RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 WDR36Q8NI36 951 aaKnown RBP16.4■□□□□ 0.22
NUP88-210ENST00000574867 WDR34Q96EX3 536 aa16.4■□□□□ 0.22
NUP88-210ENST00000574867 PTCD3Q96EY7 689 aaKnown RBP16.4■□□□□ 0.22
NUP88-210ENST00000574867 EFCAB11Q9BUY7 163 aa16.4■□□□□ 0.22
NUP88-210ENST00000574867 IPPKQ9H8X2 491 aa16.4■□□□□ 0.22
NUP88-210ENST00000574867 FANCEQ9HB96 536 aa16.4■□□□□ 0.22
NUP88-210ENST00000574867 SPTBN4Q9H254 2564 aa16.4■□□□□ 0.22
NUP88-210ENST00000574867 UGDHO60701 494 aa16.39■□□□□ 0.21
NUP88-210ENST00000574867 C1GALT1C1LP0DN25 315 aa16.39■□□□□ 0.21
NUP88-210ENST00000574867 CXCR2P25025 360 aa16.39■□□□□ 0.21
NUP88-210ENST00000574867 E2F2Q14209 437 aa16.39■□□□□ 0.21
NUP88-210ENST00000574867 UNC50Q53HI1 259 aa16.39■□□□□ 0.21
NUP88-210ENST00000574867 CFAP157Q5JU67 520 aa16.39■□□□□ 0.21
NUP88-210ENST00000574867 CATSPEREQ5SY80 951 aa16.39■□□□□ 0.21
NUP88-210ENST00000574867 HHATQ5VTY9 493 aa16.39■□□□□ 0.21
NUP88-210ENST00000574867 ZFYVE21Q9BQ24 234 aa16.39■□□□□ 0.21
NUP88-210ENST00000574867 AIF1LQ9BQI0 150 aa16.39■□□□□ 0.21
NUP88-210ENST00000574867 PITHD1Q9GZP4 211 aaPredicted RBP16.39■□□□□ 0.21
NUP88-210ENST00000574867 B4E171 279 aa16.39■□□□□ 0.21
NUP88-210ENST00000574867 H2AFYO75367 372 aaKnown RBP16.39■□□□□ 0.21
NUP88-210ENST00000574867 MLYCDO95822 493 aa16.39■□□□□ 0.21
NUP88-210ENST00000574867 EBLN1P0CF75 366 aa16.39■□□□□ 0.21
NUP88-210ENST00000574867 TSPAN7P41732 249 aa16.39■□□□□ 0.21
NUP88-210ENST00000574867 CASP2P42575 452 aa16.39■□□□□ 0.21
NUP88-210ENST00000574867 NAGLUP54802 743 aa16.39■□□□□ 0.21
NUP88-210ENST00000574867 RPS15AP62244 130 aaKnown RBP16.39■□□□□ 0.21
NUP88-210ENST00000574867 REEP5Q00765 189 aa16.39■□□□□ 0.21
NUP88-210ENST00000574867 IRF8Q02556 426 aa16.39■□□□□ 0.21
NUP88-210ENST00000574867 FOXC1Q12948 553 aa16.39■□□□□ 0.21
NUP88-210ENST00000574867 CHIT1Q13231 466 aa16.39■□□□□ 0.21
NUP88-210ENST00000574867 XKR6Q5GH73 641 aa16.39■□□□□ 0.21
NUP88-210ENST00000574867 PAGE2BQ5JRK9 111 aa16.39■□□□□ 0.21
NUP88-210ENST00000574867 FRMD7Q6ZUT3 714 aa16.39■□□□□ 0.21
NUP88-210ENST00000574867 FAM129CQ86XR2 697 aa16.39■□□□□ 0.21
NUP88-210ENST00000574867 DNAJC22Q8N4W6 341 aa16.39■□□□□ 0.21
NUP88-210ENST00000574867 CCNYL1Q8N7R7 359 aa16.39■□□□□ 0.21
NUP88-210ENST00000574867 MAGEB10Q96LZ2 347 aaPredicted RBP16.39■□□□□ 0.21
NUP88-210ENST00000574867 NSUN5Q96P11 429 aaKnown RBP16.39■□□□□ 0.21
NUP88-210ENST00000574867 MECRQ9BV79 373 aa16.39■□□□□ 0.21
NUP88-210ENST00000574867 SARGQ9BW04 601 aa16.39■□□□□ 0.21
NUP88-210ENST00000574867 NOL11Q9H8H0 719 aaKnown RBP16.39■□□□□ 0.21
NUP88-210ENST00000574867 ZBTB26Q9HCK0 441 aa16.39■□□□□ 0.21
NUP88-210ENST00000574867 FAM60AQ9NP50 221 aa16.39■□□□□ 0.21
NUP88-210ENST00000574867 SEMA4BQ9NPR2 832 aaPredicted RBP16.39■□□□□ 0.21
NUP88-210ENST00000574867 PILRAQ9UKJ1 303 aa16.39■□□□□ 0.21
NUP88-210ENST00000574867 SPEGQ15772 3267 aa16.38■□□□□ 0.21
NUP88-210ENST00000574867 FAM149AA5PLN7 773 aa16.38■□□□□ 0.21
NUP88-210ENST00000574867 EFCAB7A8K855 629 aa16.38■□□□□ 0.21
NUP88-210ENST00000574867 HAT1O14929 419 aa16.38■□□□□ 0.21
NUP88-210ENST00000574867 PLD2O14939 933 aa16.38■□□□□ 0.21
NUP88-210ENST00000574867 OTCP00480 354 aa16.38■□□□□ 0.21
NUP88-210ENST00000574867 CCNG1P51959 295 aa16.38■□□□□ 0.21
NUP88-210ENST00000574867 PPP2R2AP63151 447 aa16.38■□□□□ 0.21
NUP88-210ENST00000574867 CLCQ05315 142 aa16.38■□□□□ 0.21
NUP88-210ENST00000574867 LCP2Q13094 533 aa16.38■□□□□ 0.21
NUP88-210ENST00000574867 TUBB3Q13509 450 aa16.38■□□□□ 0.21
NUP88-210ENST00000574867 LAPTM5Q13571 262 aa16.38■□□□□ 0.21
NUP88-210ENST00000574867 KRT78Q8N1N4 520 aa16.38■□□□□ 0.21
NUP88-210ENST00000574867 BMPERQ8N8U9 685 aa16.38■□□□□ 0.21
NUP88-210ENST00000574867 ATP6V1E2Q96A05 226 aa16.38■□□□□ 0.21
NUP88-210ENST00000574867 THAP11Q96EK4 314 aa16.38■□□□□ 0.21
NUP88-210ENST00000574867 TRMOQ9BU70 441 aa16.38■□□□□ 0.21
NUP88-210ENST00000574867 NTMT1Q9BV86 223 aa16.38■□□□□ 0.21
NUP88-210ENST00000574867 GSTO2Q9H4Y5 243 aa16.38■□□□□ 0.21
NUP88-210ENST00000574867 ACTR8Q9H981 624 aa16.38■□□□□ 0.21
NUP88-210ENST00000574867 PLCL2Q9UPR0 1127 aa16.38■□□□□ 0.21
NUP88-210ENST00000574867 TRBC2A0A5B9 178 aa16.38■□□□□ 0.21
NUP88-210ENST00000574867 HYAL3O43820 417 aaPredicted RBP16.38■□□□□ 0.21
NUP88-210ENST00000574867 PRAMEF10O60809 474 aa16.38■□□□□ 0.21
NUP88-210ENST00000574867 CTSVO60911 334 aa16.38■□□□□ 0.21
NUP88-210ENST00000574867 JMJD7P0C870 316 aa16.38■□□□□ 0.21
NUP88-210ENST00000574867 FOLR1P15328 257 aa16.38■□□□□ 0.21
NUP88-210ENST00000574867 RAB15P59190 212 aa16.38■□□□□ 0.21
NUP88-210ENST00000574867 DOC2AQ14183 400 aa16.38■□□□□ 0.21
NUP88-210ENST00000574867 KCNAB1Q14722 419 aa16.38■□□□□ 0.21
NUP88-210ENST00000574867 RBBP7Q16576 425 aa16.38■□□□□ 0.21
NUP88-210ENST00000574867 LIPJQ5W064 366 aa16.38■□□□□ 0.21
NUP88-210ENST00000574867 BPHLQ86WA6 291 aaPredicted RBP16.38■□□□□ 0.21
NUP88-210ENST00000574867 NUDCD3Q8IVD9 361 aa16.38■□□□□ 0.21
NUP88-210ENST00000574867 OR8K5Q8NH50 307 aa16.38■□□□□ 0.21
NUP88-210ENST00000574867 N4BP2L2Q92802 583 aaPredicted RBP16.38■□□□□ 0.21
NUP88-210ENST00000574867 ZNF382Q96SR6 550 aa16.38■□□□□ 0.21
NUP88-210ENST00000574867 FGF21Q9NSA1 209 aa16.38■□□□□ 0.21
NUP88-210ENST00000574867 H3BQF6 201 aa16.37■□□□□ 0.21
NUP88-210ENST00000574867 OR7A17O14581 309 aa16.37■□□□□ 0.21
NUP88-210ENST00000574867 NRP2O60462 931 aa16.37■□□□□ 0.21
NUP88-210ENST00000574867 WFS1O76024 890 aa16.37■□□□□ 0.21
NUP88-210ENST00000574867 NR1D1P20393 614 aa16.37■□□□□ 0.21
NUP88-210ENST00000574867 VARSP26640 1264 aaKnown RBP16.37■□□□□ 0.21
NUP88-210ENST00000574867 SERPINB5P36952 375 aa16.37■□□□□ 0.21
NUP88-210ENST00000574867 ARL1P40616 181 aaPredicted RBP16.37■□□□□ 0.21
NUP88-210ENST00000574867 HNF4AP41235 474 aa16.37■□□□□ 0.21
NUP88-210ENST00000574867 GABRA4P48169 554 aa16.37■□□□□ 0.21
NUP88-210ENST00000574867 CDH13P55290 713 aa16.37■□□□□ 0.21
NUP88-210ENST00000574867 WDR4P57081 412 aaKnown RBP16.37■□□□□ 0.21
NUP88-210ENST00000574867 SH3BP2P78314 561 aa16.37■□□□□ 0.21
NUP88-210ENST00000574867 MC2RQ01718 297 aa16.37■□□□□ 0.21
NUP88-210ENST00000574867 TRAF3Q13114 568 aa16.37■□□□□ 0.21
NUP88-210ENST00000574867 SLBPQ14493 270 aaKnown RBP eCLIP16.37■□□□□ 0.21
NUP88-210ENST00000574867 IL11RAQ14626 422 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms