RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 DNAJC21Q5F1R6 531 aaKnown RBP9.84□□□□□ -0.83
CTDNEP1-202ENST00000570380 ALKBH5Q6P6C2 394 aaKnown RBP9.84□□□□□ -0.83
CTDNEP1-202ENST00000570380 ARSKQ6UWY0 536 aa9.84□□□□□ -0.83
CTDNEP1-202ENST00000570380 PAMR1Q6UXH9 720 aa9.84□□□□□ -0.83
CTDNEP1-202ENST00000570380 ZNF227Q86WZ6 799 aa9.84□□□□□ -0.83
CTDNEP1-202ENST00000570380 VRK3Q8IV63 474 aa9.84□□□□□ -0.83
CTDNEP1-202ENST00000570380 SLC22A15Q8IZD6 547 aa9.84□□□□□ -0.83
CTDNEP1-202ENST00000570380 SHISA5Q8N114 240 aa9.84□□□□□ -0.83
CTDNEP1-202ENST00000570380 HORMAD2Q8N7B1 307 aa9.84□□□□□ -0.83
CTDNEP1-202ENST00000570380 OR2L3Q8NG85 312 aa9.84□□□□□ -0.83
CTDNEP1-202ENST00000570380 GOT1L1Q8NHS2 421 aaPredicted RBP9.84□□□□□ -0.83
CTDNEP1-202ENST00000570380 CFAP61Q8NHU2 1237 aa9.84□□□□□ -0.83
CTDNEP1-202ENST00000570380 METTL21AQ8WXB1 218 aa9.84□□□□□ -0.83
CTDNEP1-202ENST00000570380 CYTH2Q99418 400 aa9.84□□□□□ -0.83
CTDNEP1-202ENST00000570380 VAT1Q99536 393 aa9.84□□□□□ -0.83
CTDNEP1-202ENST00000570380 MIPEPQ99797 713 aa9.84□□□□□ -0.83
CTDNEP1-202ENST00000570380 VN1R1Q9GZP7 353 aa9.84□□□□□ -0.83
CTDNEP1-202ENST00000570380 IMPACTQ9P2X3 320 aa9.84□□□□□ -0.83
CTDNEP1-202ENST00000570380 USP27XA6NNY8 438 aa9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 H7C0S8 307 aa9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 QSOX1O00391 747 aa9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 CDC40O60508 579 aaKnown RBP eCLIP9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 SLC25A12O75746 678 aa9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 ANXA9O76027 345 aa9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 ATE1O95260 518 aa9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 KRT1P04264 644 aa9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 ANXA5P08758 320 aa9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 TFEBP19484 476 aa9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 RFC3P40938 356 aa9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 NR0B1P51843 470 aaKnown RBP9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 TYRO3Q06418 890 aa9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 MESDQ14696 234 aa9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 NFKBIBQ15653 356 aa9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 HKDC1Q2TB90 917 aa9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 CMPK2Q5EBM0 449 aa9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 FIGNQ5HY92 759 aa9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 DENND5AQ6IQ26 1287 aa9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 LRRC8BQ6P9F7 803 aa9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 MFSD7Q6UXD7 560 aa9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 UNC5DQ6UXZ4 953 aa9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 ACAD11Q709F0 780 aa9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 CHSY3Q70JA7 882 aa9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 BZW1Q7L1Q6 419 aaKnown RBP9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 DCUN1D3Q8IWE4 304 aa9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 ARHGEF39Q8N4T4 335 aa9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 MYRIPQ8NFW9 859 aa9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 OR2A1Q8NGT9 310 aa9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 CDKN2AIPNLQ96HQ2 116 aa9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 ZFYVE21Q9BQ24 234 aa9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 PLSCR2Q9NRY7 297 aa9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 UVRAGQ9P2Y5 699 aa9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 ADAM21Q9UKJ8 722 aa9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 SLC39A10Q9ULF5 831 aa9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 MXRA5Q9NR99 2828 aa9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 ZANQ9Y493 2812 aa9.83□□□□□ -0.84
CTDNEP1-202ENST00000570380 A0A0A6YYC8 382 aaPredicted RBP9.82□□□□□ -0.84
CTDNEP1-202ENST00000570380 A0A0U1RQJ8 604 aa9.82□□□□□ -0.84
CTDNEP1-202ENST00000570380 OR2A25A4D2G3 310 aa9.82□□□□□ -0.84
CTDNEP1-202ENST00000570380 KRT87PA6NCN2 255 aa9.82□□□□□ -0.84
CTDNEP1-202ENST00000570380 OR2W5A6NFC9 320 aa9.82□□□□□ -0.84
CTDNEP1-202ENST00000570380 I3L1I5 382 aaPredicted RBP9.82□□□□□ -0.84
CTDNEP1-202ENST00000570380 TFECO14948 347 aaPredicted RBP9.82□□□□□ -0.84
CTDNEP1-202ENST00000570380 HS6ST1O60243 411 aa9.82□□□□□ -0.84
CTDNEP1-202ENST00000570380 CST8O60676 142 aa9.82□□□□□ -0.84
CTDNEP1-202ENST00000570380 PRMT3O60678 531 aa9.82□□□□□ -0.84
CTDNEP1-202ENST00000570380 RAF1P04049 648 aa9.82□□□□□ -0.84
CTDNEP1-202ENST00000570380 C8BP07358 591 aa9.82□□□□□ -0.84
CTDNEP1-202ENST00000570380 CCR7P32248 378 aa9.82□□□□□ -0.84
CTDNEP1-202ENST00000570380 KIR2DL3P43628 341 aa9.82□□□□□ -0.84
CTDNEP1-202ENST00000570380 SNRPNP63162 240 aaKnown RBP9.82□□□□□ -0.84
CTDNEP1-202ENST00000570380 ITIH4Q14624 930 aa9.82□□□□□ -0.84
CTDNEP1-202ENST00000570380 PACS1Q6VY07 963 aa9.82□□□□□ -0.84
CTDNEP1-202ENST00000570380 ANKRD37Q7Z713 158 aa9.82□□□□□ -0.84
CTDNEP1-202ENST00000570380 LIX1LQ8IVB5 337 aa9.82□□□□□ -0.84
CTDNEP1-202ENST00000570380 CSNK1A1LQ8N752 337 aa9.82□□□□□ -0.84
CTDNEP1-202ENST00000570380 POGLUT1Q8NBL1 392 aa9.82□□□□□ -0.84
CTDNEP1-202ENST00000570380 M1APQ8TC57 530 aa9.82□□□□□ -0.84
CTDNEP1-202ENST00000570380 DPH7Q9BTV6 452 aa9.82□□□□□ -0.84
CTDNEP1-202ENST00000570380 GBA3Q9H227 469 aa9.82□□□□□ -0.84
CTDNEP1-202ENST00000570380 CDCP1Q9H5V8 836 aa9.82□□□□□ -0.84
CTDNEP1-202ENST00000570380 ZNF395Q9H8N7 513 aaPredicted RBP9.82□□□□□ -0.84
CTDNEP1-202ENST00000570380 MMP25Q9NPA2 562 aa9.82□□□□□ -0.84
CTDNEP1-202ENST00000570380 NLE1Q9NVX2 485 aaPredicted RBP9.82□□□□□ -0.84
CTDNEP1-202ENST00000570380 CRIM1Q9NZV1 1036 aa9.82□□□□□ -0.84
CTDNEP1-202ENST00000570380 C19orf25Q9UFG5 118 aaPredicted RBP9.82□□□□□ -0.84
CTDNEP1-202ENST00000570380 TRHDEQ9UKU6 1024 aa9.82□□□□□ -0.84
CTDNEP1-202ENST00000570380 NENFQ9UMX5 172 aa9.82□□□□□ -0.84
CTDNEP1-202ENST00000570380 ALG6Q9Y672 507 aa9.82□□□□□ -0.84
CTDNEP1-202ENST00000570380 BZW2Q9Y6E2 419 aaKnown RBP9.82□□□□□ -0.84
CTDNEP1-202ENST00000570380 HIVEP2P31629 2446 aa9.82□□□□□ -0.84
CTDNEP1-202ENST00000570380 CHD3Q12873 2000 aaKnown RBP9.82□□□□□ -0.84
CTDNEP1-202ENST00000570380 A0A1W2PPV9 198 aa9.81□□□□□ -0.84
CTDNEP1-202ENST00000570380 SOWAHDA6NJG2 315 aa9.81□□□□□ -0.84
CTDNEP1-202ENST00000570380 A6NNC1 897 aa9.81□□□□□ -0.84
CTDNEP1-202ENST00000570380 FAM171A2A8MVW0 826 aa9.81□□□□□ -0.84
CTDNEP1-202ENST00000570380 GPC4O75487 556 aa9.81□□□□□ -0.84
CTDNEP1-202ENST00000570380 PDE9AO76083 593 aa9.81□□□□□ -0.84
CTDNEP1-202ENST00000570380 RPN2P04844 631 aa9.81□□□□□ -0.84
CTDNEP1-202ENST00000570380 OR56A5P0C7T3 313 aa9.81□□□□□ -0.84
CTDNEP1-202ENST00000570380 CDKN2BP42772 138 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms