RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 SBSNQ6UWP8 590 aa17.64■□□□□ 0.41
SHKBP1-202ENST00000593764 PLD3Q8IV08 490 aa17.64■□□□□ 0.41
SHKBP1-202ENST00000593764 ANKRD49Q8WVL7 239 aa17.64■□□□□ 0.41
SHKBP1-202ENST00000593764 FKBP10Q96AY3 582 aa17.64■□□□□ 0.41
SHKBP1-202ENST00000593764 PTERQ96BW5 349 aa17.64■□□□□ 0.41
SHKBP1-202ENST00000593764 VPS39Q96JC1 886 aa17.64■□□□□ 0.41
SHKBP1-202ENST00000593764 PCBD2Q9H0N5 130 aa17.64■□□□□ 0.41
SHKBP1-202ENST00000593764 SLC26A1Q9H2B4 701 aa17.64■□□□□ 0.41
SHKBP1-202ENST00000593764 TMEM184CQ9NVA4 438 aa17.64■□□□□ 0.41
SHKBP1-202ENST00000593764 UTP6Q9NYH9 597 aaKnown RBP17.64■□□□□ 0.41
SHKBP1-202ENST00000593764 MTO1Q9Y2Z2 717 aaKnown RBP17.64■□□□□ 0.41
SHKBP1-202ENST00000593764 ESYT3A0FGR9 886 aa17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 WISP3O95389 354 aaPredicted RBP17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 PDGFAP04085 211 aa17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 GSTA2P09210 222 aa17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 HIST1H2AGP0C0S8 130 aaPredicted RBP17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 PIM1P11309 404 aaPredicted RBP17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 NPPBP16860 134 aa17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 HIST1H2ADP20671 130 aa17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 HRH2P25021 359 aa17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 OTX2P32243 289 aa17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 FOLR3P41439 243 aa17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 MAGEA4P43358 317 aa17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 CCL11P51671 97 aa17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 AP1S2P56377 157 aa17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 NKG7Q16617 165 aa17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 PPP1R3AQ16821 1122 aa17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 WHAMMP3Q1A5X7 153 aa17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 HKDC1Q2TB90 917 aa17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 LACTB2Q53H82 288 aaPredicted RBP17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 MRGPREQ86SM8 312 aa17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 RAB43Q86YS6 212 aa17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 METTL27Q8N6F8 245 aaPredicted RBP17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 CSNK1A1LQ8N752 337 aa17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 OR56A3Q8NH54 315 aa17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 ANKRD7Q92527 254 aa17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 HIST1H2AHQ96KK5 128 aa17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 HIST1H2AJQ99878 128 aa17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 H2AFJQ9BTM1 129 aa17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 LRRC4CQ9HCJ2 640 aa17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 MLXIPLQ9NP71 852 aa17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 ZDHHC18Q9NUE0 388 aa17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 ARL15Q9NXU5 204 aa17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 CTSFQ9UBX1 484 aa17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 NOVA2Q9UNW9 492 aaKnown RBP17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 RUVBL1Q9Y265 456 aaKnown RBP17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 HEMK1Q9Y5R4 338 aaPredicted RBP17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 MAU2Q9Y6X3 613 aa17.63■□□□□ 0.41
SHKBP1-202ENST00000593764 SPENQ96T58 3664 aaKnown RBP17.62■□□□□ 0.41
SHKBP1-202ENST00000593764 VSTM2BA6NLU5 285 aa17.62■□□□□ 0.41
SHKBP1-202ENST00000593764 CDC7O00311 574 aa17.62■□□□□ 0.41
SHKBP1-202ENST00000593764 P2RX6O15547 441 aa17.62■□□□□ 0.41
SHKBP1-202ENST00000593764 SLC28A2O43868 658 aa17.62■□□□□ 0.41
SHKBP1-202ENST00000593764 CEACAM4O75871 244 aa17.62■□□□□ 0.41
SHKBP1-202ENST00000593764 ENO2P09104 434 aaPredicted RBP17.62■□□□□ 0.41
SHKBP1-202ENST00000593764 CCND1P24385 295 aa17.62■□□□□ 0.41
SHKBP1-202ENST00000593764 SNRPNP63162 240 aaKnown RBP17.62■□□□□ 0.41
SHKBP1-202ENST00000593764 CSNK1G2P78368 415 aa17.62■□□□□ 0.41
SHKBP1-202ENST00000593764 GUCY2DQ02846 1103 aa17.62■□□□□ 0.41
SHKBP1-202ENST00000593764 MUM1Q2TAK8 710 aa17.62■□□□□ 0.41
SHKBP1-202ENST00000593764 C8orf74Q6P047 294 aa17.62■□□□□ 0.41
SHKBP1-202ENST00000593764 LCTLQ6UWM7 567 aa17.62■□□□□ 0.41
SHKBP1-202ENST00000593764 MED25Q71SY5 747 aa17.62■□□□□ 0.41
SHKBP1-202ENST00000593764 PRICKLE2Q7Z3G6 844 aa17.62■□□□□ 0.41
SHKBP1-202ENST00000593764 ADCK2Q7Z695 626 aa17.62■□□□□ 0.41
SHKBP1-202ENST00000593764 CCDC25Q86WR0 208 aa17.62■□□□□ 0.41
SHKBP1-202ENST00000593764 NKAPQ8N5F7 415 aaKnown RBP17.62■□□□□ 0.41
SHKBP1-202ENST00000593764 TMEM102Q8N9M5 508 aaPredicted RBP17.62■□□□□ 0.41
SHKBP1-202ENST00000593764 ZNF592Q92610 1267 aa17.62■□□□□ 0.41
SHKBP1-202ENST00000593764 PYCR2Q96C36 320 aa17.62■□□□□ 0.41
SHKBP1-202ENST00000593764 FBXL8Q96CD0 374 aa17.62■□□□□ 0.41
SHKBP1-202ENST00000593764 OR4K3Q96R72 315 aa17.62■□□□□ 0.41
SHKBP1-202ENST00000593764 SPSB2Q99619 263 aa17.62■□□□□ 0.41
SHKBP1-202ENST00000593764 CPNE1Q99829 537 aa17.62■□□□□ 0.41
SHKBP1-202ENST00000593764 TRIM54Q9BYV2 358 aa17.62■□□□□ 0.41
SHKBP1-202ENST00000593764 WDR54Q9H977 334 aa17.62■□□□□ 0.41
SHKBP1-202ENST00000593764 ACSS2Q9NR19 701 aa17.62■□□□□ 0.41
SHKBP1-202ENST00000593764 KCNE1BA0A087WTH5 132 aa17.61■□□□□ 0.41
SHKBP1-202ENST00000593764 GUCA1CO95843 209 aa17.61■□□□□ 0.41
SHKBP1-202ENST00000593764 POU4F1Q01851 419 aa17.61■□□□□ 0.41
SHKBP1-202ENST00000593764 ILF2Q12905 390 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-202ENST00000593764 PRMT9Q6P2P2 845 aa17.61■□□□□ 0.41
SHKBP1-202ENST00000593764 VN1R4Q7Z5H5 301 aa17.61■□□□□ 0.41
SHKBP1-202ENST00000593764 PPP1R32Q7Z5V6 425 aa17.61■□□□□ 0.41
SHKBP1-202ENST00000593764 C17orf64Q86WR6 236 aa17.61■□□□□ 0.41
SHKBP1-202ENST00000593764 MMGT1Q8N4V1 131 aa17.61■□□□□ 0.41
SHKBP1-202ENST00000593764 CDKL2Q92772 493 aa17.61■□□□□ 0.41
SHKBP1-202ENST00000593764 RERGQ96A58 199 aaPredicted RBP17.61■□□□□ 0.41
SHKBP1-202ENST00000593764 ALKBH8Q96BT7 664 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-202ENST00000593764 CABS1Q96KC9 395 aa17.61■□□□□ 0.41
SHKBP1-202ENST00000593764 IP6K3Q96PC2 410 aa17.61■□□□□ 0.41
SHKBP1-202ENST00000593764 GPR22Q99680 433 aa17.61■□□□□ 0.41
SHKBP1-202ENST00000593764 RBBP8Q99708 897 aa17.61■□□□□ 0.41
SHKBP1-202ENST00000593764 CAB39LQ9H9S4 337 aa17.61■□□□□ 0.41
SHKBP1-202ENST00000593764 POPDC3Q9HBV1 291 aa17.61■□□□□ 0.41
SHKBP1-202ENST00000593764 ZNF304Q9HCX3 659 aa17.61■□□□□ 0.41
SHKBP1-202ENST00000593764 PCDHGA9Q9Y5G4 932 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-202ENST00000593764 NPEPPSL1A6NEC2 478 aa17.6■□□□□ 0.41
SHKBP1-202ENST00000593764 J3QKU1 62 aa17.6■□□□□ 0.41
SHKBP1-202ENST00000593764 FOXS1O43638 330 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms