RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 SNX6Q9UNH7 406 aa5.59□□□□□ -1.51
SDF2-206ENST00000587788 MAPRE3Q9UPY8 281 aa5.59□□□□□ -1.51
SDF2-206ENST00000587788 BTRCQ9Y297 605 aa5.59□□□□□ -1.51
SDF2-206ENST00000587788 SIT1Q9Y3P8 196 aa5.59□□□□□ -1.51
SDF2-206ENST00000587788 TIMM22Q9Y584 194 aa5.59□□□□□ -1.51
SDF2-206ENST00000587788 PCDHB14Q9Y5E9 798 aa5.59□□□□□ -1.51
SDF2-206ENST00000587788 AP4B1Q9Y6B7 739 aa5.59□□□□□ -1.51
SDF2-206ENST00000587788 COMMD3-BMI1R4GMX3 469 aa5.59□□□□□ -1.51
SDF2-206ENST00000587788 ARHGAP10A1A4S6 786 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 NPIPB8E9PQR5 432 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 FAM229AH3BQW9 127 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 OR7A17O14581 309 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 LSM1O15116 133 aaKnown RBP5.58□□□□□ -1.52
SDF2-206ENST00000587788 ARPC2O15144 300 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 AKAP10O43572 662 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 NUAK1O60285 661 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 UGDHO60701 494 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 KCNH1O95259 989 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 HTR3BO95264 441 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 CLDN7O95471 211 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 EGFP01133 1207 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 FTH1P02794 183 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 ALPIP09923 528 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 PRPS2P11908 318 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 XPAP23025 273 aaPredicted RBP5.58□□□□□ -1.52
SDF2-206ENST00000587788 MSX2P35548 267 aaPredicted RBP5.58□□□□□ -1.52
SDF2-206ENST00000587788 ARL1P40616 181 aaPredicted RBP5.58□□□□□ -1.52
SDF2-206ENST00000587788 OPRD1P41143 372 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 GNPDA1P46926 289 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 GSK3BP49841 420 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 CCNHP51946 323 aaPredicted RBP5.58□□□□□ -1.52
SDF2-206ENST00000587788 NR1H2P55055 460 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 DIO3P55073 304 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 UFM1P61960 85 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 TUBA4AP68366 448 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 MRPS21P82921 87 aaKnown RBP5.58□□□□□ -1.52
SDF2-206ENST00000587788 ID3Q02535 119 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 LIPEQ05469 1076 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 ELP6Q0PNE2 266 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 GRSF1Q12849 480 aaKnown RBP eCLIP5.58□□□□□ -1.52
SDF2-206ENST00000587788 RALGDSQ12967 914 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 TRAF3Q13114 568 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 MTAPQ13126 283 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 ENPP2Q13822 863 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 ARHGEF7Q14155 803 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 ELAVL3Q14576 367 aaKnown RBP5.58□□□□□ -1.52
SDF2-206ENST00000587788 ANGPT1Q15389 498 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 CHRNA6Q15825 494 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 AP5B1Q2VPB7 878 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 GGTA1PQ4G0N0 100 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 TMEM196Q5HYL7 178 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 TMEM201Q5SNT2 666 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 C9orf64Q5T6V5 341 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 ERAP2Q6P179 960 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 LETMD1Q6P1Q0 360 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 C22orf39Q6P5X5 142 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 BORAQ6PGQ7 559 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 SLC30A9Q6PML9 568 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 TSSK4Q6SA08 328 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 CYP20A1Q6UW02 462 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 SERPINA13PQ6UXR4 307 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 ZNF852Q6ZMS4 543 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 Q6ZSR9 355 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 LSRQ86X29 649 aaPredicted RBP5.58□□□□□ -1.52
SDF2-206ENST00000587788 NRSN1Q8IZ57 195 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 GALNT15Q8N3T1 639 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 SYNPOQ8N3V7 929 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 SFRP1Q8N474 314 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 TERB1Q8NA31 727 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 ZSCAN1Q8NBB4 408 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 OR4F6Q8NGB9 312 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 OR52E4Q8NGH9 312 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 HM13Q8TCT9 377 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 PROKR1Q8TCW9 393 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 MCOLN3Q8TDD5 553 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 ATL1Q8WXF7 558 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 LRTOMTQ8WZ04 291 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 OR8D1Q8WZ84 308 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 NCSTNQ92542 709 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 SLCO4A1Q96BD0 722 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 RHBDF1Q96CC6 855 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 EID2BQ96D98 161 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 PPP1R16AQ96I34 528 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 CCDC115Q96NT0 180 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 FERD3LQ96RJ6 166 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 ACOX2Q99424 681 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 BDH2Q9BUT1 245 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 SPATA16Q9BXB7 569 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 UGT2B28Q9BY64 529 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 YTHDF1Q9BYJ9 559 aaKnown RBP5.58□□□□□ -1.52
SDF2-206ENST00000587788 YIPF3Q9GZM5 350 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 TNKS2Q9H2K2 1166 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 TMEM245Q9H330 911 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 SLC32A1Q9H598 525 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 COQ10BQ9H8M1 238 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 PARVBQ9HBI1 364 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 DYRK4Q9NR20 520 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 PAPOLBQ9NRJ5 636 aaKnown RBP5.58□□□□□ -1.52
SDF2-206ENST00000587788 AGPAT4Q9NRZ5 378 aa5.58□□□□□ -1.52
SDF2-206ENST00000587788 PNPLA3Q9NST1 481 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms