZC3HC1Q86WB0 502 aaKnown RBP10.02□□□□□ -0.81
CCDC9-203ENST00000596938 TMEM151BQ8IW70 566 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 GALNT16Q8N428 558 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 GPATCH11Q8N954 259 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 STT3BQ8TCJ2 826 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 VPS50Q96JG6 964 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 CABS1Q96KC9 395 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 OLFM1Q99784 485 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 MCMBPQ9BTE3 642 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 SGPP1Q9BX95 441 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 FAM129AQ9BZQ8 928 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 TGIF2Q9GZN2 237 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 SYNPO2LQ9H987 977 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 CUEDC1Q9NWM3 386 aaPredicted RBP10.02□□□□□ -0.81
CCDC9-203ENST00000596938 NSMCE4AQ9NXX6 385 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 ZFATQ9P243 1243 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 SLC17A6Q9P2U8 582 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 CTSFQ9UBX1 484 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 CDC23Q9UJX2 597 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 NOVA2Q9UNW9 492 aaKnown RBP10.02□□□□□ -0.81
CCDC9-203ENST00000596938 HS3ST3B1Q9Y662 390 aa10.02□□□□□ -0.81
CCDC9-203ENST00000596938 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.02□□□□□ -0.81
CCDC9-203ENST00000596938 SPENQ96T58 3664 aaKnown RBP10.02□□□□□ -0.81
CCDC9-203ENST00000596938 MYO18BQ8IUG5 2567 aa10.01□□□□□ -0.81
CCDC9-203ENST00000596938 FLNBO75369 2602 aaKnown RBP10.01□□□□□ -0.81
CCDC9-203ENST00000596938 SOCS6O14544 535 aa10.01□□□□□ -0.81
CCDC9-203ENST00000596938 HAT1O14929 419 aa10.01□□□□□ -0.81
CCDC9-203ENST00000596938 FOXS1O43638 330 aa10.01□□□□□ -0.81
CCDC9-203ENST00000596938 IPO13O94829 963 aaKnown RBP10.01□□□□□ -0.81
CCDC9-203ENST00000596938 ALPPP05187 535 aa10.01□□□□□ -0.81
CCDC9-203ENST00000596938 FBLP22087 321 aaKnown RBP10.01□□□□□ -0.81
CCDC9-203ENST00000596938 CD97P48960 835 aa10.01□□□□□ -0.81
CCDC9-203ENST00000596938 RPS15AP62244 130 aaKnown RBP10.01□□□□□ -0.81
CCDC9-203ENST00000596938 TBPL1P62380 186 aa10.01□□□□□ -0.81
CCDC9-203ENST00000596938 CSNK1G2P78368 415 aa10.01□□□□□ -0.81
CCDC9-203ENST00000596938 KLC1Q07866 573 aa10.01□□□□□ -0.81
CCDC9-203ENST00000596938 FASTKD3Q14CZ7 662 aaKnown RBP10.01□□□□□ -0.81
CCDC9-203ENST00000596938 NDUFA9Q16795 377 aa10.01□□□□□ -0.81
CCDC9-203ENST00000596938 ZXDCQ2QGD7 858 aaPredicted RBP10.01□□□□□ -0.81
CCDC9-203ENST00000596938 HKDC1Q2TB90 917 aa10.01□□□□□ -0.81
CCDC9-203ENST00000596938 NADK2Q4G0N4 442 aa10.01□□□□□ -0.81
CCDC9-203ENST00000596938 VWA5B1Q5TIE3 1220 aa10.01□□□□□ -0.81
CCDC9-203ENST00000596938 PRAMEF13Q5VWM6 474 aa10.01□□□□□ -0.81
CCDC9-203ENST00000596938 ATG9BQ674R7 924 aa10.01□□□□□ -0.81
CCDC9-203ENST00000596938 CAPN13Q6MZZ7 669 aaPredicted RBP10.01□□□□□ -0.81
CCDC9-203ENST00000596938 JMJD6Q6NYC1 403 aaPredicted RBP10.01□□□□□ -0.81
CCDC9-203ENST00000596938 LCTLQ6UWM7 567 aa10.01□□□□□ -0.81
CCDC9-203ENST00000596938 TMEM207Q6UWW9 146 aa10.01□□□□□ -0.81
CCDC9-203ENST00000596938 ADCK2Q7Z695 626 aa10.01□□□□□ -0.81
CCDC9-203ENST00000596938 STRA8Q7Z7C7 330 aa10.01□□□□□ -0.81
CCDC9-203ENST00000596938 C17orf64Q86WR6 236 aa10.01□□□□□ -0.81
CCDC9-203ENST00000596938 ZBED8Q8IZ13 594 aa10.01□□□□□ -0.81
CCDC9-203ENST00000596938 DTWD1Q8N5C7 304 aa10.01□□□□□ -0.81
CCDC9-203ENST00000596938 NKAPQ8N5F7 415 aaKnown RBP10.01□□□□□ -0.81
CCDC9-203ENST00000596938 METTL27Q8N6F8 245 aaPredicted RBP10.01□□□□□ -0.81
CCDC9-203ENST00000596938 RBMXL3Q8N7X1 1067 aaKnown RBP10.01□□□□□ -0.81
CCDC9-203ENST00000596938 ABHD11Q8NFV4 315 aa10.01□□□□□ -0.81
CCDC9-203ENST00000596938 OR4K1Q8NGD4 311 aa10.01□□□□□ -0.81
CCDC9-203ENST00000596938 OR56A3Q8NH54 315 aa10.01□□□□□ -0.81
CCDC9-203ENST00000596938 PYROXD1Q8WU10 500 aa10.01□□□□□ -0.81
CCDC9-203ENST00000596938 ATL1Q8WXF7 558 aa10.01□□□□□ -0.81
CCDC9-203ENST00000596938 MIB2Q96AX9 1013 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms