RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 C1QBP02746 253 aa14.74□□□□□ -0.05
CIRBP-228ENST00000590347 ITGAMP11215 1152 aa14.74□□□□□ -0.05
CIRBP-228ENST00000590347 TALDO1P37837 337 aa14.74□□□□□ -0.05
CIRBP-228ENST00000590347 CAMK2GQ13555 558 aaPredicted RBP14.74□□□□□ -0.05
CIRBP-228ENST00000590347 AP5B1Q2VPB7 878 aa14.74□□□□□ -0.05
CIRBP-228ENST00000590347 TIGD7Q6NT04 549 aaPredicted RBP14.74□□□□□ -0.05
CIRBP-228ENST00000590347 PRSS42Q7Z5A4 293 aa14.74□□□□□ -0.05
CIRBP-228ENST00000590347 SLC34A3Q8N130 599 aa14.74□□□□□ -0.05
CIRBP-228ENST00000590347 MGLLQ99685 303 aa14.74□□□□□ -0.05
CIRBP-228ENST00000590347 RACGAP1Q9H0H5 632 aa14.74□□□□□ -0.05
CIRBP-228ENST00000590347 CATSPERBQ9H7T0 1116 aa14.74□□□□□ -0.05
CIRBP-228ENST00000590347 CCNB1IP1Q9NPC3 277 aa14.74□□□□□ -0.05
CIRBP-228ENST00000590347 ING3Q9NXR8 418 aa14.74□□□□□ -0.05
CIRBP-228ENST00000590347 B3GNT2Q9NY97 397 aa14.74□□□□□ -0.05
CIRBP-228ENST00000590347 DOCK1Q14185 1865 aa14.73□□□□□ -0.05
CIRBP-228ENST00000590347 RLFQ13129 1914 aa14.73□□□□□ -0.05
CIRBP-228ENST00000590347 FAM240BA0A1B0GVZ2 78 aa14.73□□□□□ -0.05
CIRBP-228ENST00000590347 ATG13O75143 517 aa14.73□□□□□ -0.05
CIRBP-228ENST00000590347 PPM1BO75688 479 aa14.73□□□□□ -0.05
CIRBP-228ENST00000590347 ERVK-8P63133 956 aa14.73□□□□□ -0.05
CIRBP-228ENST00000590347 RGS1Q08116 209 aa14.73□□□□□ -0.05
CIRBP-228ENST00000590347 PWP1Q13610 501 aa14.73□□□□□ -0.05
CIRBP-228ENST00000590347 PAQR3Q6TCH7 311 aa14.73□□□□□ -0.05
CIRBP-228ENST00000590347 METTL7BQ6UX53 244 aa14.73□□□□□ -0.05
CIRBP-228ENST00000590347 CNTN4Q8IWV2 1026 aa14.73□□□□□ -0.05
CIRBP-228ENST00000590347 C9orf62Q8N4C0 152 aa14.73□□□□□ -0.05
CIRBP-228ENST00000590347 WDR36Q8NI36 951 aaKnown RBP14.73□□□□□ -0.05
CIRBP-228ENST00000590347 DCAF13Q9NV06 445 aaKnown RBP14.73□□□□□ -0.05
CIRBP-228ENST00000590347 TMEM184CQ9NVA4 438 aa14.73□□□□□ -0.05
CIRBP-228ENST00000590347 CACNG4Q9UBN1 327 aa14.73□□□□□ -0.05
CIRBP-228ENST00000590347 DIMT1Q9UNQ2 313 aaKnown RBP14.73□□□□□ -0.05
CIRBP-228ENST00000590347 COMMD10Q9Y6G5 202 aa14.73□□□□□ -0.05
CIRBP-228ENST00000590347 ARPC4-TTLL3A0A0A6YYG9 625 aa14.73□□□□□ -0.05
CIRBP-228ENST00000590347 A0A1B0GVC2 190 aa14.73□□□□□ -0.05
CIRBP-228ENST00000590347 A0A1W2PQL4 384 aaPredicted RBP14.73□□□□□ -0.05
CIRBP-228ENST00000590347 A6NIN4 97 aa14.73□□□□□ -0.05
CIRBP-228ENST00000590347 ECI2O75521 394 aa14.73□□□□□ -0.05
CIRBP-228ENST00000590347 CFDP00746 253 aaPredicted RBP14.73□□□□□ -0.05
CIRBP-228ENST00000590347 HOXD4P09016 255 aaPredicted RBP14.73□□□□□ -0.05
CIRBP-228ENST00000590347 ARHGDIBP52566 201 aa14.73□□□□□ -0.05
CIRBP-228ENST00000590347 SNAPC1Q16533 368 aa14.73□□□□□ -0.05
CIRBP-228ENST00000590347 ANKS6Q68DC2 871 aa14.73□□□□□ -0.05
CIRBP-228ENST00000590347 OR2T5Q6IEZ7 315 aa14.73□□□□□ -0.05
CIRBP-228ENST00000590347 LSM14AQ8ND56 463 aaKnown RBP14.73□□□□□ -0.05
CIRBP-228ENST00000590347 OR2T29Q8NH02 315 aa14.73□□□□□ -0.05
CIRBP-228ENST00000590347 METTL6Q8TCB7 284 aa14.73□□□□□ -0.05
CIRBP-228ENST00000590347 ZNF431Q8TF32 576 aaPredicted RBP14.73□□□□□ -0.05
CIRBP-228ENST00000590347 GPR20Q99678 358 aa14.73□□□□□ -0.05
CIRBP-228ENST00000590347 SEC22CQ9BRL7 303 aa14.73□□□□□ -0.05
CIRBP-228ENST00000590347 INPP5KQ9BT40 448 aa14.73□□□□□ -0.05
CIRBP-228ENST00000590347 FARSBQ9NSD9 589 aaKnown RBP14.73□□□□□ -0.05
CIRBP-228ENST00000590347 FAM105AQ9NUU6 356 aa14.73□□□□□ -0.05
CIRBP-228ENST00000590347 RBM22Q9NW64 420 aaKnown RBP eCLIP14.73□□□□□ -0.055e-7■■■□□ 16.7
CIRBP-228ENST00000590347 VPS9D1Q9Y2B5 631 aa14.73□□□□□ -0.05
CIRBP-228ENST00000590347 BTN3A1O00481 513 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 SEC22BO75396 215 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 VTNP04004 478 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 CYP17A1P05093 508 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 HLA-DQB2P05538 268 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 ERVFC1P60507 584 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 ERVK-21P61565 698 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 KDM4DQ6B0I6 523 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 PDE12Q6L8Q7 609 aaKnown RBP14.72□□□□□ -0.05
CIRBP-228ENST00000590347 SLC13A3Q8WWT9 602 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 KLHL5Q96PQ7 755 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 DCLRE1CQ96SD1 692 aaKnown RBP14.72□□□□□ -0.05
CIRBP-228ENST00000590347 BEX1Q9HBH7 125 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 RLIMQ9NVW2 624 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 MS4A12Q9NXJ0 267 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 COMMD3Q9UBI1 195 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 OR12D3Q9UGF7 316 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 CLEC2DQ9UHP7 191 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 BRCA1P38398 1863 aaKnown RBP14.72□□□□□ -0.05
CIRBP-228ENST00000590347 ACKR2O00590 384 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 PCDH17O14917 1159 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 CDRT1O95170 752 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 PER3P56645 1201 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 ZXDBP98169 803 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 HNRNPA0Q13151 305 aaKnown RBP14.72□□□□□ -0.05
CIRBP-228ENST00000590347 LARS2Q15031 903 aaKnown RBP14.72□□□□□ -0.05
CIRBP-228ENST00000590347 SSX1Q16384 188 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 PROX2Q3B8N5 592 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 LRRC66Q68CR7 880 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 EFCAB12Q6NXP0 572 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 SHQ1Q6PI26 577 aaKnown RBP14.72□□□□□ -0.05
CIRBP-228ENST00000590347 TEX261Q6UWH6 196 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 LSRQ86X29 649 aaPredicted RBP14.72□□□□□ -0.05
CIRBP-228ENST00000590347 CILP2Q8IUL8 1156 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 LINC00518Q8N0U6 118 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 DNAJC5GQ8N7S2 189 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 OR11H4Q8NGC9 324 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 PYURFQ96I23 114 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 QRFPRQ96P65 431 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 GOLGA2P5Q9HBQ8 144 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 PSORS1C1Q9UIG5 152 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 U3KQ87 197 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 PIPSLA2A3N6 862 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 FGF4P08620 206 aa14.72□□□□□ -0.05
CIRBP-228ENST00000590347 RPS5P46782 204 aaKnown RBP14.72□□□□□ -0.05
CIRBP-228ENST00000590347 EFNA5P52803 228 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms