RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 GALNT4Q8N4A0 578 aa21.88■■□□□ 1.09
CCDC47-204ENST00000582252 PACRGLQ8N7B6 248 aa21.88■■□□□ 1.09
CCDC47-204ENST00000582252 IL17RCQ8NAC3 791 aa21.88■■□□□ 1.09
CCDC47-204ENST00000582252 PAPD5Q8NDF8 572 aaKnown RBP21.88■■□□□ 1.09
CCDC47-204ENST00000582252 OR7G3Q8NG95 312 aa21.88■■□□□ 1.09
CCDC47-204ENST00000582252 NELL1Q92832 810 aa21.88■■□□□ 1.09
CCDC47-204ENST00000582252 GBP5Q96PP8 586 aa21.88■■□□□ 1.09
CCDC47-204ENST00000582252 C1QTNF7Q9BXJ2 289 aa21.88■■□□□ 1.09
CCDC47-204ENST00000582252 WDR26Q9H7D7 661 aa21.88■■□□□ 1.09
CCDC47-204ENST00000582252 PHPT1Q9NRX4 125 aaPredicted RBP21.88■■□□□ 1.09
CCDC47-204ENST00000582252 DLGAP2Q9P1A6 1054 aa21.88■■□□□ 1.09
CCDC47-204ENST00000582252 NCK1P16333 377 aa21.87■■□□□ 1.09
CCDC47-204ENST00000582252 GGT1P19440 569 aa21.87■■□□□ 1.09
CCDC47-204ENST00000582252 KIR3DL1P43629 444 aa21.87■■□□□ 1.09
CCDC47-204ENST00000582252 CLCN2P51788 898 aa21.87■■□□□ 1.09
CCDC47-204ENST00000582252 RPS21P63220 83 aaKnown RBP21.87■■□□□ 1.09
CCDC47-204ENST00000582252 TSTA3Q13630 321 aaPredicted RBP21.87■■□□□ 1.09
CCDC47-204ENST00000582252 SELPLGQ14242 412 aa21.87■■□□□ 1.09
CCDC47-204ENST00000582252 PDK3Q15120 406 aa21.87■■□□□ 1.09
CCDC47-204ENST00000582252 KIAA1161Q6NSJ0 714 aa21.87■■□□□ 1.09
CCDC47-204ENST00000582252 HMBOX1Q6NT76 420 aa21.87■■□□□ 1.09
CCDC47-204ENST00000582252 XKR5Q6UX68 686 aa21.87■■□□□ 1.09
CCDC47-204ENST00000582252 AMIGO2Q86SJ2 522 aa21.87■■□□□ 1.09
CCDC47-204ENST00000582252 SLC5A11Q8WWX8 675 aa21.87■■□□□ 1.09
CCDC47-204ENST00000582252 HAUS8Q9BT25 410 aa21.87■■□□□ 1.09
CCDC47-204ENST00000582252 PAIP1Q9H074 479 aaKnown RBP21.87■■□□□ 1.09
CCDC47-204ENST00000582252 NEUROG3Q9Y4Z2 214 aa21.87■■□□□ 1.09
CCDC47-204ENST00000582252 AP4B1Q9Y6B7 739 aa21.87■■□□□ 1.09
CCDC47-204ENST00000582252 TRPM6Q9BX84 2022 aa21.87■■□□□ 1.09
CCDC47-204ENST00000582252 A6NHS1 94 aa21.86■■□□□ 1.09
CCDC47-204ENST00000582252 SHISA7A6NL88 538 aa21.86■■□□□ 1.09
CCDC47-204ENST00000582252 NPPBP16860 134 aa21.86■■□□□ 1.09
CCDC47-204ENST00000582252 ZNF26P17031 533 aaPredicted RBP21.86■■□□□ 1.09
CCDC47-204ENST00000582252 HRH2P25021 359 aa21.86■■□□□ 1.09
CCDC47-204ENST00000582252 TACR1P25103 407 aa21.86■■□□□ 1.09
CCDC47-204ENST00000582252 TAP2Q03519 686 aa21.86■■□□□ 1.09
CCDC47-204ENST00000582252 PRKCQQ04759 706 aa21.86■■□□□ 1.09
CCDC47-204ENST00000582252 SGCGQ13326 291 aa21.86■■□□□ 1.09
CCDC47-204ENST00000582252 CCINQ13939 588 aa21.86■■□□□ 1.09
CCDC47-204ENST00000582252 ARHGAP19Q14CB8 494 aa21.86■■□□□ 1.09
CCDC47-204ENST00000582252 ZNF852Q6ZMS4 543 aa21.86■■□□□ 1.09
CCDC47-204ENST00000582252 FAM83HQ6ZRV2 1179 aaPredicted RBP21.86■■□□□ 1.09
CCDC47-204ENST00000582252 HUS1BQ8NHY5 278 aa21.86■■□□□ 1.09
CCDC47-204ENST00000582252 GANCQ8TET4 914 aa21.86■■□□□ 1.09
CCDC47-204ENST00000582252 NUDT8Q8WV74 236 aa21.86■■□□□ 1.09
CCDC47-204ENST00000582252 CENPNQ96H22 339 aaPredicted RBP21.86■■□□□ 1.09
CCDC47-204ENST00000582252 ZNF583Q96ND8 569 aa21.86■■□□□ 1.09
CCDC47-204ENST00000582252 HHIPQ96QV1 700 aa21.86■■□□□ 1.09
CCDC47-204ENST00000582252 PIF1Q9H611 641 aa21.86■■□□□ 1.09
CCDC47-204ENST00000582252 YY1AP1Q9H869 796 aa21.86■■□□□ 1.09
CCDC47-204ENST00000582252 COQ10BQ9H8M1 238 aa21.86■■□□□ 1.09
CCDC47-204ENST00000582252 AGPAT4Q9NRZ5 378 aa21.86■■□□□ 1.09
CCDC47-204ENST00000582252 INVSQ9Y283 1065 aa21.86■■□□□ 1.09
CCDC47-204ENST00000582252 TRBV5-3A0A0A0MS03 114 aa21.86■■□□□ 1.09
CCDC47-204ENST00000582252 EIF4E1BA6NMX2 242 aaKnown RBP21.86■■□□□ 1.09
CCDC47-204ENST00000582252 FOXE1O00358 373 aaPredicted RBP21.86■■□□□ 1.09
CCDC47-204ENST00000582252 KLF8O95600 359 aaPredicted RBP21.86■■□□□ 1.09
CCDC47-204ENST00000582252 DNTTP04053 509 aa21.86■■□□□ 1.09
CCDC47-204ENST00000582252 PIM1P11309 404 aaPredicted RBP21.86■■□□□ 1.09
CCDC47-204ENST00000582252 CDH1P12830 882 aa21.86■■□□□ 1.09
CCDC47-204ENST00000582252 TRPC1P48995 793 aa21.86■■□□□ 1.09
CCDC47-204ENST00000582252 MTAPQ13126 283 aa21.86■■□□□ 1.09
CCDC47-204ENST00000582252 INTS11Q5TA45 600 aaKnown RBP21.86■■□□□ 1.09
CCDC47-204ENST00000582252 THEMIS2Q5TEJ8 643 aa21.86■■□□□ 1.09
CCDC47-204ENST00000582252 LCTLQ6UWM7 567 aa21.86■■□□□ 1.09
CCDC47-204ENST00000582252 ZBTB49Q6ZSB9 765 aa21.86■■□□□ 1.09
CCDC47-204ENST00000582252 LAS2Q8IYD9 372 aa21.86■■□□□ 1.09
CCDC47-204ENST00000582252 TFGQ92734 400 aaPredicted RBP21.86■■□□□ 1.09
CCDC47-204ENST00000582252 BIRC7Q96CA5 298 aa21.86■■□□□ 1.09
CCDC47-204ENST00000582252 ZNF597Q96LX8 424 aa21.86■■□□□ 1.09
CCDC47-204ENST00000582252 C9orf16Q9BUW7 83 aa21.86■■□□□ 1.09
CCDC47-204ENST00000582252 EBPLQ9BY08 206 aa21.86■■□□□ 1.09
CCDC47-204ENST00000582252 GORASP2Q9H8Y8 452 aa21.86■■□□□ 1.09
CCDC47-204ENST00000582252 FAM120CQ9NX05 1096 aaKnown RBP21.86■■□□□ 1.09
CCDC47-204ENST00000582252 PPT2Q9UMR5 302 aa21.86■■□□□ 1.09
CCDC47-204ENST00000582252 ELOVL7A1L3X0 281 aa21.85■■□□□ 1.09
CCDC47-204ENST00000582252 MAGEB17A8MXT2 336 aa21.85■■□□□ 1.09
CCDC47-204ENST00000582252 FAM220BPB1ANY3 271 aa21.85■■□□□ 1.09
CCDC47-204ENST00000582252 HOXB2P14652 356 aa21.85■■□□□ 1.09
CCDC47-204ENST00000582252 SLBPQ14493 270 aaKnown RBP eCLIP21.85■■□□□ 1.09
CCDC47-204ENST00000582252 IRF4Q15306 451 aa21.85■■□□□ 1.09
CCDC47-204ENST00000582252 PRAMEF14Q5SWL7 426 aa21.85■■□□□ 1.09
CCDC47-204ENST00000582252 PRAMEF13Q5VWM6 474 aa21.85■■□□□ 1.09
CCDC47-204ENST00000582252 NXPE4Q6UWF7 544 aa21.85■■□□□ 1.09
CCDC47-204ENST00000582252 DNAJC14Q6Y2X3 702 aaPredicted RBP21.85■■□□□ 1.09
CCDC47-204ENST00000582252 LRRC56Q8IYG6 542 aaPredicted RBP21.85■■□□□ 1.09
CCDC47-204ENST00000582252 RAB42Q8N4Z0 105 aa21.85■■□□□ 1.09
CCDC47-204ENST00000582252 OSBPL11Q9BXB4 747 aa21.85■■□□□ 1.09
CCDC47-204ENST00000582252 RPF2Q9H7B2 306 aaKnown RBP21.85■■□□□ 1.09
CCDC47-204ENST00000582252 FBXL12Q9NXK8 326 aa21.85■■□□□ 1.09
CCDC47-204ENST00000582252 SLC25A37Q9NYZ2 338 aa21.85■■□□□ 1.09
CCDC47-204ENST00000582252 ACSL5Q9ULC5 683 aa21.85■■□□□ 1.09
CCDC47-204ENST00000582252 SCML1Q9UN30 329 aa21.85■■□□□ 1.09
CCDC47-204ENST00000582252 C19orf67A6NJJ6 358 aa21.84■■□□□ 1.09
CCDC47-204ENST00000582252 RFXANKO14593 260 aa21.84■■□□□ 1.09
CCDC47-204ENST00000582252 ADAM23O75077 832 aa21.84■■□□□ 1.09
CCDC47-204ENST00000582252 SCELO95171 688 aa21.84■■□□□ 1.09
CCDC47-204ENST00000582252 LRATO95237 230 aa21.84■■□□□ 1.09
CCDC47-204ENST00000582252 COX7A2P14406 83 aa21.84■■□□□ 1.09
CCDC47-204ENST00000582252 HOXB6P17509 224 aaKnown RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms