RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-229ENST00000584754 OXNAD1Q96HP4 312 aaPredicted RBP3.42□□□□□ -1.86
PPP4R1-229ENST00000584754 CCDC114Q96M63 670 aa3.42□□□□□ -1.86
PPP4R1-229ENST00000584754 ZNF558Q96NG5 402 aa3.42□□□□□ -1.86
PPP4R1-229ENST00000584754 PKP4Q99569 1192 aa3.42□□□□□ -1.86
PPP4R1-229ENST00000584754 FEVQ99581 238 aa3.42□□□□□ -1.86
PPP4R1-229ENST00000584754 RSPH9Q9H1X1 276 aaPredicted RBP3.42□□□□□ -1.86
PPP4R1-229ENST00000584754 EVA1AQ9H8M9 152 aa3.42□□□□□ -1.86
PPP4R1-229ENST00000584754 LRRC4Q9HBW1 653 aa3.42□□□□□ -1.86
PPP4R1-229ENST00000584754 APOBEC3GQ9HC16 384 aaKnown RBP3.42□□□□□ -1.86
PPP4R1-229ENST00000584754 ZBTB20Q9HC78 741 aaPredicted RBP3.42□□□□□ -1.86
PPP4R1-229ENST00000584754 GKN1Q9NS71 199 aa3.42□□□□□ -1.86
PPP4R1-229ENST00000584754 ECHDC1Q9NTX5 307 aa3.42□□□□□ -1.86
PPP4R1-229ENST00000584754 DONSONQ9NYP3 566 aa3.42□□□□□ -1.86
PPP4R1-229ENST00000584754 ERAP1Q9NZ08 941 aa3.42□□□□□ -1.86
PPP4R1-229ENST00000584754 TXNDC16Q9P2K2 825 aa3.42□□□□□ -1.86
PPP4R1-229ENST00000584754 RHCGQ9UBD6 479 aa3.42□□□□□ -1.86
PPP4R1-229ENST00000584754 TRIM17Q9Y577 477 aa3.42□□□□□ -1.86
PPP4R1-229ENST00000584754 SPIN1Q9Y657 262 aaPredicted RBP3.42□□□□□ -1.86
PPP4R1-229ENST00000584754 SIPA1L3O60292 1781 aaPredicted RBP3.42□□□□□ -1.86
PPP4R1-229ENST00000584754 IGLV5-45A0A087WSX0 123 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 HYKKA2RU49 373 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 TMEM221A6NGB7 291 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 OOEPA6NGQ2 149 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 TRIM77I1YAP6 450 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 PTGESO14684 152 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 PENKP01210 267 aaPredicted RBP3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 IGHV4-39P01824 125 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 LIPFP07098 398 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 CETPP11597 493 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 AMD1P17707 334 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 PTPN3P26045 913 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 TNNT2P45379 298 aaPredicted RBP3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 LHX1P48742 406 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 BRWD1-AS2P59051 145 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 DLK1P80370 383 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 ZBTB17Q13105 803 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 PTK6Q13882 451 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 ZRSR1Q15695 479 aaKnown RBP3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 FUT11Q495W5 492 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 GRTP1Q5TC63 336 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 FAM171BQ6P995 826 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 GDPD4Q6W3E5 623 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 PPP1R21Q6ZMI0 780 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 USP50Q70EL3 339 aaPredicted RBP3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 ABI3BPQ7Z7G0 1075 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 ODF3L1Q8IXM7 274 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 ZNF595Q8IYB9 648 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 HMGCLL1Q8TB92 370 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 RNF128Q8TEB7 428 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 SYN2Q92777 582 aaPredicted RBP3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 JAKMIP1Q96N16 626 aaKnown RBP3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 MUS81Q96NY9 551 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 MYADMQ96S97 322 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 DNAI2Q9GZS0 605 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 SLA2Q9H6Q3 261 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 COPS7BQ9H9Q2 264 aaPredicted RBP3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 CDH20Q9HBT6 801 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 XAB2Q9HCS7 855 aaKnown RBP3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 SLC38A7Q9NVC3 462 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 KLHL9Q9P2J3 617 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 CDH7Q9ULB5 785 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 KCNS2Q9ULS6 477 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 SLC7A7Q9UM01 511 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 POMT1Q9Y6A1 747 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 ZFP37Q9Y6Q3 630 aaPredicted RBP3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 NUP98P52948 1817 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 DMDP11532 3685 aa3.41□□□□□ -1.86
PPP4R1-229ENST00000584754 XIRP2A4UGR9 3374 aa3.4□□□□□ -1.86
PPP4R1-229ENST00000584754 ZNF587BE7ETH6 402 aa3.4□□□□□ -1.87
PPP4R1-229ENST00000584754 O00370 1275 aa3.4□□□□□ -1.87
PPP4R1-229ENST00000584754 ATP1A1P05023 1023 aaKnown RBP3.4□□□□□ -1.87
PPP4R1-229ENST00000584754 KRT19P08727 400 aa3.4□□□□□ -1.87
PPP4R1-229ENST00000584754 OR52Z1P0C646 297 aa3.4□□□□□ -1.87
PPP4R1-229ENST00000584754 PLA2G4BP0C869 781 aa3.4□□□□□ -1.87
PPP4R1-229ENST00000584754 FGF5P12034 268 aa3.4□□□□□ -1.87
PPP4R1-229ENST00000584754 IRF2P14316 349 aa3.4□□□□□ -1.87
PPP4R1-229ENST00000584754 GLULP15104 373 aa3.4□□□□□ -1.87
PPP4R1-229ENST00000584754 PDGFRAP16234 1089 aa3.4□□□□□ -1.87
PPP4R1-229ENST00000584754 EPCAMP16422 314 aa3.4□□□□□ -1.87
PPP4R1-229ENST00000584754 ITGA2P17301 1181 aa3.4□□□□□ -1.87
PPP4R1-229ENST00000584754 CKMT2P17540 419 aa3.4□□□□□ -1.87
PPP4R1-229ENST00000584754 MUTP22033 750 aa3.4□□□□□ -1.87
PPP4R1-229ENST00000584754 ACAT1P24752 427 aaKnown RBP3.4□□□□□ -1.87
PPP4R1-229ENST00000584754 TNNT3P45378 269 aaPredicted RBP3.4□□□□□ -1.87
PPP4R1-229ENST00000584754 FMO5P49326 533 aa3.4□□□□□ -1.87
PPP4R1-229ENST00000584754 HUNKP57058 714 aa3.4□□□□□ -1.87
PPP4R1-229ENST00000584754 ISL1P61371 349 aa3.4□□□□□ -1.87
PPP4R1-229ENST00000584754 HERV-K104P61576 105 aa3.4□□□□□ -1.87
PPP4R1-229ENST00000584754 DMP1Q13316 513 aaPredicted RBP3.4□□□□□ -1.87
PPP4R1-229ENST00000584754 ITGA7Q13683 1181 aa3.4□□□□□ -1.87
PPP4R1-229ENST00000584754 MORF4L2Q15014 288 aa3.4□□□□□ -1.87
PPP4R1-229ENST00000584754 PDLIM3Q53GG5 364 aaPredicted RBP3.4□□□□□ -1.87
PPP4R1-229ENST00000584754 FAM91A1Q658Y4 838 aa3.4□□□□□ -1.87
PPP4R1-229ENST00000584754 NOTUMQ6P988 496 aa3.4□□□□□ -1.87
PPP4R1-229ENST00000584754 PLXDC2Q6UX71 529 aa3.4□□□□□ -1.87
PPP4R1-229ENST00000584754 ZNF771Q7L3S4 317 aaPredicted RBP3.4□□□□□ -1.87
PPP4R1-229ENST00000584754 SPATA19Q7Z5L4 167 aa3.4□□□□□ -1.87
PPP4R1-229ENST00000584754 CCDC91Q7Z6B0 441 aa3.4□□□□□ -1.87
PPP4R1-229ENST00000584754 ZNF554Q86TJ5 538 aa3.4□□□□□ -1.87
PPP4R1-229ENST00000584754 UNC45BQ8IWX7 931 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms