RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 PLCD4Q9BRC7 762 aa17.6■□□□□ 0.41
RFFL-211ENST00000584541 THAP1Q9NVV9 213 aa17.6■□□□□ 0.41
RFFL-211ENST00000584541 SOHLH2Q9NX45 425 aa17.6■□□□□ 0.41
RFFL-211ENST00000584541 KLK4Q9Y5K2 254 aa17.6■□□□□ 0.41
RFFL-211ENST00000584541 IGHV5-10-1A0A0J9YXX1 117 aa17.59■□□□□ 0.41
RFFL-211ENST00000584541 SPAARA0A1B0GVQ0 90 aa17.59■□□□□ 0.41
RFFL-211ENST00000584541 HGSO14964 777 aaPredicted RBP17.59■□□□□ 0.41
RFFL-211ENST00000584541 CASC3O15234 703 aaKnown RBP17.59■□□□□ 0.41
RFFL-211ENST00000584541 POLR3GO15318 223 aaPredicted RBP17.59■□□□□ 0.41
RFFL-211ENST00000584541 KIF1CO43896 1103 aaKnown RBP17.59■□□□□ 0.41
RFFL-211ENST00000584541 ESRRBO95718 433 aa17.59■□□□□ 0.41
RFFL-211ENST00000584541 ENO1P06733 434 aaKnown RBP17.59■□□□□ 0.41
RFFL-211ENST00000584541 HGFP14210 728 aa17.59■□□□□ 0.41
RFFL-211ENST00000584541 PVRP15151 417 aa17.59■□□□□ 0.41
RFFL-211ENST00000584541 ST6GAL1P15907 406 aa17.59■□□□□ 0.41
RFFL-211ENST00000584541 VARSP26640 1264 aaKnown RBP17.59■□□□□ 0.41
RFFL-211ENST00000584541 LSSP48449 732 aa17.59■□□□□ 0.41
RFFL-211ENST00000584541 CSNK1G2P78368 415 aa17.59■□□□□ 0.41
RFFL-211ENST00000584541 SIM1P81133 766 aaPredicted RBP17.59■□□□□ 0.41
RFFL-211ENST00000584541 GUCY1A3Q02108 690 aa17.59■□□□□ 0.41
RFFL-211ENST00000584541 TRAF3Q13114 568 aa17.59■□□□□ 0.41
RFFL-211ENST00000584541 TRA2AQ13595 282 aaKnown RBP eCLIP17.59■□□□□ 0.41
RFFL-211ENST00000584541 RSPO4Q2I0M5 234 aaPredicted RBP17.59■□□□□ 0.41
RFFL-211ENST00000584541 PHF19Q5T6S3 580 aa17.59■□□□□ 0.41
RFFL-211ENST00000584541 GRHL2Q6ISB3 625 aa17.59■□□□□ 0.41
RFFL-211ENST00000584541 ZNF425Q6IV72 752 aa17.59■□□□□ 0.41
RFFL-211ENST00000584541 KIRREL3Q8IZU9 778 aa17.59■□□□□ 0.41
RFFL-211ENST00000584541 L3MBTL4Q8NA19 623 aa17.59■□□□□ 0.41
RFFL-211ENST00000584541 OR4F6Q8NGB9 312 aa17.59■□□□□ 0.41
RFFL-211ENST00000584541 OR4K1Q8NGD4 311 aa17.59■□□□□ 0.41
RFFL-211ENST00000584541 AGAP11Q8TF27 550 aa17.59■□□□□ 0.41
RFFL-211ENST00000584541 UBE2E3Q969T4 207 aa17.59■□□□□ 0.41
RFFL-211ENST00000584541 TCTN2Q96GX1 697 aa17.59■□□□□ 0.41
RFFL-211ENST00000584541 CDK15Q96Q40 435 aa17.59■□□□□ 0.41
RFFL-211ENST00000584541 RTKNQ9BST9 563 aa17.59■□□□□ 0.41
RFFL-211ENST00000584541 PITHD1Q9GZP4 211 aaPredicted RBP17.59■□□□□ 0.41
RFFL-211ENST00000584541 KLHL25Q9H0H3 589 aa17.59■□□□□ 0.41
RFFL-211ENST00000584541 PRM3Q9NNZ6 103 aa17.59■□□□□ 0.41
RFFL-211ENST00000584541 PDE7BQ9NP56 450 aa17.59■□□□□ 0.41
RFFL-211ENST00000584541 TOR4AQ9NXH8 423 aa17.59■□□□□ 0.41
RFFL-211ENST00000584541 PDP2Q9P2J9 529 aa17.59■□□□□ 0.41
RFFL-211ENST00000584541 TRPS1Q9UHF7 1281 aa17.59■□□□□ 0.41
RFFL-211ENST00000584541 KLHL20Q9Y2M5 609 aa17.59■□□□□ 0.41
RFFL-211ENST00000584541 RIF1Q5UIP0 2472 aaKnown RBP17.58■□□□□ 0.41
RFFL-211ENST00000584541 IGHV5-51A0A0C4DH38 117 aa17.58■□□□□ 0.4
RFFL-211ENST00000584541 IGKV1-8A0A0C4DH67 115 aa17.58■□□□□ 0.4
RFFL-211ENST00000584541 OR2A25A4D2G3 310 aa17.58■□□□□ 0.4
RFFL-211ENST00000584541 TMX2-CTNND1H3BSU7 103 aa17.58■□□□□ 0.4
RFFL-211ENST00000584541 PPP6CO00743 305 aa17.58■□□□□ 0.4
RFFL-211ENST00000584541 WFS1O76024 890 aa17.58■□□□□ 0.4
RFFL-211ENST00000584541 OR4F21O95013 312 aa17.58■□□□□ 0.4
RFFL-211ENST00000584541 CHRNGP07510 517 aa17.58■□□□□ 0.4
RFFL-211ENST00000584541 ANKRD34CP0C6C1 535 aa17.58■□□□□ 0.4
RFFL-211ENST00000584541 FTH1P19P0C7X4 201 aa17.58■□□□□ 0.4
RFFL-211ENST00000584541 THRAP10827 490 aa17.58■□□□□ 0.4
RFFL-211ENST00000584541 JUPP14923 745 aa17.58■□□□□ 0.4
RFFL-211ENST00000584541 EZRP15311 586 aaKnown RBP17.58■□□□□ 0.4
RFFL-211ENST00000584541 MLLT3P42568 568 aaPredicted RBP17.58■□□□□ 0.4
RFFL-211ENST00000584541 CCR10P46092 362 aa17.58■□□□□ 0.4
RFFL-211ENST00000584541 SEPHS1P49903 392 aa17.58■□□□□ 0.4
RFFL-211ENST00000584541 SH3BP2P78314 561 aa17.58■□□□□ 0.4
RFFL-211ENST00000584541 HSD11B2P80365 405 aa17.58■□□□□ 0.4
RFFL-211ENST00000584541 INSM1Q01101 510 aaPredicted RBP17.58■□□□□ 0.4
RFFL-211ENST00000584541 SLBPQ14493 270 aaKnown RBP eCLIP17.58■□□□□ 0.4
RFFL-211ENST00000584541 GGTA1PQ4G0N0 100 aa17.58■□□□□ 0.4
RFFL-211ENST00000584541 ZC3H12BQ5HYM0 836 aaKnown RBP17.58■□□□□ 0.4
RFFL-211ENST00000584541 TMTC4Q5T4D3 741 aa17.58■□□□□ 0.4
RFFL-211ENST00000584541 TTC19Q6DKK2 380 aaPredicted RBP17.58■□□□□ 0.4
RFFL-211ENST00000584541 FCRL6Q6DN72 434 aa17.58■□□□□ 0.4
RFFL-211ENST00000584541 ZNF574Q6ZN55 896 aaPredicted RBP17.58■□□□□ 0.4
RFFL-211ENST00000584541 TMPRSS9Q7Z410 1059 aa17.58■□□□□ 0.4
RFFL-211ENST00000584541 MTERF4Q7Z6M4 381 aaKnown RBP17.58■□□□□ 0.4
RFFL-211ENST00000584541 SYVN1Q86TM6 617 aa17.58■□□□□ 0.4
RFFL-211ENST00000584541 CUZD1Q86UP6 607 aa17.58■□□□□ 0.4
RFFL-211ENST00000584541 PAQR7Q86WK9 346 aa17.58■□□□□ 0.4
RFFL-211ENST00000584541 LSMEM2Q8N112 164 aa17.58■□□□□ 0.4
RFFL-211ENST00000584541 AFAP1L2Q8N4X5 818 aa17.58■□□□□ 0.4
RFFL-211ENST00000584541 DCBLD1Q8N8Z6 715 aa17.58■□□□□ 0.4
RFFL-211ENST00000584541 REPS1Q96D71 796 aa17.58■□□□□ 0.4
RFFL-211ENST00000584541 CCDC74BQ96LY2 380 aa17.58■□□□□ 0.4
RFFL-211ENST00000584541 SHCBP1LQ9BZQ2 653 aa17.58■□□□□ 0.4
RFFL-211ENST00000584541 ILKAPQ9H0C8 392 aaPredicted RBP17.58■□□□□ 0.4
RFFL-211ENST00000584541 ZNF768Q9H5H4 540 aaKnown RBP17.58■□□□□ 0.4
RFFL-211ENST00000584541 GEMIN8Q9NWZ8 242 aaKnown RBP17.58■□□□□ 0.4
RFFL-211ENST00000584541 SEMA5BQ9P283 1151 aa17.58■□□□□ 0.4
RFFL-211ENST00000584541 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.58■□□□□ 0.4
RFFL-211ENST00000584541 RNF11Q9Y3C5 154 aa17.58■□□□□ 0.4
RFFL-211ENST00000584541 PCDHGA11Q9Y5H2 935 aa17.58■□□□□ 0.4
RFFL-211ENST00000584541 MDC1Q14676 2089 aaKnown RBP17.58■□□□□ 0.4
RFFL-211ENST00000584541 COL27A1Q8IZC6 1860 aaPredicted RBP17.57■□□□□ 0.4
RFFL-211ENST00000584541 TRBC2A0A5B9 178 aa17.57■□□□□ 0.4
RFFL-211ENST00000584541 UBFD1O14562 309 aaKnown RBP17.57■□□□□ 0.4
RFFL-211ENST00000584541 ITM2AO43736 263 aa17.57■□□□□ 0.4
RFFL-211ENST00000584541 SNNO75324 88 aaPredicted RBP17.57■□□□□ 0.4
RFFL-211ENST00000584541 LYPLA1O75608 230 aaPredicted RBP17.57■□□□□ 0.4
RFFL-211ENST00000584541 HMOX2P30519 316 aa17.57■□□□□ 0.4
RFFL-211ENST00000584541 INHBCP55103 352 aa17.57■□□□□ 0.4
RFFL-211ENST00000584541 ERVPABLB-1P60509 514 aa17.57■□□□□ 0.4
RFFL-211ENST00000584541 RPS15AP62244 130 aaKnown RBP17.57■□□□□ 0.4
RFFL-211ENST00000584541 REEP5Q00765 189 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms