RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 LOC102723532A0A0G2JNH3 316 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 A0A1B0GX78 115 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 C9J4A7 227 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 POC1B-GALNT4F8VUJ3 575 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 H7BY64 318 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 TXNDC9O14530 226 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 SLU7O95391 586 aaKnown RBP11.38□□□□□ -0.59
LIG3-213ENST00000590630 RECKO95980 971 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 ALDOAP04075 364 aaKnown RBP11.38□□□□□ -0.59
LIG3-213ENST00000590630 C2P06681 752 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 RAB40ALP0C0E4 278 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 MYBL2P10244 700 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 F8A1P23610 371 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 TYK2P29597 1187 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 GRK3P35626 688 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 EMP3P54852 163 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 RPS15AP62244 130 aaKnown RBP11.38□□□□□ -0.59
LIG3-213ENST00000590630 RPS15P62841 145 aaKnown RBP11.38□□□□□ -0.59
LIG3-213ENST00000590630 RHDQ02161 417 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 OR4D1Q15615 310 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 FAM83EQ2M2I3 478 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 PTCHD3Q3KNS1 767 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 WASHC2DQ5SRD0 308 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 ZNF385CQ66K41 422 aaPredicted RBP11.38□□□□□ -0.59
LIG3-213ENST00000590630 FRMPD2BQ6IN97 320 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 FAM199XQ6PEV8 388 aaPredicted RBP11.38□□□□□ -0.59
LIG3-213ENST00000590630 GSPT2Q8IYD1 628 aaKnown RBP11.38□□□□□ -0.59
LIG3-213ENST00000590630 OR4N4Q8N0Y3 316 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 TTC29Q8NA56 475 aaPredicted RBP11.38□□□□□ -0.59
LIG3-213ENST00000590630 ABHD11Q8NFV4 315 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 UHMK1Q8TAS1 419 aaKnown RBP11.38□□□□□ -0.59
LIG3-213ENST00000590630 STAG3L4Q8TBR4 150 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 DCAKDQ8WVC6 231 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 ISL2Q96A47 359 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 ALKBH8Q96BT7 664 aaKnown RBP11.38□□□□□ -0.59
LIG3-213ENST00000590630 PTERQ96BW5 349 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 RHBDF1Q96CC6 855 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 PRAP1Q96NZ9 151 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 GBP5Q96PP8 586 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 OR2A5Q96R48 311 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 OR4K3Q96R72 315 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 NLNQ9BYT8 704 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 UNKQ9C0B0 810 aaKnown RBP11.38□□□□□ -0.59
LIG3-213ENST00000590630 CHST8Q9H2A9 424 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 ANKZF1Q9H8Y5 726 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 CNOT10Q9H9A5 744 aaKnown RBP11.38□□□□□ -0.59
LIG3-213ENST00000590630 AKIRIN1Q9H9L7 192 aaPredicted RBP11.38□□□□□ -0.59
LIG3-213ENST00000590630 IGSF5Q9NSI5 407 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 CUTCQ9NTM9 273 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 DHCR7Q9UBM7 475 aaKnown RBP11.38□□□□□ -0.59
LIG3-213ENST00000590630 FETUBQ9UGM5 382 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 RNF112Q9ULX5 631 aa11.38□□□□□ -0.59
LIG3-213ENST00000590630 SMG1Q96Q15 3661 aaKnown RBP11.38□□□□□ -0.59
LIG3-213ENST00000590630 KCNE1BA0A087WTH5 132 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 A0A096LPK6 155 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 HYKKA2RU49 373 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 H0YGG7 62 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 HAT1O14929 419 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 DSCR3O14972 297 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 KERAO60938 352 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 KATNA1O75449 491 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 IPO13O94829 963 aaKnown RBP11.37□□□□□ -0.59
LIG3-213ENST00000590630 S100BP04271 92 aaPredicted RBP11.37□□□□□ -0.59
LIG3-213ENST00000590630 ITGB2P05107 769 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 EIF2S1P05198 315 aaKnown RBP11.37□□□□□ -0.59
LIG3-213ENST00000590630 CD63P08962 238 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 CDH1P12830 882 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 TFEBP19484 476 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 PTPN4P29074 926 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 GGT5P36269 586 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 SLC6A12P48065 614 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 CCR8P51685 355 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 ARF3P61204 181 aaPredicted RBP11.37□□□□□ -0.59
LIG3-213ENST00000590630 CSNK1G2P78368 415 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 DCDP81605 110 aaKnown RBP11.37□□□□□ -0.59
LIG3-213ENST00000590630 DLG1Q12959 904 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 SLC29A2Q14542 456 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 NCF4Q15080 339 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 PRTGQ2VWP7 1150 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 LGSNQ5TDP6 509 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 SULT1C3Q6IMI6 304 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 KLC3Q6P597 504 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 FAM198BQ6UWH4 519 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 TTLL10Q6ZVT0 673 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 ISCA2Q86U28 154 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 THOC6Q86W42 341 aaKnown RBP11.37□□□□□ -0.59
LIG3-213ENST00000590630 KLHDC8AQ8IYD2 350 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 CENPLQ8N0S6 344 aaPredicted RBP11.37□□□□□ -0.59
LIG3-213ENST00000590630 CSNK1A1LQ8N752 337 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 PDPRQ8NCN5 879 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 RHEBL1Q8TAI7 183 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 THAP11Q96EK4 314 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 CATSPER2Q96P56 530 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 DHRS4Q9BTZ2 278 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 ACTL8Q9H568 366 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 ALG9Q9H6U8 611 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 STARD5Q9NSY2 213 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 SH2B3Q9UQQ2 575 aa11.37□□□□□ -0.59
LIG3-213ENST00000590630 FARSAQ9Y285 508 aaKnown RBP11.37□□□□□ -0.59
LIG3-213ENST00000590630 PADI2Q9Y2J8 665 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms