RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 WFDC12Q8WWY7 111 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 NCSTNQ92542 709 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 TSNARE1Q96NA8 513 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 IL17FQ96PD4 163 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 TGM7Q96PF1 710 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 NRTNQ99748 197 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 NUDT22Q9BRQ3 303 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 FUT8Q9BYC5 575 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 VPS11Q9H270 941 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 LRRN3Q9H3W5 708 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 SRMSQ9H3Y6 488 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 RDH14Q9HBH5 336 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 POPDC3Q9HBV1 291 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 SLC40A1Q9NP59 571 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 ARGLU1Q9NWB6 273 aaPredicted RBP6.2□□□□□ -1.42
VPS4B-205ENST00000591383 DLL3Q9NYJ7 618 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 SLC24A2Q9UI40 661 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 ZNF180Q9UJW8 692 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 ICKQ9UPZ9 632 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 VWA7Q9Y334 891 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 PCNX2A6NKB5 2137 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 SNRNP200O75643 2136 aaKnown RBP6.2□□□□□ -1.42
VPS4B-205ENST00000591383 PTPRBP23467 1997 aa6.2□□□□□ -1.42
VPS4B-205ENST00000591383 UNC13CQ8NB66 2214 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 A0A087X1B8 175 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 A0A096LPK6 155 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 IQANK1A0A1B0GTG1 560 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 FAM149AA5PLN7 773 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 OR5K3A6NET4 321 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 NCF1BA6NI72 391 aaPredicted RBP6.19□□□□□ -1.42
VPS4B-205ENST00000591383 A8MU76 341 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 NCF1CA8MVU1 366 aaPredicted RBP6.19□□□□□ -1.42
VPS4B-205ENST00000591383 SUPT3HB4E1H0 165 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 EIF3FO00303 357 aaPredicted RBP6.19□□□□□ -1.42
VPS4B-205ENST00000591383 CDC7O00311 574 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 HYAL3O43820 417 aaPredicted RBP6.19□□□□□ -1.42
VPS4B-205ENST00000591383 CSO75390 466 aaKnown RBP6.19□□□□□ -1.42
VPS4B-205ENST00000591383 SUPT3HO75486 399 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 C1orf105O95561 183 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 CPNE6O95741 557 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 GUCA1CO95843 209 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 TSPAN12O95859 305 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 TOP3BO95985 862 aaKnown RBP6.19□□□□□ -1.42
VPS4B-205ENST00000591383 ALDOAP04075 364 aaKnown RBP6.19□□□□□ -1.42
VPS4B-205ENST00000591383 C8GP07360 202 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 SNRPAP09012 282 aaKnown RBP6.19□□□□□ -1.42
VPS4B-205ENST00000591383 FAM87AP0C7U9 286 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 SLC35E2BP0CK96 405 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 CCDC166P0CW27 439 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 NCF1P14598 390 aaPredicted RBP6.19□□□□□ -1.42
VPS4B-205ENST00000591383 KRT15P19012 456 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 POLR2CP19387 275 aaPredicted RBP6.19□□□□□ -1.42
VPS4B-205ENST00000591383 TFEBP19484 476 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 CNTFP26441 200 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 ACADLP28330 430 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 GCAP28676 217 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 CRABP2P29373 138 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 TYK2P29597 1187 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 SKIV2L2P42285 1042 aaKnown RBP6.19□□□□□ -1.42
VPS4B-205ENST00000591383 GPR3P46089 330 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 GLRBP48167 497 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 LSSP48449 732 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 SEPHS1P49903 392 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 TIAL1Q01085 375 aaKnown RBP eCLIP6.19□□□□□ -1.42
VPS4B-205ENST00000591383 INSM1Q01101 510 aaPredicted RBP6.19□□□□□ -1.42
VPS4B-205ENST00000591383 PRKAA1Q13131 559 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 ILKQ13418 452 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 NR1D2Q14995 579 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 TSNQ15631 228 aaKnown RBP6.19□□□□□ -1.42
VPS4B-205ENST00000591383 ZKSCAN8Q15776 578 aaPredicted RBP6.19□□□□□ -1.42
VPS4B-205ENST00000591383 KRT71Q3SY84 523 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 CCSMST1Q4G0I0 132 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 TMEM177Q53S58 311 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 LGSNQ5TDP6 509 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 THEMIS2Q5TEJ8 643 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 KLC3Q6P597 504 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 KLHL35Q6PF15 583 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 FBXO38Q6PIJ6 1188 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 FAM92BQ6ZTR7 304 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 NEK10Q6ZWH5 1172 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 CYS1Q717R9 158 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 B3GNT8Q7Z7M8 397 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 TRIM73Q86UV7 250 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 AMIGO1Q86WK6 493 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 MARCH9Q86YJ5 346 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 FAM20CQ8IXL6 584 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 SYTL1Q8IYJ3 562 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 ARMC10Q8N2F6 343 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 MREGQ8N565 214 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 NKAPQ8N5F7 415 aaKnown RBP6.19□□□□□ -1.42
VPS4B-205ENST00000591383 OR4E2Q8NGC2 313 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 ANKRD49Q8WVL7 239 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 RAD51AP1Q96B01 352 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 MED8Q96G25 268 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 SCYL1Q96KG9 808 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 RUFY1Q96T51 708 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 EGFL8Q99944 293 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 MENTQ9BUN1 341 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 RAB11FIP5Q9BXF6 653 aa6.19□□□□□ -1.42
VPS4B-205ENST00000591383 SLC12A9Q9BXP2 914 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms