RNA–Protein interactions for RNA: ENST00000575882.5

TOM1L1-221, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOM1L1, Length 2,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-221ENST00000575882 GSSP48637 474 aa16.69■□□□□ 0.26
TOM1L1-221ENST00000575882 WNT3P56703 355 aa16.69■□□□□ 0.26
TOM1L1-221ENST00000575882 HSPA14Q0VDF9 509 aa16.69■□□□□ 0.26
TOM1L1-221ENST00000575882 FRG2Q64ET8 278 aa16.69■□□□□ 0.26
TOM1L1-221ENST00000575882 TTC23LQ6PF05 361 aa16.69■□□□□ 0.26
TOM1L1-221ENST00000575882 CYP2U1Q7Z449 544 aa16.69■□□□□ 0.26
TOM1L1-221ENST00000575882 CLECL1Q8IZS7 167 aa16.69■□□□□ 0.26
TOM1L1-221ENST00000575882 L3MBTL4Q8NA19 623 aa16.69■□□□□ 0.26
TOM1L1-221ENST00000575882 CSGALNACT1Q8TDX6 532 aa16.69■□□□□ 0.26
TOM1L1-221ENST00000575882 FRG2BQ96QU4 278 aa16.69■□□□□ 0.26
TOM1L1-221ENST00000575882 ERVK-11Q9UQG0 969 aa16.69■□□□□ 0.26
TOM1L1-221ENST00000575882 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 PRAMEF4O60810 478 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 GALTP07902 379 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 COL6A1P12109 1028 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 COX7A2P14406 83 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 ITPKAP23677 461 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 AOAHP28039 575 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 ABRQ12979 859 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 PRSS36Q5K4E3 855 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 PRAMEF9Q5VWM5 478 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 ZSWIM9Q86XI8 627 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 HJURPQ8NCD3 748 aaPredicted RBP16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 CDC26Q8NHZ8 85 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 COPS4Q9BT78 406 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 SLC12A9Q9BXP2 914 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 ANKHQ9HCJ1 492 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 NMRK2Q9NPI5 230 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 ABCB10Q9NRK6 738 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 ANKMY1Q9P2S6 941 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 SLCO3A1Q9UIG8 710 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 ITGB1BP2Q9UKP3 347 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 VPS4AQ9UN37 437 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 ZNF232Q9UNY5 417 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 SLC22A14Q9Y267 594 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 PCDHGA6Q9Y5G7 932 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 NPIPB15A6NHN6 443 aaPredicted RBP16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 AIREO43918 545 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 SCN2BO60939 215 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 HIST1H2AGP0C0S8 130 aaPredicted RBP16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 HIST1H2ADP20671 130 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 SERPINB1P30740 379 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 SLC6A12P48065 614 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 ACLYP53396 1101 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 SMAD3P84022 425 aaKnown RBP16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 B4GALNT1Q00973 533 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 SRSF11Q05519 484 aaKnown RBP16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 SLC13A2Q13183 592 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 GPR153Q6NV75 609 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 TMEM53Q6P2H8 277 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 Q6ZPB1 254 aaPredicted RBP16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 ARMC8Q8IUR7 673 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 P3H2Q8IVL5 708 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 TCAIMQ8N3R3 496 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 UPF1Q92900 1129 aaKnown RBP eCLIP16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 HIST1H2AHQ96KK5 128 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 HIST1H2AJQ99878 128 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 C19orf43Q9BQ61 176 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 H2AFJQ9BTM1 129 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 ZDHHC3Q9NYG2 299 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 STOML2Q9UJZ1 356 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 RNF6Q9Y252 685 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 BRCA2P51587 3418 aa16.68■□□□□ 0.26
TOM1L1-221ENST00000575882 ZNF106Q9H2Y7 1883 aaKnown RBP16.67■□□□□ 0.26
TOM1L1-221ENST00000575882 NPIPB8E9PQR5 432 aa16.67■□□□□ 0.26
TOM1L1-221ENST00000575882 UPK1BO75841 260 aa16.67■□□□□ 0.26
TOM1L1-221ENST00000575882 MYO1DO94832 1006 aa16.67■□□□□ 0.26
TOM1L1-221ENST00000575882 TAF12Q16514 161 aa16.67■□□□□ 0.26
TOM1L1-221ENST00000575882 ZNF404Q494X3 552 aa16.67■□□□□ 0.26
TOM1L1-221ENST00000575882 SLC8B1Q6J4K2 584 aa16.67■□□□□ 0.26
TOM1L1-221ENST00000575882 GPR155Q7Z3F1 870 aa16.67■□□□□ 0.26
TOM1L1-221ENST00000575882 CBARPQ8N350 705 aaPredicted RBP16.67■□□□□ 0.26
TOM1L1-221ENST00000575882 KIAA1958Q8N8K9 716 aa16.67■□□□□ 0.26
TOM1L1-221ENST00000575882 HRASLS5Q96KN8 279 aa16.67■□□□□ 0.26
TOM1L1-221ENST00000575882 COPS8Q99627 209 aa16.67■□□□□ 0.26
TOM1L1-221ENST00000575882 KIAA1522Q9P206 1035 aaPredicted RBP16.67■□□□□ 0.26
TOM1L1-221ENST00000575882 PABPN1LA6NDY0 278 aaKnown RBP16.67■□□□□ 0.26
TOM1L1-221ENST00000575882 AGAP14A8MT82 685 aa16.67■□□□□ 0.26
TOM1L1-221ENST00000575882 VIPP01282 170 aa16.67■□□□□ 0.26
TOM1L1-221ENST00000575882 PRKAR2AP13861 404 aaKnown RBP16.67■□□□□ 0.26
TOM1L1-221ENST00000575882 ACPPP15309 386 aa16.67■□□□□ 0.26
TOM1L1-221ENST00000575882 C21orf33P30042 268 aaPredicted RBP16.67■□□□□ 0.26
TOM1L1-221ENST00000575882 ZXDBP98169 803 aa16.67■□□□□ 0.26
TOM1L1-221ENST00000575882 PRKCZQ05513 592 aa16.67■□□□□ 0.26
TOM1L1-221ENST00000575882 IQCCQ4KMZ1 466 aa16.67■□□□□ 0.26
TOM1L1-221ENST00000575882 COLEC12Q5KU26 742 aa16.67■□□□□ 0.26
TOM1L1-221ENST00000575882 RETSATQ6NUM9 610 aa16.67■□□□□ 0.26
TOM1L1-221ENST00000575882 LYSMD2Q8IV50 215 aa16.67■□□□□ 0.26
TOM1L1-221ENST00000575882 FCGR1BQ92637 280 aa16.67■□□□□ 0.26
TOM1L1-221ENST00000575882 PROX1Q92786 737 aa16.67■□□□□ 0.26
TOM1L1-221ENST00000575882 KCNC2Q96PR1 638 aa16.67■□□□□ 0.26
TOM1L1-221ENST00000575882 C2orf49Q9BVC5 232 aaPredicted RBP16.67■□□□□ 0.26
TOM1L1-221ENST00000575882 PRDM8Q9NQV8 689 aa16.67■□□□□ 0.26
TOM1L1-221ENST00000575882 E9PQ18 207 aa16.66■□□□□ 0.26
TOM1L1-221ENST00000575882 YY2O15391 372 aa16.66■□□□□ 0.26
TOM1L1-221ENST00000575882 SOCS5O75159 536 aa16.66■□□□□ 0.26
TOM1L1-221ENST00000575882 C8GP07360 202 aa16.66■□□□□ 0.26
TOM1L1-221ENST00000575882 NUDT7P0C024 238 aa16.66■□□□□ 0.26
TOM1L1-221ENST00000575882 PCSK2P16519 638 aa16.66■□□□□ 0.26
TOM1L1-221ENST00000575882 TUBA1BP68363 451 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms