RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 TACC2O95359 2948 aa11.25□□□□□ -0.61
BRCA1-225ENST00000586385 GOLGA6L9A6NEM1 432 aa11.25□□□□□ -0.61
BRCA1-225ENST00000586385 OR2W5A6NFC9 320 aa11.25□□□□□ -0.61
BRCA1-225ENST00000586385 MYO1CO00159 1063 aa11.25□□□□□ -0.61
BRCA1-225ENST00000586385 LIASO43766 372 aa11.25□□□□□ -0.61
BRCA1-225ENST00000586385 NIPSNAP2O75323 286 aa11.25□□□□□ -0.61
BRCA1-225ENST00000586385 FTCDO95954 541 aa11.25□□□□□ -0.61
BRCA1-225ENST00000586385 STATHP02808 62 aa11.25□□□□□ -0.61
BRCA1-225ENST00000586385 ERVK-10P10266 1014 aa11.25□□□□□ -0.61
BRCA1-225ENST00000586385 CXCR2P25025 360 aa11.25□□□□□ -0.61
BRCA1-225ENST00000586385 NMBRP28336 390 aa11.25□□□□□ -0.61
BRCA1-225ENST00000586385 CMPK1P30085 196 aa11.25□□□□□ -0.61
BRCA1-225ENST00000586385 CYLC1P35663 651 aaPredicted RBP11.25□□□□□ -0.61
BRCA1-225ENST00000586385 FDFT1P37268 417 aa11.25□□□□□ -0.61
BRCA1-225ENST00000586385 CETN2P41208 172 aa11.25□□□□□ -0.61
BRCA1-225ENST00000586385 TTPAP49638 278 aa11.25□□□□□ -0.61
BRCA1-225ENST00000586385 EIF3BP55884 814 aaKnown RBP11.25□□□□□ -0.61
BRCA1-225ENST00000586385 AARS2Q5JTZ9 985 aaKnown RBP11.25□□□□□ -0.61
BRCA1-225ENST00000586385 FCRLBQ6BAA4 426 aa11.25□□□□□ -0.61
BRCA1-225ENST00000586385 H3F3CQ6NXT2 135 aa11.25□□□□□ -0.61
BRCA1-225ENST00000586385 TTC23LQ6PF05 361 aa11.25□□□□□ -0.61
BRCA1-225ENST00000586385 XKRXQ6PP77 449 aa11.25□□□□□ -0.61
BRCA1-225ENST00000586385 Q6ZPB1 254 aaPredicted RBP11.25□□□□□ -0.61
BRCA1-225ENST00000586385 LANCL3Q6ZV70 420 aa11.25□□□□□ -0.61
BRCA1-225ENST00000586385 OTOAQ7RTW8 1153 aa11.25□□□□□ -0.61
BRCA1-225ENST00000586385 PRSS41Q7RTY9 318 aa11.25□□□□□ -0.61
BRCA1-225ENST00000586385 PLD3Q8IV08 490 aa11.25□□□□□ -0.61
BRCA1-225ENST00000586385 BEST3Q8N1M1 668 aa11.25□□□□□ -0.61
BRCA1-225ENST00000586385 MDS2Q8NDY4 140 aa11.25□□□□□ -0.61
BRCA1-225ENST00000586385 OR9A1PQ8NGU1 263 aa11.25□□□□□ -0.61
BRCA1-225ENST00000586385 SKA2Q8WVK7 121 aaPredicted RBP11.25□□□□□ -0.61
BRCA1-225ENST00000586385 LPGAT1Q92604 370 aa11.25□□□□□ -0.61
BRCA1-225ENST00000586385 FAM136AQ96C01 138 aa11.25□□□□□ -0.61
BRCA1-225ENST00000586385 CALR3Q96L12 384 aaKnown RBP11.25□□□□□ -0.61
BRCA1-225ENST00000586385 SIGLEC12Q96PQ1 595 aa11.25□□□□□ -0.61
BRCA1-225ENST00000586385 PANX3Q96QZ0 392 aa11.25□□□□□ -0.61
BRCA1-225ENST00000586385 YIPF2Q9BWQ6 316 aa11.25□□□□□ -0.61
BRCA1-225ENST00000586385 MRPS30Q9NP92 439 aaKnown RBP11.25□□□□□ -0.61
BRCA1-225ENST00000586385 STMN3Q9NZ72 180 aa11.25□□□□□ -0.61
BRCA1-225ENST00000586385 GNPTGQ9UJJ9 305 aa11.25□□□□□ -0.61
BRCA1-225ENST00000586385 ITGB1BP2Q9UKP3 347 aa11.25□□□□□ -0.61
BRCA1-225ENST00000586385 MKL2Q9ULH7 1088 aa11.25□□□□□ -0.61
BRCA1-225ENST00000586385 CDC14AQ9UNH5 594 aa11.25□□□□□ -0.61
BRCA1-225ENST00000586385 HAT1O14929 419 aa11.24□□□□□ -0.61
BRCA1-225ENST00000586385 SEC24DO94855 1032 aaPredicted RBP11.24□□□□□ -0.61
BRCA1-225ENST00000586385 IFNB1P01574 187 aa11.24□□□□□ -0.61
BRCA1-225ENST00000586385 ZSCAN5DPP0CG00 497 aa11.24□□□□□ -0.61
BRCA1-225ENST00000586385 AGAP20933 346 aa11.24□□□□□ -0.61
BRCA1-225ENST00000586385 CCNFP41002 786 aa11.24□□□□□ -0.61
BRCA1-225ENST00000586385 NAP1L1P55209 391 aaKnown RBP11.24□□□□□ -0.61
BRCA1-225ENST00000586385 ZNF33BQ06732 778 aa11.24□□□□□ -0.61
BRCA1-225ENST00000586385 KCTD19Q17RG1 926 aaPredicted RBP11.24□□□□□ -0.61
BRCA1-225ENST00000586385 ACSBG2Q5FVE4 666 aa11.24□□□□□ -0.61
BRCA1-225ENST00000586385 ZNF766Q5HY98 468 aa11.24□□□□□ -0.61
BRCA1-225ENST00000586385 ABHD17BQ5VST6 288 aa11.24□□□□□ -0.61
BRCA1-225ENST00000586385 GARNL3Q5VVW2 1013 aa11.24□□□□□ -0.61
BRCA1-225ENST00000586385 MTFR2Q6P444 385 aa11.24□□□□□ -0.61
BRCA1-225ENST00000586385 FGD2Q7Z6J4 655 aa11.24□□□□□ -0.61
BRCA1-225ENST00000586385 SIAH3Q8IW03 269 aa11.24□□□□□ -0.61
BRCA1-225ENST00000586385 LRRC56Q8IYG6 542 aaPredicted RBP11.24□□□□□ -0.61
BRCA1-225ENST00000586385 PPFIBP2Q8ND30 876 aa11.24□□□□□ -0.61
BRCA1-225ENST00000586385 THAP3Q8WTV1 239 aaPredicted RBP11.24□□□□□ -0.61
BRCA1-225ENST00000586385 SMPDL3AQ92484 453 aa11.24□□□□□ -0.61
BRCA1-225ENST00000586385 HES6Q96HZ4 224 aa11.24□□□□□ -0.61
BRCA1-225ENST00000586385 GPR137Q96N19 417 aa11.24□□□□□ -0.61
BRCA1-225ENST00000586385 PKP4Q99569 1192 aa11.24□□□□□ -0.61
BRCA1-225ENST00000586385 SLC30A3Q99726 388 aa11.24□□□□□ -0.61
BRCA1-225ENST00000586385 TUBB6Q9BUF5 446 aa11.24□□□□□ -0.61
BRCA1-225ENST00000586385 DRC3Q9H069 523 aa11.24□□□□□ -0.61
BRCA1-225ENST00000586385 TSPAN10Q9H1Z9 355 aaPredicted RBP11.24□□□□□ -0.61
BRCA1-225ENST00000586385 TSPY26PQ9H489 355 aa11.24□□□□□ -0.61
BRCA1-225ENST00000586385 RAB6BQ9NRW1 208 aa11.24□□□□□ -0.61
BRCA1-225ENST00000586385 IGSF5Q9NSI5 407 aa11.24□□□□□ -0.61
BRCA1-225ENST00000586385 TAC3Q9UHF0 121 aa11.24□□□□□ -0.61
BRCA1-225ENST00000586385 PCYOX1Q9UHG3 505 aa11.24□□□□□ -0.61
BRCA1-225ENST00000586385 AMFRQ9UKV5 643 aa11.24□□□□□ -0.61
BRCA1-225ENST00000586385 NF1P21359 2839 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 ASPDHA6ND91 283 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 E7ENX8 843 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 ADAM10O14672 748 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 PRPF4O43172 522 aaKnown RBP eCLIP11.23□□□□□ -0.615e-17■■■■■ 29.7
BRCA1-225ENST00000586385 PHF2O75151 1096 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 PSIP1O75475 530 aaKnown RBP11.23□□□□□ -0.61
BRCA1-225ENST00000586385 GAS8O95995 478 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 APRTP07741 180 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 F7P08709 466 aaPredicted RBP11.23□□□□□ -0.61
BRCA1-225ENST00000586385 C8orf89P0DMQ9 161 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 ATP5DP30049 168 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 FMO4P31512 558 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 STIP1P31948 543 aaKnown RBP11.23□□□□□ -0.61
BRCA1-225ENST00000586385 RPL22P35268 128 aaKnown RBP11.23□□□□□ -0.61
BRCA1-225ENST00000586385 PPARGP37231 505 aaPredicted RBP11.23□□□□□ -0.61
BRCA1-225ENST00000586385 CD96P40200 585 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 SESN2P58004 480 aaPredicted RBP11.23□□□□□ -0.61
BRCA1-225ENST00000586385 TAP2Q03519 686 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 PRDX1Q06830 199 aaKnown RBP11.23□□□□□ -0.61
BRCA1-225ENST00000586385 TUBA3CQ13748 450 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 FAM53BQ14153 422 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 KCNJ11Q14654 390 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 TYSND1Q2T9J0 566 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms