RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 GMPRP36959 345 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 GDF5P43026 501 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 ARSFP54793 590 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 ITGA1P56199 1179 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 CLDN6P56747 220 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 DNAJB13P59910 316 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 HERVK_113P63132 956 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 ZXDCQ2QGD7 858 aaPredicted RBP8.7□□□□□ -1.02
CIRBP-218ENST00000588344 FAM214AQ32MH5 1076 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 C3orf38Q5JPI3 329 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 C10orf62Q5T681 223 aaPredicted RBP8.7□□□□□ -1.02
CIRBP-218ENST00000588344 AGBL2Q5U5Z8 902 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 LIPJQ5W064 366 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 FCRL6Q6DN72 434 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 C16orf46Q6P387 395 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 FOXR1Q6PIV2 292 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 ZYG11AQ6WRX3 759 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 CDHR3Q6ZTQ4 885 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 RNF44Q7L0R7 432 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 ADCK2Q7Z695 626 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 TRIM73Q86UV7 250 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 PAQR7Q86WK9 346 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 PTGR2Q8N8N7 351 aaPredicted RBP8.7□□□□□ -1.02
CIRBP-218ENST00000588344 SNX31Q8N9S9 440 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 CCDC63Q8NA47 563 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 TRPV3Q8NET8 790 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 PPP4R1Q8TF05 950 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 NEIL2Q969S2 332 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 ZNF501Q96CX3 271 aaPredicted RBP8.7□□□□□ -1.02
CIRBP-218ENST00000588344 PHF21BQ96EK2 531 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 WDR34Q96EX3 536 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 PTCD3Q96EY7 689 aaKnown RBP8.7□□□□□ -1.02
CIRBP-218ENST00000588344 PRR11Q96HE9 360 aaPredicted RBP8.7□□□□□ -1.02
CIRBP-218ENST00000588344 PPM1MQ96MI6 270 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 PRAP1Q96NZ9 151 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 SELENOSQ9BQE4 189 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 TMEM79Q9BSE2 394 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 ERVK-6Q9BXR3 956 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 FAM117AQ9C073 453 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 TMBIM4Q9HC24 238 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 FAM60AQ9NP50 221 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 ABCF3Q9NUQ8 709 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 OCIAD1Q9NX40 245 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 PISDQ9UG56 409 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 ADGRE2Q9UHX3 823 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 PILRAQ9UKJ1 303 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 ACSL6Q9UKU0 697 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 IGKV1-8A0A0C4DH67 115 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 TRBC2A0A5B9 178 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 A8MT66 165 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 CDRT15L2A8MXV6 281 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 E2F3O00716 465 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 ZSCAN9O15535 394 aaPredicted RBP8.69□□□□□ -1.02
CIRBP-218ENST00000588344 TYROBPO43914 113 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 DLX3O60479 287 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 OR2B3O76000 313 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 WFS1O76024 890 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 TOP3BO95985 862 aaKnown RBP8.69□□□□□ -1.02
CIRBP-218ENST00000588344 OTCP00480 354 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 EBLN1P0CF75 366 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 CDH1P12830 882 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 EEF1DP29692 281 aaKnown RBP8.69□□□□□ -1.02
CIRBP-218ENST00000588344 AHRP35869 848 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 HNF4AP41235 474 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 MAPK10P53779 464 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 SH3BP2P78314 561 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 CSNK1G2P78368 415 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 IRF8Q02556 426 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 PWP1Q13610 501 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 GTF2H2Q13888 395 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 E2F2Q14209 437 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 MAP7Q14244 749 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 KCNAB1Q14722 419 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 GRM7Q14831 915 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 ZIC1Q15915 447 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 GARNL3Q5VVW2 1013 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 LIPMQ5VYY2 423 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 NIPAL1Q6NVV3 410 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 GTF2H2CQ6P1K8 395 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 SLCO4C1Q6ZQN7 724 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 FAM20CQ8IXL6 584 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 TEX9Q8N6V9 391 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 CAMKVQ8NCB2 501 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 TCP10LQ8TDR4 215 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 USP7Q93009 1102 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 ATP6V1E2Q96A05 226 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 REPS1Q96D71 796 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 L3HYPDHQ96EM0 354 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 LRFN5Q96NI6 719 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 ZNF285Q96NJ3 590 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 OR2A5Q96R48 311 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 DPH2Q9BQC3 489 aaPredicted RBP8.69□□□□□ -1.02
CIRBP-218ENST00000588344 EFCAB11Q9BUY7 163 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 NTMT1Q9BV86 223 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 SLC7A5P2Q9GIP4 190 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 KLHL25Q9H0H3 589 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 IPPKQ9H8X2 491 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 SLC6A20Q9NP91 592 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 OXSMQ9NWU1 459 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 COPG2Q9UBF2 871 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms