RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 ZIC1Q15915 447 aa13.08□□□□□ -0.32
VMP1-210ENST00000589823 XKR6Q5GH73 641 aa13.08□□□□□ -0.32
VMP1-210ENST00000589823 CATSPEREQ5SY80 951 aa13.08□□□□□ -0.32
VMP1-210ENST00000589823 ATG9BQ674R7 924 aa13.08□□□□□ -0.32
VMP1-210ENST00000589823 ZNF425Q6IV72 752 aa13.08□□□□□ -0.32
VMP1-210ENST00000589823 CYB5D1Q6P9G0 228 aa13.08□□□□□ -0.32
VMP1-210ENST00000589823 SLCO4C1Q6ZQN7 724 aa13.08□□□□□ -0.32
VMP1-210ENST00000589823 RPS27LQ71UM5 84 aaKnown RBP13.08□□□□□ -0.32
VMP1-210ENST00000589823 TMPRSS7Q7RTY8 843 aa13.08□□□□□ -0.32
VMP1-210ENST00000589823 PAQR7Q86WK9 346 aa13.08□□□□□ -0.32
VMP1-210ENST00000589823 FAM129CQ86XR2 697 aa13.08□□□□□ -0.32
VMP1-210ENST00000589823 KRT78Q8N1N4 520 aa13.08□□□□□ -0.32
VMP1-210ENST00000589823 D2HGDHQ8N465 521 aa13.08□□□□□ -0.32
VMP1-210ENST00000589823 TRPC4APQ8TEL6 797 aa13.08□□□□□ -0.32
VMP1-210ENST00000589823 NSUN5Q96P11 429 aaKnown RBP13.08□□□□□ -0.32
VMP1-210ENST00000589823 AIF1LQ9BQI0 150 aa13.08□□□□□ -0.32
VMP1-210ENST00000589823 EFCAB11Q9BUY7 163 aa13.08□□□□□ -0.32
VMP1-210ENST00000589823 CHRNA10Q9GZZ6 450 aa13.08□□□□□ -0.32
VMP1-210ENST00000589823 EHD1Q9H4M9 534 aa13.08□□□□□ -0.32
VMP1-210ENST00000589823 NOL11Q9H8H0 719 aaKnown RBP13.08□□□□□ -0.32
VMP1-210ENST00000589823 ACTR8Q9H981 624 aa13.08□□□□□ -0.32
VMP1-210ENST00000589823 FANCEQ9HB96 536 aa13.08□□□□□ -0.32
VMP1-210ENST00000589823 SEMA4BQ9NPR2 832 aaPredicted RBP13.08□□□□□ -0.32
VMP1-210ENST00000589823 CCDC187A0A096LP49 1063 aa13.07□□□□□ -0.32
VMP1-210ENST00000589823 EFCAB7A8K855 629 aa13.07□□□□□ -0.32
VMP1-210ENST00000589823 HAT1O14929 419 aa13.07□□□□□ -0.32
VMP1-210ENST00000589823 PRAMEF10O60809 474 aa13.07□□□□□ -0.32
VMP1-210ENST00000589823 OTCP00480 354 aa13.07□□□□□ -0.32
VMP1-210ENST00000589823 EZRP15311 586 aaKnown RBP13.07□□□□□ -0.32
VMP1-210ENST00000589823 TSPAN8P19075 237 aa13.07□□□□□ -0.32
VMP1-210ENST00000589823 EPORP19235 508 aa13.07□□□□□ -0.32
VMP1-210ENST00000589823 VARSP26640 1264 aaKnown RBP13.07□□□□□ -0.32
VMP1-210ENST00000589823 EIF3IQ13347 325 aaKnown RBP13.07□□□□□ -0.32
VMP1-210ENST00000589823 LAPTM5Q13571 262 aa13.07□□□□□ -0.32
VMP1-210ENST00000589823 DOC2AQ14183 400 aa13.07□□□□□ -0.32
VMP1-210ENST00000589823 SLBPQ14493 270 aaKnown RBP eCLIP13.07□□□□□ -0.32
VMP1-210ENST00000589823 KCNAB1Q14722 419 aa13.07□□□□□ -0.32
VMP1-210ENST00000589823 TBCCQ15814 346 aa13.07□□□□□ -0.32
VMP1-210ENST00000589823 HIST2H2ACQ16777 129 aaPredicted RBP13.07□□□□□ -0.32
VMP1-210ENST00000589823 PAGE2BQ5JRK9 111 aa13.07□□□□□ -0.32
VMP1-210ENST00000589823 HIST2H2AA3Q6FI13 130 aa13.07□□□□□ -0.32
VMP1-210ENST00000589823 FRMD7Q6ZUT3 714 aa13.07□□□□□ -0.32
VMP1-210ENST00000589823 RAB11FIP2Q7L804 512 aa13.07□□□□□ -0.32
VMP1-210ENST00000589823 DGLUCYQ7Z3D6 616 aa13.07□□□□□ -0.32
VMP1-210ENST00000589823 MILR1Q7Z6M3 343 aa13.07□□□□□ -0.32
VMP1-210ENST00000589823 MYLK4Q86YV6 388 aaPredicted RBP13.07□□□□□ -0.32
VMP1-210ENST00000589823 ARFGAP2Q8N6H7 521 aa13.07□□□□□ -0.32
VMP1-210ENST00000589823 OR4K1Q8NGD4 311 aa13.07□□□□□ -0.32
VMP1-210ENST00000589823 PTCD3Q96EY7 689 aaKnown RBP13.07□□□□□ -0.32
VMP1-210ENST00000589823 MAGEB10Q96LZ2 347 aaPredicted RBP13.07□□□□□ -0.32
VMP1-210ENST00000589823 ZFYVE21Q9BQ24 234 aa13.07□□□□□ -0.32
VMP1-210ENST00000589823 GATA5Q9BWX5 397 aaPredicted RBP13.07□□□□□ -0.32
VMP1-210ENST00000589823 DRC3Q9H069 523 aa13.07□□□□□ -0.32
VMP1-210ENST00000589823 GSTO2Q9H4Y5 243 aa13.07□□□□□ -0.32
VMP1-210ENST00000589823 PRM3Q9NNZ6 103 aa13.07□□□□□ -0.32
VMP1-210ENST00000589823 FAM60AQ9NP50 221 aa13.07□□□□□ -0.32
VMP1-210ENST00000589823 ACSS2Q9NR19 701 aa13.07□□□□□ -0.32
VMP1-210ENST00000589823 LOXL2Q9Y4K0 774 aa13.07□□□□□ -0.32
VMP1-210ENST00000589823 A0A0J9YVX5 310 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 FEZF1A0PJY2 475 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 FAM149AA5PLN7 773 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 OR7A17O14581 309 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 NPHS1O60500 1241 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 UGDHO60701 494 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 CLDN9O95484 217 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 SERPINE1P05121 402 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 JMJD7P0C870 316 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 EBLN1P0CF75 366 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 FOLR1P15328 257 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 SERPINB5P36952 375 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 HNF4AP41235 474 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 CASP2P42575 452 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 WDR4P57081 412 aaKnown RBP13.06□□□□□ -0.32
VMP1-210ENST00000589823 RPS15AP62244 130 aaKnown RBP13.06□□□□□ -0.32
VMP1-210ENST00000589823 REEP5Q00765 189 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 MEF2AQ02078 507 aaPredicted RBP13.06□□□□□ -0.32
VMP1-210ENST00000589823 RELAQ04206 551 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 FOXM1Q08050 763 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 PCDH1Q08174 1060 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 FOXC1Q12948 553 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 LCP2Q13094 533 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 TUBB3Q13509 450 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 RBBP5Q15291 538 aaKnown RBP13.06□□□□□ -0.32
VMP1-210ENST00000589823 CHI3L2Q15782 390 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 LIPJQ5W064 366 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 GRHL2Q6ISB3 625 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 ZCCHC23Q6ZST2 131 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 RNF44Q7L0R7 432 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 TRIM42Q8IWZ5 723 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 DNAJC22Q8N4W6 341 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 WDR36Q8NI36 951 aaKnown RBP13.06□□□□□ -0.32
VMP1-210ENST00000589823 MDM1Q8TC05 714 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 DYDC1Q8WWB3 177 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 UBE2E3Q969T4 207 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 MOCOSQ96EN8 888 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 WDR34Q96EX3 536 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 CNDP1Q96KN2 507 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 TRMOQ9BU70 441 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 NTMT1Q9BV86 223 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 PITHD1Q9GZP4 211 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms