RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 PRKD3O94806 890 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 CATP04040 527 aaKnown RBP7.18□□□□□ -1.26
ZNF540-206ENST00000589117 HSD3B1P14060 373 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 JUPP14923 745 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 PPIBP23284 216 aaKnown RBP7.18□□□□□ -1.26
ZNF540-206ENST00000589117 VIPR1P32241 457 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 HNF4AP41235 474 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 ASMTP46597 345 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 SLC6A12P48065 614 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 RXRGP48443 463 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 NRIP1P48552 1158 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 CCR3P51677 355 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 IL18R1Q13478 541 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 SELPLGQ14242 412 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 GBX1Q14549 363 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 LDLRAP1Q5SW96 308 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 MRPL14Q6P1L8 145 aaKnown RBP7.18□□□□□ -1.26
ZNF540-206ENST00000589117 SUSD1Q6UWL2 747 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 DET1Q7L5Y6 550 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 SERPINA11Q86U17 422 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 ZSWIM9Q86XI8 627 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 TMC8Q8IU68 726 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 SYT12Q8IV01 421 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 KRTCAP2Q8N6L1 136 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 SETD9Q8NE22 299 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 HCAR2Q8TDS4 363 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 NELL1Q92832 810 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 TMIGD2Q96BF3 282 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 FBXL8Q96CD0 374 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 PANX1Q96RD7 426 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 SLC46A2Q9BY10 475 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 PAIP1Q9H074 479 aaKnown RBP7.18□□□□□ -1.26
ZNF540-206ENST00000589117 NTN4Q9HB63 628 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 FAM118AQ9NWS6 357 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 VPS29Q9UBQ0 182 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 B4GALT6Q9UBX8 382 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 USP22Q9UPT9 525 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 RUVBL1Q9Y265 456 aaKnown RBP7.18□□□□□ -1.26
ZNF540-206ENST00000589117 SLC22A14Q9Y267 594 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 ATP11BQ9Y2G3 1177 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 SNX5Q9Y5X3 404 aa7.18□□□□□ -1.26
ZNF540-206ENST00000589117 SLC9A3R1O14745 358 aaPredicted RBP7.17□□□□□ -1.26
ZNF540-206ENST00000589117 ATG13O75143 517 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 UGT2B11O75310 529 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 SLCO2B1O94956 709 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 EPN2O95208 641 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 CLIC3O95833 236 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 SERPINA1P01009 418 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 CCL5P13501 91 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 LHCGRP22888 699 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 DCKP27707 260 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 PNLIPRP1P54315 467 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 TMBIM6P55061 237 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 B4GALNT1Q00973 533 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 ACSM2AQ08AH3 577 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 HYAL2Q12891 473 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 CHIT1Q13231 466 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 PON2Q15165 354 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 DUOXA1Q1HG43 343 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 ZIK1Q3SY52 487 aaPredicted RBP7.17□□□□□ -1.26
ZNF540-206ENST00000589117 ZC3H12BQ5HYM0 836 aaKnown RBP7.17□□□□□ -1.26
ZNF540-206ENST00000589117 C10orf62Q5T681 223 aaPredicted RBP7.17□□□□□ -1.26
ZNF540-206ENST00000589117 ACSM2BQ68CK6 577 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 NOXRED1Q6NXP6 359 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 TBPL2Q6SJ96 375 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 MBOAT1Q6ZNC8 495 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 CALHM3Q86XJ0 350 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 TRAM1L1Q8N609 369 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 ARL10Q8N8L6 244 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 CLHC1Q8NHS4 586 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 IRF7Q92985 503 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 REPS1Q96D71 796 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 OTUB2Q96DC9 234 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 TSSK3Q96PN8 268 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 SPATA9Q9BWV2 254 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 ZBP1Q9H171 429 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 TOR3AQ9H497 397 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 BRF2Q9HAW0 419 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 PLGRKTQ9HBL7 147 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 TDP1Q9NUW8 608 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 FAM120CQ9NX05 1096 aaKnown RBP7.17□□□□□ -1.26
ZNF540-206ENST00000589117 SLC25A37Q9NYZ2 338 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 TBX21Q9UL17 535 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 CLEC4EQ9ULY5 219 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 AP1M2Q9Y6Q5 423 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 ZFC3H1O60293 1989 aaKnown RBP7.17□□□□□ -1.26
ZNF540-206ENST00000589117 TRBV5-3A0A0A0MS03 114 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 A0A1B0GTW7 788 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 FAM86C2PA6NEL3 165 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 UPK1AO00322 258 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 GSTM1P09488 218 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 CLTBP09497 229 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 CDK4P11802 303 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 JUNBP17275 347 aaPredicted RBP7.17□□□□□ -1.26
ZNF540-206ENST00000589117 PTPN2P17706 415 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 AMD1P17707 334 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 CD33P20138 364 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 PCSK6P29122 969 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 CA5AP35218 305 aa7.17□□□□□ -1.26
ZNF540-206ENST00000589117 GABARAPL2P60520 117 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms