RNA–Protein interactions for RNA: ENST00000588622.1

PDCD5-206, Transcript of programmed cell death 5, humanhuman

TSL 2

Gene PDCD5, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD5-206ENST00000588622 TAF1BQ53T94 588 aaPredicted RBP2.78□□□□□ -1.96
PDCD5-206ENST00000588622 SUSD4Q5VX71 490 aa2.78□□□□□ -1.96
PDCD5-206ENST00000588622 KRT39Q6A163 491 aa2.78□□□□□ -1.96
PDCD5-206ENST00000588622 ZNF343Q6P1L6 599 aa2.78□□□□□ -1.96
PDCD5-206ENST00000588622 PAQR6Q6TCH4 344 aa2.78□□□□□ -1.96
PDCD5-206ENST00000588622 KIF6Q6ZMV9 814 aa2.78□□□□□ -1.96
PDCD5-206ENST00000588622 PI4KAP1Q8N8J0 262 aa2.78□□□□□ -1.96
PDCD5-206ENST00000588622 RASGEF1AQ8N9B8 481 aa2.78□□□□□ -1.96
PDCD5-206ENST00000588622 AQP11Q8NBQ7 271 aa2.78□□□□□ -1.96
PDCD5-206ENST00000588622 NOA1Q8NC60 698 aaKnown RBP2.78□□□□□ -1.96
PDCD5-206ENST00000588622 PIK3R3Q92569 461 aa2.78□□□□□ -1.96
PDCD5-206ENST00000588622 PROX1Q92786 737 aa2.78□□□□□ -1.96
PDCD5-206ENST00000588622 SPSB1Q96BD6 273 aa2.78□□□□□ -1.96
PDCD5-206ENST00000588622 HDAC11Q96DB2 347 aa2.78□□□□□ -1.96
PDCD5-206ENST00000588622 CFAP57Q96MR6 1250 aa2.78□□□□□ -1.96
PDCD5-206ENST00000588622 PI4K2AQ9BTU6 479 aa2.78□□□□□ -1.96
PDCD5-206ENST00000588622 LRRC61Q9BV99 259 aa2.78□□□□□ -1.96
PDCD5-206ENST00000588622 FAM129AQ9BZQ8 928 aa2.78□□□□□ -1.96
PDCD5-206ENST00000588622 MED20Q9H944 212 aa2.78□□□□□ -1.96
PDCD5-206ENST00000588622 GSN-AS1Q9NRJ2 163 aa2.78□□□□□ -1.96
PDCD5-206ENST00000588622 NUDT4Q9NZJ9 180 aa2.78□□□□□ -1.96
PDCD5-206ENST00000588622 TBC1D7Q9P0N9 293 aa2.78□□□□□ -1.96
PDCD5-206ENST00000588622 KAT6BQ8WYB5 2073 aa2.78□□□□□ -1.96
PDCD5-206ENST00000588622 TP53BP1Q12888 1972 aaPredicted RBP2.78□□□□□ -1.97
PDCD5-206ENST00000588622 COL5A2P05997 1499 aaPredicted RBP2.77□□□□□ -1.97
PDCD5-206ENST00000588622 IGHV3OR16-10A0A075B7F0 116 aa2.77□□□□□ -1.97
PDCD5-206ENST00000588622 TRAV24A0A0B4J272 114 aa2.77□□□□□ -1.97
PDCD5-206ENST00000588622 IDH3BO43837 385 aa2.77□□□□□ -1.97
PDCD5-206ENST00000588622 SNX3O60493 162 aa2.77□□□□□ -1.97
PDCD5-206ENST00000588622 EEF1B2P24534 225 aaKnown RBP2.77□□□□□ -1.97
PDCD5-206ENST00000588622 SOX3P41225 446 aa2.77□□□□□ -1.97
PDCD5-206ENST00000588622 TSFMP43897 325 aaKnown RBP2.77□□□□□ -1.97
PDCD5-206ENST00000588622 IRX6P78412 446 aaPredicted RBP2.77□□□□□ -1.97
PDCD5-206ENST00000588622 CALD1Q05682 793 aaKnown RBP2.77□□□□□ -1.97
PDCD5-206ENST00000588622 ELAVL2Q12926 359 aaKnown RBP2.77□□□□□ -1.97
PDCD5-206ENST00000588622 TRA2AQ13595 282 aaKnown RBP eCLIP2.77□□□□□ -1.97
PDCD5-206ENST00000588622 CDH18Q13634 790 aa2.77□□□□□ -1.97
PDCD5-206ENST00000588622 TRIM29Q14134 588 aa2.77□□□□□ -1.97
PDCD5-206ENST00000588622 TAB1Q15750 504 aa2.77□□□□□ -1.97
PDCD5-206ENST00000588622 KYNUQ16719 465 aa2.77□□□□□ -1.97
PDCD5-206ENST00000588622 MOGAT2Q3SYC2 334 aa2.77□□□□□ -1.97
PDCD5-206ENST00000588622 TCTEX1D4Q5JR98 221 aa2.77□□□□□ -1.97
PDCD5-206ENST00000588622 FRRS1Q6ZNA5 592 aa2.77□□□□□ -1.97
PDCD5-206ENST00000588622 TLK2Q86UE8 772 aa2.77□□□□□ -1.97
PDCD5-206ENST00000588622 LYG1Q8N1E2 194 aa2.77□□□□□ -1.97
PDCD5-206ENST00000588622 NUP37Q8NFH4 326 aa2.77□□□□□ -1.97
PDCD5-206ENST00000588622 KCNE4Q8WWG9 221 aa2.77□□□□□ -1.97
PDCD5-206ENST00000588622 C2orf48Q96LS8 159 aa2.77□□□□□ -1.97
PDCD5-206ENST00000588622 PRICKLE1Q96MT3 831 aaPredicted RBP2.77□□□□□ -1.97
PDCD5-206ENST00000588622 GPATCH1Q9BRR8 931 aaKnown RBP2.77□□□□□ -1.97
PDCD5-206ENST00000588622 BCCIPQ9P287 314 aaKnown RBP eCLIP2.77□□□□□ -1.97
PDCD5-206ENST00000588622 TXNDC16Q9P2K2 825 aa2.77□□□□□ -1.97
PDCD5-206ENST00000588622 SMAD5-AS1Q9Y6J3 95 aa2.77□□□□□ -1.97
PDCD5-206ENST00000588622 A0A1W2PPR1 153 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 MTMR11A4FU01 709 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 G3V2L1 256 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 RPS6KA5O75582 802 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 CEACAM4O75871 244 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 FYNP06241 537 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 SELEP16581 610 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 BDNFP23560 247 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 SHC1P29353 583 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 RBMS1P29558 406 aaKnown RBP2.76□□□□□ -1.97
PDCD5-206ENST00000588622 TLX1P31314 330 aaPredicted RBP2.76□□□□□ -1.97
PDCD5-206ENST00000588622 OR3A2P47893 321 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 TMEM50BP56557 158 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 DLK1P80370 383 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 PRPF4BQ13523 1007 aaKnown RBP2.76□□□□□ -1.97
PDCD5-206ENST00000588622 TMEM132DQ14C87 1099 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 NONOQ15233 471 aaKnown RBP eCLIP2.76□□□□□ -1.97
PDCD5-206ENST00000588622 PTPN14Q15678 1187 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 MFSD4BQ5TF39 518 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 CST9LP1Q5W188 147 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 CES4AQ5XG92 561 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 OR4C11Q6IEV9 310 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 RPUSD3Q6P087 351 aaKnown RBP2.76□□□□□ -1.97
PDCD5-206ENST00000588622 CLEC4GQ6UXB4 293 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 GPRIN3Q6ZVF9 776 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 FCRLAQ7L513 359 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 KRT74Q7RTS7 529 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 RYBPQ8N488 228 aaPredicted RBP2.76□□□□□ -1.97
PDCD5-206ENST00000588622 FAM89BQ8N5H3 189 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 LRTM2Q8N967 370 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 Q8NBF4 154 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 SPATA33Q96N06 139 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 KLHL5Q96PQ7 755 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 OVOL2Q9BRP0 275 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 DCTN5Q9BTE1 182 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 TDRD1Q9BXT4 1180 aaKnown RBP2.76□□□□□ -1.97
PDCD5-206ENST00000588622 TXLNGYQ9BZA5 131 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 NYXQ9GZU5 481 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 HOXD1Q9GZZ0 328 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 FZD8Q9H461 694 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 RPS10P5Q9NQ39 176 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 TEX10Q9NXF1 929 aaPredicted RBP2.76□□□□□ -1.97
PDCD5-206ENST00000588622 NDE1Q9NXR1 346 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 NKIRAS2Q9NYR9 191 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 PRDM4Q9UKN5 801 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 MOB4Q9Y3A3 225 aa2.76□□□□□ -1.97
PDCD5-206ENST00000588622 ARID2Q68CP9 1835 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms