RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 CLEC6AQ6EIG7 209 aa11.55□□□□□ -0.56
CCDC57-216ENST00000582885 HIST2H2AA3Q6FI13 130 aa11.55□□□□□ -0.56
CCDC57-216ENST00000582885 WDR74Q6RFH5 385 aaPredicted RBP11.55□□□□□ -0.56
CCDC57-216ENST00000582885 PRR23CQ6ZRP0 262 aa11.55□□□□□ -0.56
CCDC57-216ENST00000582885 SPRED1Q7Z699 444 aa11.55□□□□□ -0.56
CCDC57-216ENST00000582885 KRT78Q8N1N4 520 aa11.55□□□□□ -0.56
CCDC57-216ENST00000582885 RSC1A1Q92681 617 aa11.55□□□□□ -0.56
CCDC57-216ENST00000582885 USP7Q93009 1102 aa11.55□□□□□ -0.56
CCDC57-216ENST00000582885 CCDC74AQ96AQ1 378 aa11.55□□□□□ -0.56
CCDC57-216ENST00000582885 REPS1Q96D71 796 aa11.55□□□□□ -0.56
CCDC57-216ENST00000582885 SEC16BQ96JE7 1060 aa11.55□□□□□ -0.56
CCDC57-216ENST00000582885 KCNA7Q96RP8 456 aa11.55□□□□□ -0.56
CCDC57-216ENST00000582885 EDEM2Q9BV94 578 aa11.55□□□□□ -0.56
CCDC57-216ENST00000582885 NPHS2Q9NP85 383 aa11.55□□□□□ -0.56
CCDC57-216ENST00000582885 SLC6A20Q9NP91 592 aa11.55□□□□□ -0.56
CCDC57-216ENST00000582885 FAM86C1Q9NVL1 165 aa11.55□□□□□ -0.56
CCDC57-216ENST00000582885 GEMIN8Q9NWZ8 242 aaKnown RBP11.55□□□□□ -0.56
CCDC57-216ENST00000582885 MARCOQ9UEW3 520 aaPredicted RBP11.55□□□□□ -0.56
CCDC57-216ENST00000582885 ADGRE2Q9UHX3 823 aa11.55□□□□□ -0.56
CCDC57-216ENST00000582885 EP300Q09472 2414 aaPredicted RBP11.55□□□□□ -0.56
CCDC57-216ENST00000582885 USP34Q70CQ2 3546 aa11.55□□□□□ -0.56
CCDC57-216ENST00000582885 A0A0J9YY10 115 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 TRBC2A0A5B9 178 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 H7BY64 318 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 MANBAO00462 879 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 DUX1O43812 170 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 ULK1O75385 1050 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 KITP10721 976 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 CD59P13987 128 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 HSD3B1P14060 373 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 CKMT2P17540 419 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 TYRP1P17643 537 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 HSD3B2P26439 372 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 VARSP26640 1264 aaKnown RBP11.54□□□□□ -0.56
CCDC57-216ENST00000582885 GSTM2P28161 218 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 ALDH4A1P30038 563 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 SERPINB1P30740 379 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 GRIA3P42263 894 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 OR1D5P58170 312 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 YBX1P67809 324 aaKnown RBP11.54□□□□□ -0.56
CCDC57-216ENST00000582885 CSNK1G2P78368 415 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 REEP5Q00765 189 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 SLBPQ14493 270 aaKnown RBP eCLIP11.54□□□□□ -0.56
CCDC57-216ENST00000582885 ZRSR2Q15696 482 aaKnown RBP11.54□□□□□ -0.56
CCDC57-216ENST00000582885 CPSF6Q16630 551 aaKnown RBP eCLIP11.54□□□□□ -0.56
CCDC57-216ENST00000582885 GKAP1Q5VSY0 366 aaPredicted RBP11.54□□□□□ -0.56
CCDC57-216ENST00000582885 KIAA1614Q5VZ46 1190 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 FRG2Q64ET8 278 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 MED27Q6P2C8 311 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 GUSBP11Q6P575 273 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 EPGNQ6UW88 154 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 TMIGD1Q6UXZ0 262 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 MAVSQ7Z434 540 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 TRIM46Q7Z4K8 759 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 SPATA21Q7Z572 469 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 PAQR7Q86WK9 346 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 PLXDC1Q8IUK5 500 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 TBC1D19Q8N5T2 526 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 DCBLD1Q8N8Z6 715 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 WDR20Q8TBZ3 569 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 AGR3Q8TD06 166 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 BCAS4Q8TDM0 211 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 TWIST2Q8WVJ9 160 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 ZDHHC12Q96GR4 267 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 AHCYL2Q96HN2 611 aaKnown RBP11.54□□□□□ -0.56
CCDC57-216ENST00000582885 PRAP1Q96NZ9 151 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 FRG2BQ96QU4 278 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 DPYSL5Q9BPU6 564 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 ELAC2Q9BQ52 826 aaKnown RBP11.54□□□□□ -0.56
CCDC57-216ENST00000582885 PLCD4Q9BRC7 762 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 DPH7Q9BTV6 452 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 CHRNA10Q9GZZ6 450 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 ABCG4Q9H172 646 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 RHBGQ9H310 441 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 SEMA6CQ9H3T2 930 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 MEAF6Q9HAF1 191 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 KCNK13Q9HB14 408 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 PARD6AQ9NPB6 346 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 C1GALT1Q9NS00 363 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 CUEDC1Q9NWM3 386 aaPredicted RBP11.54□□□□□ -0.56
CCDC57-216ENST00000582885 ZNF490Q9ULM2 529 aaPredicted RBP11.54□□□□□ -0.56
CCDC57-216ENST00000582885 PPT2Q9UMR5 302 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 APOBEC2Q9Y235 224 aaKnown RBP11.54□□□□□ -0.56
CCDC57-216ENST00000582885 BTBD3Q9Y2F9 522 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 TIMM22Q9Y584 194 aa11.54□□□□□ -0.56
CCDC57-216ENST00000582885 MN1Q10571 1320 aaPredicted RBP11.54□□□□□ -0.56
CCDC57-216ENST00000582885 CPED1A4D0V7 1026 aa11.53□□□□□ -0.56
CCDC57-216ENST00000582885 OR2A25A4D2G3 310 aa11.53□□□□□ -0.56
CCDC57-216ENST00000582885 TLCD2A6NGC4 264 aa11.53□□□□□ -0.56
CCDC57-216ENST00000582885 NPIPB8E9PQR5 432 aa11.53□□□□□ -0.56
CCDC57-216ENST00000582885 FOXE1O00358 373 aaPredicted RBP11.53□□□□□ -0.56
CCDC57-216ENST00000582885 NDUFAB1O14561 156 aa11.53□□□□□ -0.56
CCDC57-216ENST00000582885 VPS4BO75351 444 aa11.53□□□□□ -0.56
CCDC57-216ENST00000582885 LDOC1O95751 146 aaPredicted RBP11.53□□□□□ -0.56
CCDC57-216ENST00000582885 C9P02748 559 aa11.53□□□□□ -0.56
CCDC57-216ENST00000582885 GP1BAP07359 652 aa11.53□□□□□ -0.56
CCDC57-216ENST00000582885 EZRP15311 586 aaKnown RBP11.53□□□□□ -0.56
CCDC57-216ENST00000582885 ACP1P24666 158 aa11.53□□□□□ -0.56
CCDC57-216ENST00000582885 CD1CP29017 333 aa11.53□□□□□ -0.56
CCDC57-216ENST00000582885 SERPINB3P29508 390 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms