RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 POP5Q969H6 163 aaKnown RBP19.03■□□□□ 0.64
CLIP3-206ENST00000593074 FAM162AQ96A26 154 aa19.03■□□□□ 0.64
CLIP3-206ENST00000593074 ERLEC1Q96DZ1 483 aa19.03■□□□□ 0.64
CLIP3-206ENST00000593074 GRIP2Q9C0E4 1043 aa19.03■□□□□ 0.64
CLIP3-206ENST00000593074 REXO4Q9GZR2 422 aaKnown RBP19.03■□□□□ 0.64
CLIP3-206ENST00000593074 DCAF13Q9NV06 445 aaKnown RBP19.03■□□□□ 0.64
CLIP3-206ENST00000593074 GPR34Q9UPC5 381 aa19.03■□□□□ 0.64
CLIP3-206ENST00000593074 MAGEB17A8MXT2 336 aa19.02■□□□□ 0.64
CLIP3-206ENST00000593074 VEGFDO43915 354 aa19.02■□□□□ 0.64
CLIP3-206ENST00000593074 SCN2BO60939 215 aa19.02■□□□□ 0.64
CLIP3-206ENST00000593074 CREG1O75629 220 aa19.02■□□□□ 0.64
CLIP3-206ENST00000593074 OR6B1O95007 311 aa19.02■□□□□ 0.64
CLIP3-206ENST00000593074 ETHE1O95571 254 aa19.02■□□□□ 0.64
CLIP3-206ENST00000593074 IL1RNP18510 177 aa19.02■□□□□ 0.64
CLIP3-206ENST00000593074 NELFEP18615 380 aaKnown RBP19.02■□□□□ 0.64
CLIP3-206ENST00000593074 GDI1P31150 447 aa19.02■□□□□ 0.64
CLIP3-206ENST00000593074 P2RY2P41231 377 aa19.02■□□□□ 0.64
CLIP3-206ENST00000593074 WNT3P56703 355 aa19.02■□□□□ 0.64
CLIP3-206ENST00000593074 DUOXA1Q1HG43 343 aa19.02■□□□□ 0.64
CLIP3-206ENST00000593074 CYBRD1Q53TN4 286 aa19.02■□□□□ 0.64
CLIP3-206ENST00000593074 EGFLAMQ63HQ2 1017 aa19.02■□□□□ 0.64
CLIP3-206ENST00000593074 CAPN13Q6MZZ7 669 aaPredicted RBP19.02■□□□□ 0.64
CLIP3-206ENST00000593074 OR7A2PQ8NGA2 310 aa19.02■□□□□ 0.64
CLIP3-206ENST00000593074 HM13Q8TCT9 377 aa19.02■□□□□ 0.64
CLIP3-206ENST00000593074 STARD8Q92502 1023 aa19.02■□□□□ 0.64
CLIP3-206ENST00000593074 ELSPBP1Q96BH3 223 aa19.02■□□□□ 0.64
CLIP3-206ENST00000593074 WDR34Q96EX3 536 aa19.02■□□□□ 0.64
CLIP3-206ENST00000593074 SLC47A1Q96FL8 570 aa19.02■□□□□ 0.64
CLIP3-206ENST00000593074 HAUS8Q9BT25 410 aa19.02■□□□□ 0.64
CLIP3-206ENST00000593074 SGPP1Q9BX95 441 aa19.02■□□□□ 0.64
CLIP3-206ENST00000593074 DPEP2Q9H4A9 486 aa19.02■□□□□ 0.64
CLIP3-206ENST00000593074 FAM120CQ9NX05 1096 aaKnown RBP19.02■□□□□ 0.64
CLIP3-206ENST00000593074 APODP05090 189 aa19.02■□□□□ 0.63
CLIP3-206ENST00000593074 ZNF8P17098 575 aaPredicted RBP19.02■□□□□ 0.63
CLIP3-206ENST00000593074 GSTT1P30711 240 aa19.02■□□□□ 0.63
CLIP3-206ENST00000593074 CAPGP40121 348 aa19.02■□□□□ 0.63
CLIP3-206ENST00000593074 RAE1P78406 368 aaKnown RBP19.02■□□□□ 0.63
CLIP3-206ENST00000593074 KCTD21Q4G0X4 260 aa19.02■□□□□ 0.63
CLIP3-206ENST00000593074 ADNP2Q6IQ32 1131 aa19.02■□□□□ 0.63
CLIP3-206ENST00000593074 TMEM214Q6NUQ4 689 aaKnown RBP19.02■□□□□ 0.63
CLIP3-206ENST00000593074 TBPL2Q6SJ96 375 aa19.02■□□□□ 0.63
CLIP3-206ENST00000593074 FKBP9P1Q75LS8 142 aa19.02■□□□□ 0.63
CLIP3-206ENST00000593074 SYTL1Q8IYJ3 562 aa19.02■□□□□ 0.63
CLIP3-206ENST00000593074 OR2L2Q8NH16 312 aa19.02■□□□□ 0.63
CLIP3-206ENST00000593074 HUS1BQ8NHY5 278 aa19.02■□□□□ 0.63
CLIP3-206ENST00000593074 MAGEE2Q8TD90 523 aaPredicted RBP19.02■□□□□ 0.63
CLIP3-206ENST00000593074 TMBIM1Q969X1 311 aa19.02■□□□□ 0.63
CLIP3-206ENST00000593074 CHFRQ96EP1 664 aa19.02■□□□□ 0.63
CLIP3-206ENST00000593074 RBM38Q9H0Z9 239 aaKnown RBP19.02■□□□□ 0.63
CLIP3-206ENST00000593074 MAGIXQ9H6Y5 334 aa19.02■□□□□ 0.63
CLIP3-206ENST00000593074 CAAP1Q9H8G2 361 aa19.02■□□□□ 0.63
CLIP3-206ENST00000593074 CLK4Q9HAZ1 481 aaKnown RBP19.02■□□□□ 0.63
CLIP3-206ENST00000593074 FADS3Q9Y5Q0 445 aa19.02■□□□□ 0.63
CLIP3-206ENST00000593074 MYO1DO94832 1006 aa19.01■□□□□ 0.63
CLIP3-206ENST00000593074 COX7A2P14406 83 aa19.01■□□□□ 0.63
CLIP3-206ENST00000593074 HOXB6P17509 224 aaKnown RBP19.01■□□□□ 0.63
CLIP3-206ENST00000593074 MTHFRP42898 656 aa19.01■□□□□ 0.63
CLIP3-206ENST00000593074 CNTN1Q12860 1018 aa19.01■□□□□ 0.63
CLIP3-206ENST00000593074 SLC14A1Q13336 389 aa19.01■□□□□ 0.63
CLIP3-206ENST00000593074 PON2Q15165 354 aa19.01■□□□□ 0.63
CLIP3-206ENST00000593074 ITPRIPL2Q3MIP1 535 aa19.01■□□□□ 0.63
CLIP3-206ENST00000593074 SPIN4Q56A73 249 aa19.01■□□□□ 0.63
CLIP3-206ENST00000593074 C10orf62Q5T681 223 aaPredicted RBP19.01■□□□□ 0.63
CLIP3-206ENST00000593074 CES5AQ6NT32 575 aa19.01■□□□□ 0.63
CLIP3-206ENST00000593074 PARM1Q6UWI2 310 aa19.01■□□□□ 0.63
CLIP3-206ENST00000593074 GPR155Q7Z3F1 870 aa19.01■□□□□ 0.63
CLIP3-206ENST00000593074 TMPRSS11BQ86T26 416 aa19.01■□□□□ 0.63
CLIP3-206ENST00000593074 DHRSXQ8N5I4 330 aa19.01■□□□□ 0.63
CLIP3-206ENST00000593074 OR9A1PQ8NGU1 263 aa19.01■□□□□ 0.63
CLIP3-206ENST00000593074 NCLNQ969V3 563 aa19.01■□□□□ 0.63
CLIP3-206ENST00000593074 DGCR14Q96DF8 476 aaKnown RBP19.01■□□□□ 0.63
CLIP3-206ENST00000593074 ITM2CQ9NQX7 267 aa19.01■□□□□ 0.63
CLIP3-206ENST00000593074 DNAJB9Q9UBS3 223 aa19.01■□□□□ 0.63
CLIP3-206ENST00000593074 STON1Q9Y6Q2 735 aa19.01■□□□□ 0.63
CLIP3-206ENST00000593074 SCAMP2O15127 329 aaKnown RBP19.01■□□□□ 0.63
CLIP3-206ENST00000593074 PRKD3O94806 890 aa19.01■□□□□ 0.63
CLIP3-206ENST00000593074 PCNAP12004 261 aa19.01■□□□□ 0.63
CLIP3-206ENST00000593074 LAMP2P13473 410 aa19.01■□□□□ 0.63
CLIP3-206ENST00000593074 NPPBP16860 134 aa19.01■□□□□ 0.63
CLIP3-206ENST00000593074 ACADLP28330 430 aa19.01■□□□□ 0.63
CLIP3-206ENST00000593074 ARSFP54793 590 aa19.01■□□□□ 0.63
CLIP3-206ENST00000593074 MED27Q6P2C8 311 aa19.01■□□□□ 0.63
CLIP3-206ENST00000593074 ZNF551Q7Z340 670 aaPredicted RBP19.01■□□□□ 0.63
CLIP3-206ENST00000593074 C11orf96Q7Z7L8 435 aa19.01■□□□□ 0.63
CLIP3-206ENST00000593074 SERPINA11Q86U17 422 aa19.01■□□□□ 0.63
CLIP3-206ENST00000593074 LRRC56Q8IYG6 542 aaPredicted RBP19.01■□□□□ 0.63
CLIP3-206ENST00000593074 C1orf52Q8N6N3 182 aaKnown RBP19.01■□□□□ 0.63
CLIP3-206ENST00000593074 CHTF18Q8WVB6 975 aa19.01■□□□□ 0.63
CLIP3-206ENST00000593074 CYGBQ8WWM9 190 aa19.01■□□□□ 0.63
CLIP3-206ENST00000593074 REPS1Q96D71 796 aa19.01■□□□□ 0.63
CLIP3-206ENST00000593074 COX14Q96I36 57 aa19.01■□□□□ 0.63
CLIP3-206ENST00000593074 HIC2Q96JB3 615 aa19.01■□□□□ 0.63
CLIP3-206ENST00000593074 EHD1Q9H4M9 534 aa19.01■□□□□ 0.63
CLIP3-206ENST00000593074 PAPOLBQ9NRJ5 636 aaKnown RBP19.01■□□□□ 0.63
CLIP3-206ENST00000593074 TRIM64A6NGJ6 449 aa19■□□□□ 0.63
CLIP3-206ENST00000593074 POP7O75817 140 aaKnown RBP19■□□□□ 0.63
CLIP3-206ENST00000593074 SNAP29O95721 258 aa19■□□□□ 0.63
CLIP3-206ENST00000593074 ASMTP46597 345 aa19■□□□□ 0.63
CLIP3-206ENST00000593074 ALDH3A2P51648 485 aa19■□□□□ 0.63
CLIP3-206ENST00000593074 TUBA4AP68366 448 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms