RNA–Protein interactions for RNA: ENST00000577474.2

TRAPPC8-203, Transcript of trafficking protein particle complex 8, humanhuman

TSL 4

Gene TRAPPC8, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-203ENST00000577474 ZNF560Q96MR9 790 aa4.34□□□□□ -1.71
TRAPPC8-203ENST00000577474 TSGA13Q96PP4 275 aa4.34□□□□□ -1.71
TRAPPC8-203ENST00000577474 MAP3K3Q99759 626 aa4.34□□□□□ -1.71
TRAPPC8-203ENST00000577474 SPRTNQ9H040 489 aaPredicted RBP4.34□□□□□ -1.71
TRAPPC8-203ENST00000577474 DDX47Q9H0S4 455 aaKnown RBP4.34□□□□□ -1.71
TRAPPC8-203ENST00000577474 C10orf88Q9H8K7 445 aa4.34□□□□□ -1.71
TRAPPC8-203ENST00000577474 APOBEC3GQ9HC16 384 aaKnown RBP4.34□□□□□ -1.71
TRAPPC8-203ENST00000577474 MIS18AQ9NYP9 233 aa4.34□□□□□ -1.71
TRAPPC8-203ENST00000577474 NOCTQ9UK39 431 aaKnown RBP4.34□□□□□ -1.71
TRAPPC8-203ENST00000577474 SLC7A7Q9UM01 511 aa4.34□□□□□ -1.71
TRAPPC8-203ENST00000577474 KCNJ14Q9UNX9 436 aa4.34□□□□□ -1.71
TRAPPC8-203ENST00000577474 AURKCQ9UQB9 309 aa4.34□□□□□ -1.71
TRAPPC8-203ENST00000577474 TMED3Q9Y3Q3 217 aa4.34□□□□□ -1.71
TRAPPC8-203ENST00000577474 CNTNAP2Q9UHC6 1331 aa4.34□□□□□ -1.71
TRAPPC8-203ENST00000577474 DHX29Q7Z478 1369 aaKnown RBP4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 TRAV18A0A075B6X5 111 aa4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 C2orf92A0A1B0GVN3 265 aa4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 A0A1W2PPI3 338 aa4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 C5orf51A6NDU8 294 aa4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 SYNGR3O43761 229 aa4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 PRKRAO75569 313 aaKnown RBP4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 MT-ATP6P00846 226 aa4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 HEXBP07686 556 aa4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 FAM200BP0CF97 657 aa4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 ACP2P11117 423 aa4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 SFNP31947 248 aa4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 CETN2P41208 172 aa4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 PCYT1AP49585 367 aa4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 POLR2FP61218 127 aaKnown RBP4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 RELQ04864 619 aaPredicted RBP4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 SLC3A1Q07837 685 aa4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 SLC20A2Q08357 652 aa4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 PPP1R8Q12972 351 aaKnown RBP4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 PDE7AQ13946 482 aa4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 KIR2DS3Q14952 304 aa4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 NONOQ15233 471 aaKnown RBP eCLIP4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 FAM171BQ6P995 826 aa4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 LCA5Q86VQ0 697 aa4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 ODF3L1Q8IXM7 274 aa4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 CRYBG2Q8N1P7 616 aa4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 PHF21BQ96EK2 531 aa4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 LINGO1Q96FE5 620 aa4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 HMCESQ96FZ2 354 aa4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 FAM20AQ96MK3 541 aa4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 URM1Q9BTM9 101 aaKnown RBP4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 ATG10Q9H0Y0 220 aa4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 TSPY26PQ9H489 355 aa4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 FGF21Q9NSA1 209 aa4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 SLC38A7Q9NVC3 462 aa4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 SLC12A6Q9UHW9 1150 aa4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 PCDHA7Q9UN72 937 aa4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 HBS1LQ9Y450 684 aaKnown RBP4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 AP1M2Q9Y6Q5 423 aa4.33□□□□□ -1.72
TRAPPC8-203ENST00000577474 HEG1Q9ULI3 1381 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 CGNL1Q0VF96 1302 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 TMEM129A0AVI4 362 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 CFAP73A6NFT4 308 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 ANKRD61A6NGH8 418 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 C2orf81A6NN90 581 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 C17orf105B2RV13 164 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 MAGEB2O15479 319 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 NME6O75414 186 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 PIGNO95427 931 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 BAG3O95817 575 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 TOMM40O96008 361 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 APOHP02749 345 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 IGKV2-30P06310 120 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 FCGR1AP12314 374 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 GP1BBP13224 206 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 ETS1P14921 441 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 ITGA2P17301 1181 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 NR1D1P20393 614 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 JAK1P23458 1154 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 SFTPDP35247 375 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 MAGEB1P43366 347 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 OR3A1P47881 315 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 NR2C2P49116 596 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 HOXA1P49639 335 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 THOP1P52888 689 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 TUBA1BP68363 451 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 IRX4P78413 519 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 GALK2Q01415 458 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 MBTD1Q05BQ5 628 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 RASGEF1BQ0VAM2 473 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 DLG1Q12959 904 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 NFATC4Q14934 902 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 C11orf87Q6NUJ2 197 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 ANKRD33Q7Z3H0 272 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 PIWIL4Q7Z3Z4 852 aaKnown RBP4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 CCDC60Q8IWA6 550 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 ELMOD2Q8IZ81 293 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 APCDD1Q8J025 514 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 LEMD2Q8NC56 503 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 PHLDA1Q8WV24 401 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 SYAP1Q96A49 352 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 SLCO4A1Q96BD0 722 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 ULK4Q96C45 1275 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 DDX50Q9BQ39 737 aaKnown RBP4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 RTP3Q9BQQ7 232 aa4.32□□□□□ -1.72
TRAPPC8-203ENST00000577474 ZNF559Q9BR84 538 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms