RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, human

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-212	ENST00000575116	DPYSL5	Q9BPU6	564 aa		11.45	□□□□□ -0.58
PRPF8-212	ENST00000575116	PLCD4	Q9BRC7	762 aa		11.45	□□□□□ -0.58
PRPF8-212	ENST00000575116	EDEM2	Q9BV94	578 aa		11.45	□□□□□ -0.58
PRPF8-212	ENST00000575116	FAM107B	Q9H098	131 aa		11.45	□□□□□ -0.58
PRPF8-212	ENST00000575116	MEAF6	Q9HAF1	191 aa		11.45	□□□□□ -0.58
PRPF8-212	ENST00000575116	KCNK13	Q9HB14	408 aa		11.45	□□□□□ -0.58
PRPF8-212	ENST00000575116	NPHS2	Q9NP85	383 aa		11.45	□□□□□ -0.58
PRPF8-212	ENST00000575116	GEMIN8	Q9NWZ8	242 aa	Known RBP	11.45	□□□□□ -0.58
PRPF8-212	ENST00000575116	MARCO	Q9UEW3	520 aa	Predicted RBP	11.45	□□□□□ -0.58
PRPF8-212	ENST00000575116	POMT2	Q9UKY4	750 aa		11.45	□□□□□ -0.58
PRPF8-212	ENST00000575116	SH2B3	Q9UQQ2	575 aa		11.45	□□□□□ -0.58
PRPF8-212	ENST00000575116	APOBEC2	Q9Y235	224 aa	Known RBP	11.45	□□□□□ -0.58
PRPF8-212	ENST00000575116	TIMM22	Q9Y584	194 aa		11.45	□□□□□ -0.58
PRPF8-212	ENST00000575116	COL5A1	P20908	1838 aa	Predicted RBP	11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	IGKV1-8	A0A0C4DH67	115 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	TRBC2	A0A5B9	178 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	OR2A25	A4D2G3	310 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	TMEM233	B4DJY2	109 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116		H7BY64	318 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	FOXE1	O00358	373 aa	Predicted RBP	11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	MANBA	O00462	879 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	DUX1	O43812	170 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	VPS4B	O75351	444 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	CD59	P13987	128 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	CKMT2	P17540	419 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	TGM1	P22735	817 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	VARS	P26640	1264 aa	Known RBP	11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	CD1C	P29017	333 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	PIK3CB	P42338	1070 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	OR1D5	P58170	312 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	CSNK1G2	P78368	415 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	DAB2	P98082	770 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	REEP5	Q00765	189 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	BTK	Q06187	659 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	IFT88	Q13099	833 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	SLBP	Q14493	270 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	GKAP1	Q5VSY0	366 aa	Predicted RBP	11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	FRG2	Q64ET8	278 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	FIGLA	Q6QHK4	219 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	TMIGD1	Q6UXZ0	262 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	PRR23C	Q6ZRP0	262 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	TRIM46	Q7Z4K8	759 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	SPRED1	Q7Z699	444 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	PLXDC1	Q8IUK5	500 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	DCBLD1	Q8N8Z6	715 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	TTL	Q8NG68	377 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	OR7G3	Q8NG95	312 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	RFWD2	Q8NHY2	731 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	WDR20	Q8TBZ3	569 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	RHBDD1	Q8TEB9	315 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	ZNF473	Q8WTR7	871 aa	Known RBP	11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	CCT6B	Q92526	530 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	USP7	Q93009	1102 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	CCDC74A	Q96AQ1	378 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	PRAP1	Q96NZ9	151 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	FRG2B	Q96QU4	278 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	KCNA7	Q96RP8	456 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	DPH7	Q9BTV6	452 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	ABCG4	Q9H172	646 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	SEMA6C	Q9H3T2	930 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	ELOVL6	Q9H5J4	265 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	SLC6A20	Q9NP91	592 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	C1GALT1	Q9NS00	363 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	FAM86C1	Q9NVL1	165 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	CUEDC1	Q9NWM3	386 aa	Predicted RBP	11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	ZNF490	Q9ULM2	529 aa	Predicted RBP	11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	PPT2	Q9UMR5	302 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	FIS1	Q9Y3D6	152 aa		11.44	□□□□□ -0.58
PRPF8-212	ENST00000575116	ARID1B	Q8NFD5	2236 aa	Predicted RBP	11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	CPED1	A4D0V7	1026 aa		11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	SLC28A1	O00337	649 aa		11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	NDUFAB1	O14561	156 aa		11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	FFAR3	O14843	346 aa		11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	TOX3	O15405	576 aa	Predicted RBP	11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	CAPN5	O15484	640 aa	Predicted RBP	11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	GPR42	O15529	346 aa		11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	C9	P02748	559 aa		11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	GP1BA	P07359	652 aa		11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	HSD3B1	P14060	373 aa		11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	EZR	P15311	586 aa	Known RBP	11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	ACP1	P24666	158 aa		11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	HSD3B2	P26439	372 aa		11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	SERPINB3	P29508	390 aa		11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	AHR	P35869	848 aa		11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	IDH3A	P50213	366 aa		11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	ARFIP2	P53365	341 aa		11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	AQP5	P55064	265 aa		11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	YBX1	P67809	324 aa	Known RBP	11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	PHEX	P78562	749 aa		11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	CSTF3	Q12996	717 aa	Known RBP	11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	PDCD2	Q16342	344 aa	Predicted RBP	11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	AASDH	Q4L235	1098 aa	Predicted RBP	11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	GUSBP11	Q6P575	273 aa		11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	PAQR7	Q86WK9	346 aa		11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	GBP7	Q8N8V2	638 aa	Predicted RBP	11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	ANKS4B	Q8N8V4	417 aa		11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	BAHD1	Q8TBE0	780 aa	Predicted RBP	11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	ACTRT2	Q8TDY3	377 aa		11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	C10orf82	Q8WW14	230 aa		11.43	□□□□□ -0.58
PRPF8-212	ENST00000575116	SELENOM	Q8WWX9	145 aa		11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms