RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 KDELR2P33947 212 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 CCR2P41597 374 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 ARHGDIAP52565 204 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 CASP9P55211 416 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 LSM3P62310 102 aaKnown RBP10.86□□□□□ -0.67
RPAIN-212ENST00000573126 SP140Q13342 867 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 DOC2AQ14183 400 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 TRIM60Q495X7 471 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 PLEKHS1Q5SXH7 462 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 THOC6Q86W42 341 aaKnown RBP10.86□□□□□ -0.67
RPAIN-212ENST00000573126 EGFL6Q8IUX8 553 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 ASZ1Q8WWH4 475 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 MAL2Q969L2 176 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 UBE2FQ969M7 185 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 ZNF641Q96N77 438 aaPredicted RBP10.86□□□□□ -0.67
RPAIN-212ENST00000573126 CPEB1Q9BZB8 566 aaKnown RBP10.86□□□□□ -0.67
RPAIN-212ENST00000573126 RASSF1Q9NS23 344 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 COL4A6Q14031 1691 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 MICAL3Q7RTP6 2002 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 CFAP99D6REC4 459 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 TOR1BO14657 336 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 GRM6O15303 877 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 TSPAN6O43657 245 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 NDUFS2O75306 463 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 C8AP07357 584 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 CCDC159P0C7I6 412 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 MPC1LP0DKB6 136 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 ITIH1P19827 911 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 GSSP48637 474 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 CLK3P49761 638 aaKnown RBP10.86□□□□□ -0.67
RPAIN-212ENST00000573126 SRSF11Q05519 484 aaKnown RBP10.86□□□□□ -0.67
RPAIN-212ENST00000573126 TOP3AQ13472 1001 aaPredicted RBP10.86□□□□□ -0.67
RPAIN-212ENST00000573126 NR1D2Q14995 579 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 CTF1Q16619 201 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 PDE12Q6L8Q7 609 aaKnown RBP10.86□□□□□ -0.67
RPAIN-212ENST00000573126 GDPD4Q6W3E5 623 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 BTLAQ7Z6A9 289 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 ATG16L2Q8NAA4 619 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 GPR156Q8NFN8 814 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 FAR1Q8WVX9 515 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 ZNF689Q96CS4 500 aaPredicted RBP10.86□□□□□ -0.67
RPAIN-212ENST00000573126 RIOK2Q9BVS4 552 aaKnown RBP10.86□□□□□ -0.67
RPAIN-212ENST00000573126 TPT1P8Q9HAU6 139 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 KIF17Q9P2E2 1029 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 ENPP5Q9UJA9 477 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 DOLKQ9UPQ8 538 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 GMPPBQ9Y5P6 360 aa10.86□□□□□ -0.67
RPAIN-212ENST00000573126 FADS2P1A8MWK0 482 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 ZNF99A8MXY4 864 aaPredicted RBP10.85□□□□□ -0.67
RPAIN-212ENST00000573126 CCL16O15467 120 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 LEFTY1O75610 366 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 SLC16A8O95907 504 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 ABCB1P08183 1280 aaPredicted RBP10.85□□□□□ -0.67
RPAIN-212ENST00000573126 ITGAMP11215 1152 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 PABPC1P11940 636 aaKnown RBP10.85□□□□□ -0.67
RPAIN-212ENST00000573126 GPX2P18283 190 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 BDKRB1P46663 353 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 TRPC1P48995 793 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 CTSCP53634 463 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 PHEXP78562 749 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 HKDC1Q2TB90 917 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 ZC3H12BQ5HYM0 836 aaKnown RBP10.85□□□□□ -0.67
RPAIN-212ENST00000573126 ZDHHC20Q5W0Z9 365 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 KDM4DQ6B0I6 523 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 C1orf52Q8N6N3 182 aaKnown RBP10.85□□□□□ -0.67
RPAIN-212ENST00000573126 ABHD11Q8NFV4 315 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 WDR20Q8TBZ3 569 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 CYB5D2Q8WUJ1 264 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 OR4K3Q96R72 315 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 EMILIN2Q9BXX0 1053 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 TM9SF3Q9HD45 589 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 NAALAD2Q9Y3Q0 740 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 PLXNB3Q9ULL4 1909 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 CHD7Q9P2D1 2997 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 MYO7AQ13402 2215 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 UGT2B11O75310 529 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 PBLDP30039 288 aaPredicted RBP10.85□□□□□ -0.67
RPAIN-212ENST00000573126 WEE1P30291 646 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 DNAJA1P31689 397 aaKnown RBP10.85□□□□□ -0.67
RPAIN-212ENST00000573126 OPRL1P41146 370 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 RECQLP46063 649 aaPredicted RBP10.85□□□□□ -0.67
RPAIN-212ENST00000573126 POLR2LP62875 67 aaKnown RBP10.85□□□□□ -0.67
RPAIN-212ENST00000573126 IL18R1Q13478 541 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 TSTA3Q13630 321 aaPredicted RBP10.85□□□□□ -0.67
RPAIN-212ENST00000573126 NPTX1Q15818 432 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 SYTL3Q4VX76 610 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 CNKSR3Q6P9H4 555 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 AGTRAPQ6RW13 159 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 ANGPTL8Q6UXH0 198 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 ZNF554Q86TJ5 538 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 ZNF366Q8N895 744 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 LMNTD1Q8N9Z9 388 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 TTC29Q8NA56 475 aaPredicted RBP10.85□□□□□ -0.67
RPAIN-212ENST00000573126 DUSP26Q9BV47 211 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 SGK2Q9HBY8 427 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 SIRT5Q9NXA8 310 aa10.85□□□□□ -0.67
RPAIN-212ENST00000573126 UNC80Q8N2C7 3258 aa10.84□□□□□ -0.67
RPAIN-212ENST00000573126 GABRR3A8MPY1 467 aa10.84□□□□□ -0.67
RPAIN-212ENST00000573126 NPIPB8E9PQR5 432 aa10.84□□□□□ -0.67
RPAIN-212ENST00000573126 BOLA2-SMG1P6H3BVE0 249 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms