RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 FREM2Q5SZK8 3169 aa18.9■□□□□ 0.62
LSM4-203ENST00000593829 ENO4A6NNW6 628 aa18.9■□□□□ 0.62
LSM4-203ENST00000593829 ZNF839A8K0R7 811 aa18.9■□□□□ 0.62
LSM4-203ENST00000593829 MAP3K7O43318 606 aa18.9■□□□□ 0.62
LSM4-203ENST00000593829 ERGP11308 486 aa18.9■□□□□ 0.62
LSM4-203ENST00000593829 SLC5A2P31639 672 aa18.9■□□□□ 0.62
LSM4-203ENST00000593829 SH3BP2P78314 561 aa18.9■□□□□ 0.62
LSM4-203ENST00000593829 FOXM1Q08050 763 aa18.9■□□□□ 0.62
LSM4-203ENST00000593829 RBBP5Q15291 538 aaKnown RBP18.9■□□□□ 0.62
LSM4-203ENST00000593829 SLC5A12Q1EHB4 618 aa18.9■□□□□ 0.62
LSM4-203ENST00000593829 TMTC4Q5T4D3 741 aa18.9■□□□□ 0.62
LSM4-203ENST00000593829 DCAF12Q5T6F0 453 aa18.9■□□□□ 0.62
LSM4-203ENST00000593829 D2HGDHQ8N465 521 aa18.9■□□□□ 0.62
LSM4-203ENST00000593829 DDA1Q9BW61 102 aa18.9■□□□□ 0.62
LSM4-203ENST00000593829 TMEM120AQ9BXJ8 343 aa18.9■□□□□ 0.62
LSM4-203ENST00000593829 SOHLH2Q9NX45 425 aa18.9■□□□□ 0.62
LSM4-203ENST00000593829 TAS2R1Q9NYW7 299 aa18.9■□□□□ 0.62
LSM4-203ENST00000593829 SLC17A7Q9P2U7 560 aa18.9■□□□□ 0.62
LSM4-203ENST00000593829 SCOCQ9UIL1 159 aa18.9■□□□□ 0.62
LSM4-203ENST00000593829 DCTN4Q9UJW0 460 aa18.9■□□□□ 0.62
LSM4-203ENST00000593829 PDE10AQ9Y233 779 aa18.9■□□□□ 0.62
LSM4-203ENST00000593829 BTRCQ9Y297 605 aa18.9■□□□□ 0.62
LSM4-203ENST00000593829 A0A0J9YY10 115 aa18.89■□□□□ 0.61
LSM4-203ENST00000593829 C9orf172C9J069 976 aa18.89■□□□□ 0.61
LSM4-203ENST00000593829 POLR1CO15160 346 aaPredicted RBP18.89■□□□□ 0.61
LSM4-203ENST00000593829 PRAMEF10O60809 474 aa18.89■□□□□ 0.61
LSM4-203ENST00000593829 SNUPNO95149 360 aaKnown RBP18.89■□□□□ 0.61
LSM4-203ENST00000593829 SLC16A8O95907 504 aa18.89■□□□□ 0.61
LSM4-203ENST00000593829 MT-ND3P03897 115 aa18.89■□□□□ 0.61
LSM4-203ENST00000593829 ST6GAL1P15907 406 aa18.89■□□□□ 0.61
LSM4-203ENST00000593829 RAB10P61026 200 aa18.89■□□□□ 0.61
LSM4-203ENST00000593829 KPNB1Q14974 876 aaKnown RBP18.89■□□□□ 0.61
LSM4-203ENST00000593829 AP1ARQ63HQ0 302 aa18.89■□□□□ 0.61
LSM4-203ENST00000593829 TRIM73Q86UV7 250 aa18.89■□□□□ 0.61
LSM4-203ENST00000593829 PROSER1Q86XN7 944 aa18.89■□□□□ 0.61
LSM4-203ENST00000593829 PPFIBP2Q8ND30 876 aa18.89■□□□□ 0.61
LSM4-203ENST00000593829 NRG4Q8WWG1 115 aa18.89■□□□□ 0.61
LSM4-203ENST00000593829 SLC44A1Q8WWI5 657 aa18.89■□□□□ 0.61
LSM4-203ENST00000593829 MCUR1Q96AQ8 359 aa18.89■□□□□ 0.61
LSM4-203ENST00000593829 PAPOLBQ9NRJ5 636 aaKnown RBP18.89■□□□□ 0.61
LSM4-203ENST00000593829 PCDHB11Q9Y5F2 797 aa18.89■□□□□ 0.61
LSM4-203ENST00000593829 IKBKGQ9Y6K9 419 aa18.89■□□□□ 0.61
LSM4-203ENST00000593829 A0A0G2JND7 137 aa18.88■□□□□ 0.61
LSM4-203ENST00000593829 MAGEA13PA6NCF6 341 aa18.88■□□□□ 0.61
LSM4-203ENST00000593829 PHGDHO43175 533 aaKnown RBP18.88■□□□□ 0.61
LSM4-203ENST00000593829 SMIM24O75264 130 aa18.88■□□□□ 0.61
LSM4-203ENST00000593829 WISP3O95389 354 aaPredicted RBP18.88■□□□□ 0.61
LSM4-203ENST00000593829 HIST1H2AGP0C0S8 130 aaPredicted RBP18.88■□□□□ 0.61
LSM4-203ENST00000593829 ESRRAP11474 423 aaPredicted RBP18.88■□□□□ 0.61
LSM4-203ENST00000593829 PVRP15151 417 aa18.88■□□□□ 0.61
LSM4-203ENST00000593829 HIST1H2ADP20671 130 aa18.88■□□□□ 0.61
LSM4-203ENST00000593829 PNLIPRP1P54315 467 aa18.88■□□□□ 0.61
LSM4-203ENST00000593829 CEACAM20Q6UY09 585 aa18.88■□□□□ 0.61
LSM4-203ENST00000593829 TRIM42Q8IWZ5 723 aa18.88■□□□□ 0.61
LSM4-203ENST00000593829 ANKRD49Q8WVL7 239 aa18.88■□□□□ 0.61
LSM4-203ENST00000593829 SMPDL3AQ92484 453 aa18.88■□□□□ 0.61
LSM4-203ENST00000593829 HIST1H2AHQ96KK5 128 aa18.88■□□□□ 0.61
LSM4-203ENST00000593829 CCDC138Q96M89 665 aa18.88■□□□□ 0.61
LSM4-203ENST00000593829 TEFMQ96QE5 360 aaKnown RBP18.88■□□□□ 0.61
LSM4-203ENST00000593829 OR6C1Q96RD1 312 aa18.88■□□□□ 0.61
LSM4-203ENST00000593829 HIST1H2AJQ99878 128 aa18.88■□□□□ 0.61
LSM4-203ENST00000593829 H2AFJQ9BTM1 129 aa18.88■□□□□ 0.61
LSM4-203ENST00000593829 TRIM54Q9BYV2 358 aa18.88■□□□□ 0.61
LSM4-203ENST00000593829 PDE7BQ9NP56 450 aa18.88■□□□□ 0.61
LSM4-203ENST00000593829 PABPN1LA6NDY0 278 aaKnown RBP18.88■□□□□ 0.61
LSM4-203ENST00000593829 PRICKLE3O43900 615 aaPredicted RBP18.88■□□□□ 0.61
LSM4-203ENST00000593829 KRT36O76013 467 aa18.88■□□□□ 0.61
LSM4-203ENST00000593829 INHBAP08476 426 aa18.88■□□□□ 0.61
LSM4-203ENST00000593829 EBLN1P0CF75 366 aa18.88■□□□□ 0.61
LSM4-203ENST00000593829 FOLR1P15328 257 aa18.88■□□□□ 0.61
LSM4-203ENST00000593829 SERPINB3P29508 390 aa18.88■□□□□ 0.61
LSM4-203ENST00000593829 PCBP4P57723 403 aaKnown RBP18.88■□□□□ 0.61
LSM4-203ENST00000593829 ACY1Q03154 408 aa18.88■□□□□ 0.61
LSM4-203ENST00000593829 FASTKQ14296 549 aaKnown RBP18.88■□□□□ 0.61
LSM4-203ENST00000593829 IL11RAQ14626 422 aa18.88■□□□□ 0.61
LSM4-203ENST00000593829 KCNAB1Q14722 419 aa18.88■□□□□ 0.61
LSM4-203ENST00000593829 SF1Q15637 639 aaKnown RBP18.88■□□□□ 0.61
LSM4-203ENST00000593829 PHKG1Q16816 387 aa18.88■□□□□ 0.61
LSM4-203ENST00000593829 MROH9Q5TGP6 573 aa18.88■□□□□ 0.61
LSM4-203ENST00000593829 RINLQ6ZS11 566 aa18.88■□□□□ 0.61
LSM4-203ENST00000593829 SNIP1Q8TAD8 396 aaKnown RBP18.88■□□□□ 0.61
LSM4-203ENST00000593829 ZNF480Q8WV37 535 aa18.88■□□□□ 0.61
LSM4-203ENST00000593829 STMN2Q93045 179 aa18.88■□□□□ 0.61
LSM4-203ENST00000593829 PMEPA1Q969W9 287 aa18.88■□□□□ 0.61
LSM4-203ENST00000593829 NR1H4Q96RI1 486 aaPredicted RBP18.88■□□□□ 0.61
LSM4-203ENST00000593829 CTRCQ99895 268 aa18.88■□□□□ 0.61
LSM4-203ENST00000593829 ZPBPQ9BS86 351 aa18.88■□□□□ 0.61
LSM4-203ENST00000593829 FAM192AQ9GZU8 254 aa18.88■□□□□ 0.61
LSM4-203ENST00000593829 KLHL25Q9H0H3 589 aa18.88■□□□□ 0.61
LSM4-203ENST00000593829 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.88■□□□□ 0.61
LSM4-203ENST00000593829 B3GALT1Q9Y5Z6 326 aa18.88■□□□□ 0.61
LSM4-203ENST00000593829 TLX3O43711 291 aaPredicted RBP18.87■□□□□ 0.61
LSM4-203ENST00000593829 FKBP9O95302 570 aa18.87■□□□□ 0.61
LSM4-203ENST00000593829 ENO2P09104 434 aaPredicted RBP18.87■□□□□ 0.61
LSM4-203ENST00000593829 CRABP2P29373 138 aa18.87■□□□□ 0.61
LSM4-203ENST00000593829 TUBB3Q13509 450 aa18.87■□□□□ 0.61
LSM4-203ENST00000593829 BMPR2Q13873 1038 aa18.87■□□□□ 0.61
LSM4-203ENST00000593829 RAPH1Q70E73 1250 aa18.87■□□□□ 0.61
LSM4-203ENST00000593829 SYTL1Q8IYJ3 562 aa18.87■□□□□ 0.61
LSM4-203ENST00000593829 DERL2Q9GZP9 239 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms