RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 PPP1R36Q96LQ0 422 aa14.83□□□□□ -0.03
HERPUD1-219ENST00000570273 PRAP1Q96NZ9 151 aa14.83□□□□□ -0.03
HERPUD1-219ENST00000570273 AIF1LQ9BQI0 150 aa14.83□□□□□ -0.03
HERPUD1-219ENST00000570273 DPH7Q9BTV6 452 aa14.83□□□□□ -0.03
HERPUD1-219ENST00000570273 NUF2Q9BZD4 464 aa14.83□□□□□ -0.03
HERPUD1-219ENST00000570273 EPB41L1Q9H4G0 881 aa14.83□□□□□ -0.03
HERPUD1-219ENST00000570273 ELOVL6Q9H5J4 265 aa14.83□□□□□ -0.03
HERPUD1-219ENST00000570273 PARD6AQ9NPB6 346 aa14.83□□□□□ -0.03
HERPUD1-219ENST00000570273 GEMIN8Q9NWZ8 242 aaKnown RBP14.83□□□□□ -0.03
HERPUD1-219ENST00000570273 KLHL14Q9P2G3 628 aa14.83□□□□□ -0.03
HERPUD1-219ENST00000570273 POMT2Q9UKY4 750 aa14.83□□□□□ -0.03
HERPUD1-219ENST00000570273 SNX6Q9UNH7 406 aa14.83□□□□□ -0.03
HERPUD1-219ENST00000570273 IGHV1OR21-1A0A087WYE8 117 aa14.83□□□□□ -0.04
HERPUD1-219ENST00000570273 A0A0J9YY10 115 aa14.83□□□□□ -0.04
HERPUD1-219ENST00000570273 TRPC5OSA6NMA1 111 aa14.83□□□□□ -0.04
HERPUD1-219ENST00000570273 PIP5K1BO14986 540 aa14.83□□□□□ -0.04
HERPUD1-219ENST00000570273 ZW10O43264 779 aa14.83□□□□□ -0.04
HERPUD1-219ENST00000570273 SNX3O60493 162 aa14.83□□□□□ -0.04
HERPUD1-219ENST00000570273 DIAPH2O60879 1101 aa14.83□□□□□ -0.04
HERPUD1-219ENST00000570273 FKBP9O95302 570 aa14.83□□□□□ -0.04
HERPUD1-219ENST00000570273 JUNP05412 331 aaKnown RBP14.83□□□□□ -0.04
HERPUD1-219ENST00000570273 PCNAP12004 261 aa14.83□□□□□ -0.04
HERPUD1-219ENST00000570273 ALOX15P16050 662 aaPredicted RBP14.83□□□□□ -0.04
HERPUD1-219ENST00000570273 HRH2P25021 359 aa14.83□□□□□ -0.04
HERPUD1-219ENST00000570273 CXCR2P25025 360 aa14.83□□□□□ -0.04
HERPUD1-219ENST00000570273 MEF2AQ02078 507 aaPredicted RBP14.83□□□□□ -0.04
HERPUD1-219ENST00000570273 BTKQ06187 659 aa14.83□□□□□ -0.04
HERPUD1-219ENST00000570273 IFT88Q13099 833 aa14.83□□□□□ -0.04
HERPUD1-219ENST00000570273 E2F2Q14209 437 aa14.83□□□□□ -0.04
HERPUD1-219ENST00000570273 HIST2H2ACQ16777 129 aaPredicted RBP14.83□□□□□ -0.04
HERPUD1-219ENST00000570273 UGT3A2Q3SY77 523 aa14.83□□□□□ -0.04
HERPUD1-219ENST00000570273 AMZ1Q400G9 498 aa14.83□□□□□ -0.04
HERPUD1-219ENST00000570273 SGO1Q5FBB7 561 aa14.83□□□□□ -0.04
HERPUD1-219ENST00000570273 NKAIN2Q5VXU1 208 aa14.83□□□□□ -0.04
HERPUD1-219ENST00000570273 HIST2H2AA3Q6FI13 130 aa14.83□□□□□ -0.04
HERPUD1-219ENST00000570273 MED27Q6P2C8 311 aa14.83□□□□□ -0.04
HERPUD1-219ENST00000570273 SPRED1Q7Z699 444 aa14.83□□□□□ -0.04
HERPUD1-219ENST00000570273 CHCHD4Q8N4Q1 142 aa14.83□□□□□ -0.04
HERPUD1-219ENST00000570273 CCT6BQ92526 530 aa14.83□□□□□ -0.04
HERPUD1-219ENST00000570273 REPS1Q96D71 796 aa14.83□□□□□ -0.04
HERPUD1-219ENST00000570273 C19orf60Q96EN9 201 aa14.83□□□□□ -0.04
HERPUD1-219ENST00000570273 TMEM120AQ9BXJ8 343 aa14.83□□□□□ -0.04
HERPUD1-219ENST00000570273 ABCG4Q9H172 646 aa14.83□□□□□ -0.04
HERPUD1-219ENST00000570273 SPNS1Q9H2V7 528 aa14.83□□□□□ -0.04
HERPUD1-219ENST00000570273 KLHL20Q9Y2M5 609 aa14.83□□□□□ -0.04
HERPUD1-219ENST00000570273 DNAJC15Q9Y5T4 150 aa14.83□□□□□ -0.04
HERPUD1-219ENST00000570273 PIEZO1Q92508 2521 aa14.82□□□□□ -0.04
HERPUD1-219ENST00000570273 IGKV1-8A0A0C4DH67 115 aa14.82□□□□□ -0.04
HERPUD1-219ENST00000570273 EME2A4GXA9 379 aaPredicted RBP14.82□□□□□ -0.04
HERPUD1-219ENST00000570273 CDX4O14627 284 aaPredicted RBP14.82□□□□□ -0.04
HERPUD1-219ENST00000570273 CKMT1AP12532 417 aa14.82□□□□□ -0.04
HERPUD1-219ENST00000570273 PNLIPP16233 465 aa14.82□□□□□ -0.04
HERPUD1-219ENST00000570273 MAGP20916 626 aa14.82□□□□□ -0.04
HERPUD1-219ENST00000570273 ARFIP2P53365 341 aa14.82□□□□□ -0.04
HERPUD1-219ENST00000570273 CSNK1G2P78368 415 aa14.82□□□□□ -0.04
HERPUD1-219ENST00000570273 GPLD1P80108 840 aa14.82□□□□□ -0.04
HERPUD1-219ENST00000570273 SLC14A1Q13336 389 aa14.82□□□□□ -0.04
HERPUD1-219ENST00000570273 NAA25Q14CX7 972 aa14.82□□□□□ -0.04
HERPUD1-219ENST00000570273 PERM1Q5SV97 790 aa14.82□□□□□ -0.04
HERPUD1-219ENST00000570273 VWA5B1Q5TIE3 1220 aa14.82□□□□□ -0.04
HERPUD1-219ENST00000570273 GKAP1Q5VSY0 366 aaPredicted RBP14.82□□□□□ -0.04
HERPUD1-219ENST00000570273 FRG2Q64ET8 278 aa14.82□□□□□ -0.04
HERPUD1-219ENST00000570273 SCIMPQ6UWF3 145 aa14.82□□□□□ -0.04
HERPUD1-219ENST00000570273 ASCL5Q7RTU5 278 aa14.82□□□□□ -0.04
HERPUD1-219ENST00000570273 FAM129CQ86XR2 697 aa14.82□□□□□ -0.04
HERPUD1-219ENST00000570273 HOMEZQ8IX15 550 aa14.82□□□□□ -0.04
HERPUD1-219ENST00000570273 IFI44Q8TCB0 444 aa14.82□□□□□ -0.04
HERPUD1-219ENST00000570273 C10orf82Q8WW14 230 aa14.82□□□□□ -0.04
HERPUD1-219ENST00000570273 SELENOMQ8WWX9 145 aa14.82□□□□□ -0.04
HERPUD1-219ENST00000570273 NCSTNQ92542 709 aa14.82□□□□□ -0.04
HERPUD1-219ENST00000570273 UBE2E3Q969T4 207 aa14.82□□□□□ -0.04
HERPUD1-219ENST00000570273 CNDP2Q96KP4 475 aaKnown RBP14.82□□□□□ -0.04
HERPUD1-219ENST00000570273 PPM1MQ96MI6 270 aa14.82□□□□□ -0.04
HERPUD1-219ENST00000570273 FRG2BQ96QU4 278 aa14.82□□□□□ -0.04
HERPUD1-219ENST00000570273 PFDN4Q9NQP4 134 aa14.82□□□□□ -0.04
HERPUD1-219ENST00000570273 RXFP3Q9NSD7 469 aa14.82□□□□□ -0.04
HERPUD1-219ENST00000570273 TMEM184CQ9NVA4 438 aa14.82□□□□□ -0.04
HERPUD1-219ENST00000570273 FTSJ1Q9UET6 329 aa14.82□□□□□ -0.04
HERPUD1-219ENST00000570273 SNX7Q9UNH6 387 aa14.82□□□□□ -0.04
HERPUD1-219ENST00000570273 PTGDR2Q9Y5Y4 395 aa14.82□□□□□ -0.04
HERPUD1-219ENST00000570273 H0YIV9 168 aa14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 ZNF195O14628 629 aa14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 HAT1O14929 419 aa14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 CAPN5O15484 640 aaPredicted RBP14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 B4GAT1O43505 415 aa14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 ULK1O75385 1050 aa14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 LDOC1O95751 146 aaPredicted RBP14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 PVRP15151 417 aa14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 CDH3P22223 829 aa14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 GRK3P35626 688 aa14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 GRIA3P42263 894 aa14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 LSSP48449 732 aa14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 INHBCP55103 352 aa14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 GFERP55789 205 aa14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 DDX39BQ13838 428 aaKnown RBP14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 RBBP5Q15291 538 aaKnown RBP14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 SLC9B1Q4ZJI4 515 aa14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 ZNF425Q6IV72 752 aa14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 FAM92BQ6ZTR7 304 aa14.81□□□□□ -0.04
HERPUD1-219ENST00000570273 PIGWQ7Z7B1 504 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms