RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 ALOX12P18054 663 aa3.24□□□□□ -1.89
COPS3-217ENST00000583160 PAX3P23760 479 aa3.24□□□□□ -1.89
COPS3-217ENST00000583160 MTHFRP42898 656 aa3.24□□□□□ -1.89
COPS3-217ENST00000583160 DNA2P51530 1060 aa3.24□□□□□ -1.89
COPS3-217ENST00000583160 MYL7Q01449 175 aa3.24□□□□□ -1.89
COPS3-217ENST00000583160 BAATQ14032 418 aaPredicted RBP3.24□□□□□ -1.89
COPS3-217ENST00000583160 VEZF1Q14119 521 aa3.24□□□□□ -1.89
COPS3-217ENST00000583160 TAB1Q15750 504 aa3.24□□□□□ -1.89
COPS3-217ENST00000583160 RILPL1Q5EBL4 403 aa3.24□□□□□ -1.89
COPS3-217ENST00000583160 FAM198BQ6UWH4 519 aa3.24□□□□□ -1.89
COPS3-217ENST00000583160 NDUFAF2Q8N183 169 aa3.24□□□□□ -1.89
COPS3-217ENST00000583160 CFAP61Q8NHU2 1237 aa3.24□□□□□ -1.89
COPS3-217ENST00000583160 CNRIP1Q96F85 164 aaPredicted RBP3.24□□□□□ -1.89
COPS3-217ENST00000583160 RSRC1Q96IZ7 334 aaKnown RBP3.24□□□□□ -1.89
COPS3-217ENST00000583160 TDRD1Q9BXT4 1180 aaKnown RBP3.24□□□□□ -1.89
COPS3-217ENST00000583160 MRPL1Q9BYD6 325 aaKnown RBP3.24□□□□□ -1.89
COPS3-217ENST00000583160 HOXD1Q9GZZ0 328 aa3.24□□□□□ -1.89
COPS3-217ENST00000583160 WDR83OSQ9Y284 106 aa3.24□□□□□ -1.89
COPS3-217ENST00000583160 WIPI2Q9Y4P8 454 aa3.24□□□□□ -1.89
COPS3-217ENST00000583160 ADAMTSL3P82987 1691 aa3.24□□□□□ -1.89
COPS3-217ENST00000583160 ATP10BO94823 1461 aa3.23□□□□□ -1.89
COPS3-217ENST00000583160 ADGRL1O94910 1474 aa3.23□□□□□ -1.89
COPS3-217ENST00000583160 NEO1Q92859 1461 aa3.23□□□□□ -1.89
COPS3-217ENST00000583160 A0A1W2PPQ1 181 aa3.23□□□□□ -1.89
COPS3-217ENST00000583160 O00370 1275 aa3.23□□□□□ -1.89
COPS3-217ENST00000583160 CEACAM4O75871 244 aa3.23□□□□□ -1.89
COPS3-217ENST00000583160 LINGO3P0C6S8 592 aa3.23□□□□□ -1.89
COPS3-217ENST00000583160 IRF2P14316 349 aa3.23□□□□□ -1.89
COPS3-217ENST00000583160 PDHA2P29803 388 aa3.23□□□□□ -1.89
COPS3-217ENST00000583160 PTGER4P35408 488 aa3.23□□□□□ -1.89
COPS3-217ENST00000583160 TMEM132DQ14C87 1099 aa3.23□□□□□ -1.89
COPS3-217ENST00000583160 EEA1Q15075 1411 aa3.23□□□□□ -1.89
COPS3-217ENST00000583160 PTPN14Q15678 1187 aa3.23□□□□□ -1.89
COPS3-217ENST00000583160 HIGD2BQ4VC39 106 aa3.23□□□□□ -1.89
COPS3-217ENST00000583160 ITPRIPL1Q6GPH6 555 aa3.23□□□□□ -1.89
COPS3-217ENST00000583160 PRR27Q6MZM9 219 aa3.23□□□□□ -1.89
COPS3-217ENST00000583160 CD109Q6YHK3 1445 aa3.23□□□□□ -1.89
COPS3-217ENST00000583160 CHMP1BQ7LBR1 199 aa3.23□□□□□ -1.89
COPS3-217ENST00000583160 SLC47A2Q86VL8 602 aa3.23□□□□□ -1.89
COPS3-217ENST00000583160 C11orf53Q8IXP5 236 aa3.23□□□□□ -1.89
COPS3-217ENST00000583160 OR5T2Q8NGG2 359 aa3.23□□□□□ -1.89
COPS3-217ENST00000583160 C9orf43Q8TAL5 461 aaPredicted RBP3.23□□□□□ -1.89
COPS3-217ENST00000583160 ZPLD1Q8TCW7 415 aa3.23□□□□□ -1.89
COPS3-217ENST00000583160 CHPT1Q8WUD6 406 aa3.23□□□□□ -1.89
COPS3-217ENST00000583160 FAM71F1Q96KD3 344 aaPredicted RBP3.23□□□□□ -1.89
COPS3-217ENST00000583160 FAM218AQ96MZ4 157 aa3.23□□□□□ -1.89
COPS3-217ENST00000583160 OVOL2Q9BRP0 275 aa3.23□□□□□ -1.89
COPS3-217ENST00000583160 ZMYND12Q9H0C1 365 aa3.23□□□□□ -1.89
COPS3-217ENST00000583160 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.23□□□□□ -1.89
COPS3-217ENST00000583160 PRMT7Q9NVM4 692 aaPredicted RBP3.23□□□□□ -1.89
COPS3-217ENST00000583160 MRPL15Q9P015 296 aaKnown RBP3.23□□□□□ -1.89
COPS3-217ENST00000583160 CTSZQ9UBR2 303 aa3.23□□□□□ -1.89
COPS3-217ENST00000583160 PA2G4Q9UQ80 394 aaKnown RBP3.23□□□□□ -1.89
COPS3-217ENST00000583160 CHKBQ9Y259 395 aa3.23□□□□□ -1.89
COPS3-217ENST00000583160 ZNF510Q9Y2H8 683 aa3.23□□□□□ -1.89
COPS3-217ENST00000583160 TRBV5-5A0A0J9YX44 114 aa3.22□□□□□ -1.89
COPS3-217ENST00000583160 A0A1W2PNU3 283 aaPredicted RBP3.22□□□□□ -1.89
COPS3-217ENST00000583160 ERAL1O75616 437 aaKnown RBP3.22□□□□□ -1.89
COPS3-217ENST00000583160 KRT33AO76009 404 aa3.22□□□□□ -1.89
COPS3-217ENST00000583160 RAB40ALP0C0E4 278 aa3.22□□□□□ -1.89
COPS3-217ENST00000583160 PORP16435 677 aaPredicted RBP3.22□□□□□ -1.89
COPS3-217ENST00000583160 CAPGP40121 348 aa3.22□□□□□ -1.89
COPS3-217ENST00000583160 EIF2DP41214 584 aaKnown RBP3.22□□□□□ -1.89
COPS3-217ENST00000583160 ALDH3A2P51648 485 aa3.22□□□□□ -1.89
COPS3-217ENST00000583160 VAMP7P51809 220 aa3.22□□□□□ -1.89
COPS3-217ENST00000583160 IRX4P78413 519 aa3.22□□□□□ -1.89
COPS3-217ENST00000583160 ZFP36L1Q07352 338 aaKnown RBP3.22□□□□□ -1.89
COPS3-217ENST00000583160 CD300CQ08708 224 aa3.22□□□□□ -1.89
COPS3-217ENST00000583160 CUL4AQ13619 759 aa3.22□□□□□ -1.89
COPS3-217ENST00000583160 ITGA7Q13683 1181 aa3.22□□□□□ -1.89
COPS3-217ENST00000583160 FAM189A2Q15884 450 aa3.22□□□□□ -1.89
COPS3-217ENST00000583160 MEA1Q16626 185 aa3.22□□□□□ -1.89
COPS3-217ENST00000583160 ZFAND4Q86XD8 727 aa3.22□□□□□ -1.89
COPS3-217ENST00000583160 OR10Q1Q8NGQ4 319 aa3.22□□□□□ -1.89
COPS3-217ENST00000583160 ATL1Q8WXF7 558 aa3.22□□□□□ -1.89
COPS3-217ENST00000583160 EVI5LQ96CN4 794 aa3.22□□□□□ -1.89
COPS3-217ENST00000583160 LGMNQ99538 433 aa3.22□□□□□ -1.89
COPS3-217ENST00000583160 ZNF577Q9BSK1 485 aa3.22□□□□□ -1.89
COPS3-217ENST00000583160 PDE7BQ9NP56 450 aa3.22□□□□□ -1.89
COPS3-217ENST00000583160 TBC1D22BQ9NU19 505 aa3.22□□□□□ -1.89
COPS3-217ENST00000583160 HAO2Q9NYQ3 351 aa3.22□□□□□ -1.89
COPS3-217ENST00000583160 DDX25Q9UHL0 483 aaKnown RBP3.22□□□□□ -1.89
COPS3-217ENST00000583160 RNF150Q9ULK6 438 aa3.22□□□□□ -1.89
COPS3-217ENST00000583160 PCDHGB4Q9UN71 923 aa3.22□□□□□ -1.89
COPS3-217ENST00000583160 RAPGEF6Q8TEU7 1601 aa3.22□□□□□ -1.89
COPS3-217ENST00000583160 ZMYM4Q5VZL5 1548 aa3.21□□□□□ -1.9
COPS3-217ENST00000583160 GLOD5A6NK44 160 aa3.21□□□□□ -1.9
COPS3-217ENST00000583160 POP4O95707 220 aaKnown RBP3.21□□□□□ -1.9
COPS3-217ENST00000583160 IGKV3-15P01624 115 aa3.21□□□□□ -1.9
COPS3-217ENST00000583160 KRTAP1-4P0C5Y4 121 aa3.21□□□□□ -1.9
COPS3-217ENST00000583160 ELAVL4P26378 380 aaKnown RBP3.21□□□□□ -1.9
COPS3-217ENST00000583160 PIK3R1P27986 724 aa3.21□□□□□ -1.9
COPS3-217ENST00000583160 CDC25CP30307 473 aa3.21□□□□□ -1.9
COPS3-217ENST00000583160 OXTRP30559 389 aa3.21□□□□□ -1.9
COPS3-217ENST00000583160 OR3A2P47893 321 aa3.21□□□□□ -1.9
COPS3-217ENST00000583160 CLNS1AP54105 237 aaKnown RBP3.21□□□□□ -1.9
COPS3-217ENST00000583160 GEMIN4P57678 1058 aaKnown RBP3.21□□□□□ -1.9
COPS3-217ENST00000583160 UBXN2AP68543 259 aa3.21□□□□□ -1.9
COPS3-217ENST00000583160 STK4Q13043 487 aa3.21□□□□□ -1.9
COPS3-217ENST00000583160 SGCGQ13326 291 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms