RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 CMC1Q7Z7K0 106 aa10.2□□□□□ -0.78
LITAF-216ENST00000574848 SYVN1Q86TM6 617 aa10.2□□□□□ -0.78
LITAF-216ENST00000574848 CILP2Q8IUL8 1156 aa10.2□□□□□ -0.78
LITAF-216ENST00000574848 VRK3Q8IV63 474 aa10.2□□□□□ -0.78
LITAF-216ENST00000574848 DCUN1D3Q8IWE4 304 aa10.2□□□□□ -0.78
LITAF-216ENST00000574848 DSELQ8IZU8 1212 aa10.2□□□□□ -0.78
LITAF-216ENST00000574848 C19orf47Q8N9M1 422 aaKnown RBP10.2□□□□□ -0.78
LITAF-216ENST00000574848 SLC38A9Q8NBW4 561 aa10.2□□□□□ -0.78
LITAF-216ENST00000574848 OR1L3Q8NH93 324 aa10.2□□□□□ -0.78
LITAF-216ENST00000574848 FAM45AQ8TCE6 357 aa10.2□□□□□ -0.78
LITAF-216ENST00000574848 ASZ1Q8WWH4 475 aa10.2□□□□□ -0.78
LITAF-216ENST00000574848 CCT6BQ92526 530 aa10.2□□□□□ -0.78
LITAF-216ENST00000574848 PANX3Q96QZ0 392 aa10.2□□□□□ -0.78
LITAF-216ENST00000574848 OR2A14Q96R47 310 aa10.2□□□□□ -0.78
LITAF-216ENST00000574848 TCF12Q99081 682 aa10.2□□□□□ -0.78
LITAF-216ENST00000574848 ACTL8Q9H568 366 aa10.2□□□□□ -0.78
LITAF-216ENST00000574848 XKR8Q9H6D3 395 aa10.2□□□□□ -0.78
LITAF-216ENST00000574848 NMRAL1Q9HBL8 299 aa10.2□□□□□ -0.78
LITAF-216ENST00000574848 INTS10Q9NVR2 710 aaKnown RBP10.2□□□□□ -0.78
LITAF-216ENST00000574848 THAP1Q9NVV9 213 aa10.2□□□□□ -0.78
LITAF-216ENST00000574848 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.2□□□□□ -0.78
LITAF-216ENST00000574848 COPG2Q9UBF2 871 aa10.2□□□□□ -0.78
LITAF-216ENST00000574848 GNPTGQ9UJJ9 305 aa10.2□□□□□ -0.78
LITAF-216ENST00000574848 POLHQ9Y253 713 aa10.2□□□□□ -0.78
LITAF-216ENST00000574848 KCNMB2Q9Y691 235 aa10.2□□□□□ -0.78
LITAF-216ENST00000574848 A0A0J9YY10 115 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 TMEM114B3SHH9 223 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 TMEM150CB9EJG8 249 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 SLC28A2O43868 658 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 ATP5HO75947 161 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 NTRK1P04629 796 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 RPN2P04844 631 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 FURINP09958 794 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 RAB40ALP0C0E4 278 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 MYL2P10916 166 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 PVRP15151 417 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 PTPN4P29074 926 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 PEBP1P30086 187 aaKnown RBP10.19□□□□□ -0.78
LITAF-216ENST00000574848 RAB28P51157 221 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 HK2P52789 917 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 ITGA1P56199 1179 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 HSPA14Q0VDF9 509 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 CTBP1Q13363 440 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 GRB7Q14451 532 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 GBX1Q14549 363 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 KIR2DS3Q14952 304 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 FAM83EQ2M2I3 478 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 DEFB109BQ30KR1 87 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 PLEKHS1Q5SXH7 462 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 ZNF385CQ66K41 422 aaPredicted RBP10.19□□□□□ -0.78
LITAF-216ENST00000574848 FAM198BQ6UWH4 519 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 NAPRTQ6XQN6 538 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 LDB1Q86U70 411 aaPredicted RBP10.19□□□□□ -0.78
LITAF-216ENST00000574848 APLFQ8IW19 511 aaPredicted RBP10.19□□□□□ -0.78
LITAF-216ENST00000574848 WDR75Q8IWA0 830 aaKnown RBP10.19□□□□□ -0.78
LITAF-216ENST00000574848 DENND6AQ8IWF6 608 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 KIRREL3Q8IZU9 778 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 GPATCH11Q8N954 259 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 C9orf43Q8TAL5 461 aaPredicted RBP10.19□□□□□ -0.78
LITAF-216ENST00000574848 LPGAT1Q92604 370 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 CCDC126Q96EE4 140 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 RNF31Q96EP0 1072 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 TCTN2Q96GX1 697 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 BIRC8Q96P09 236 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 LRRC37BQ96QE4 947 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 DPH2Q9BQC3 489 aaPredicted RBP10.19□□□□□ -0.78
LITAF-216ENST00000574848 CCDC68Q9H2F9 335 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 AKIRIN1Q9H9L7 192 aaPredicted RBP10.19□□□□□ -0.78
LITAF-216ENST00000574848 POPDC3Q9HBV1 291 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 NPHS2Q9NP85 383 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 SLCO1B3Q9NPD5 702 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 ENAMQ9NRM1 1142 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 SPHK1Q9NYA1 384 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 HEMK1Q9Y5R4 338 aaPredicted RBP10.19□□□□□ -0.78
LITAF-216ENST00000574848 SNRNP200O75643 2136 aaKnown RBP10.19□□□□□ -0.78
LITAF-216ENST00000574848 FER1L5A0AVI2 2057 aa10.19□□□□□ -0.78
LITAF-216ENST00000574848 UBR5O95071 2799 aaPredicted RBP10.19□□□□□ -0.78
LITAF-216ENST00000574848 IQCF5A8MTL0 148 aa10.18□□□□□ -0.78
LITAF-216ENST00000574848 E7EQ34 232 aa10.18□□□□□ -0.78
LITAF-216ENST00000574848 MEN1O00255 615 aa10.18□□□□□ -0.78
LITAF-216ENST00000574848 KPNA5O15131 536 aa10.18□□□□□ -0.78
LITAF-216ENST00000574848 MAP3K7O43318 606 aa10.18□□□□□ -0.78
LITAF-216ENST00000574848 HNRNPCL1O60812 293 aaKnown RBP10.18□□□□□ -0.78
LITAF-216ENST00000574848 KLHL2O95198 593 aa10.18□□□□□ -0.78
LITAF-216ENST00000574848 CAPN1P07384 714 aa10.18□□□□□ -0.78
LITAF-216ENST00000574848 HBQ1P09105 142 aa10.18□□□□□ -0.78
LITAF-216ENST00000574848 CYP2A7P20853 494 aa10.18□□□□□ -0.78
LITAF-216ENST00000574848 SAT1P21673 171 aa10.18□□□□□ -0.78
LITAF-216ENST00000574848 ARFIP2P53365 341 aa10.18□□□□□ -0.78
LITAF-216ENST00000574848 MPP1Q00013 466 aa10.18□□□□□ -0.78
LITAF-216ENST00000574848 BST1Q10588 318 aa10.18□□□□□ -0.78
LITAF-216ENST00000574848 IL10RAQ13651 578 aa10.18□□□□□ -0.78
LITAF-216ENST00000574848 ERV3-1Q14264 604 aa10.18□□□□□ -0.78
LITAF-216ENST00000574848 PCLAFQ15004 111 aa10.18□□□□□ -0.78
LITAF-216ENST00000574848 ZIC1Q15915 447 aa10.18□□□□□ -0.78
LITAF-216ENST00000574848 CTSL3PQ5NE16 218 aa10.18□□□□□ -0.78
LITAF-216ENST00000574848 CGB2Q6NT52 195 aa10.18□□□□□ -0.78
LITAF-216ENST00000574848 C16orf46Q6P387 395 aa10.18□□□□□ -0.78
LITAF-216ENST00000574848 FAM199XQ6PEV8 388 aaPredicted RBP10.18□□□□□ -0.78
LITAF-216ENST00000574848 ATG14Q6ZNE5 492 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms