RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 GRHL3Q8TE85 626 aa12.51□□□□□ -0.41
SPG7-221ENST00000569720 FAR1Q8WVX9 515 aa12.51□□□□□ -0.41
SPG7-221ENST00000569720 MVB12AQ96EY5 273 aa12.51□□□□□ -0.41
SPG7-221ENST00000569720 YIPF2Q9BWQ6 316 aa12.51□□□□□ -0.41
SPG7-221ENST00000569720 FAM129AQ9BZQ8 928 aa12.51□□□□□ -0.41
SPG7-221ENST00000569720 ZNF160Q9HCG1 818 aa12.51□□□□□ -0.41
SPG7-221ENST00000569720 SAMD15Q9P1V8 674 aa12.51□□□□□ -0.41
SPG7-221ENST00000569720 CRYBG3Q68DQ2 2970 aa12.51□□□□□ -0.41
SPG7-221ENST00000569720 IGLV3-12A0A075B6K2 115 aa12.5□□□□□ -0.41
SPG7-221ENST00000569720 ARHGEF33A8MVX0 844 aa12.5□□□□□ -0.41
SPG7-221ENST00000569720 H0YGG7 62 aa12.5□□□□□ -0.41
SPG7-221ENST00000569720 TXNDC9O14530 226 aa12.5□□□□□ -0.41
SPG7-221ENST00000569720 PCDH17O14917 1159 aa12.5□□□□□ -0.41
SPG7-221ENST00000569720 NRP2O60462 931 aa12.5□□□□□ -0.41
SPG7-221ENST00000569720 PSIP1O75475 530 aaKnown RBP12.5□□□□□ -0.41
SPG7-221ENST00000569720 CLDN1O95832 211 aa12.5□□□□□ -0.41
SPG7-221ENST00000569720 TUBBP07437 444 aa12.5□□□□□ -0.41
SPG7-221ENST00000569720 ANXA5P08758 320 aa12.5□□□□□ -0.41
SPG7-221ENST00000569720 ERGP11308 486 aa12.5□□□□□ -0.41
SPG7-221ENST00000569720 EDN3P14138 238 aa12.5□□□□□ -0.41
SPG7-221ENST00000569720 ARNTP27540 789 aa12.5□□□□□ -0.41
SPG7-221ENST00000569720 EMP2P54851 167 aa12.5□□□□□ -0.41
SPG7-221ENST00000569720 ARF3P61204 181 aaPredicted RBP12.5□□□□□ -0.41
SPG7-221ENST00000569720 PRTGQ2VWP7 1150 aa12.5□□□□□ -0.41
SPG7-221ENST00000569720 KLHL38Q2WGJ6 581 aa12.5□□□□□ -0.41
SPG7-221ENST00000569720 ACSBG2Q5FVE4 666 aa12.5□□□□□ -0.41
SPG7-221ENST00000569720 VWA2Q5GFL6 755 aa12.5□□□□□ -0.41
SPG7-221ENST00000569720 ATG9BQ674R7 924 aa12.5□□□□□ -0.41
SPG7-221ENST00000569720 FBXO42Q6P3S6 717 aa12.5□□□□□ -0.41
SPG7-221ENST00000569720 CASC4Q6P4E1 433 aa12.5□□□□□ -0.41
SPG7-221ENST00000569720 FAM180AQ6UWF9 173 aa12.5□□□□□ -0.41
SPG7-221ENST00000569720 SUSD1Q6UWL2 747 aa12.5□□□□□ -0.41
SPG7-221ENST00000569720 NDUFAF7Q7L592 441 aa12.5□□□□□ -0.41
SPG7-221ENST00000569720 PCGF5Q86SE9 256 aa12.5□□□□□ -0.41
SPG7-221ENST00000569720 DTWD1Q8N5C7 304 aa12.5□□□□□ -0.41
SPG7-221ENST00000569720 CSNK1A1LQ8N752 337 aa12.5□□□□□ -0.41
SPG7-221ENST00000569720 BBOF1Q8ND07 529 aa12.5□□□□□ -0.41
SPG7-221ENST00000569720 RERGQ96A58 199 aaPredicted RBP12.5□□□□□ -0.41
SPG7-221ENST00000569720 FAM136AQ96C01 138 aa12.5□□□□□ -0.41
SPG7-221ENST00000569720 C10orf90Q96M02 699 aa12.5□□□□□ -0.41
SPG7-221ENST00000569720 PLCD4Q9BRC7 762 aa12.5□□□□□ -0.41
SPG7-221ENST00000569720 CCDC68Q9H2F9 335 aa12.5□□□□□ -0.41
SPG7-221ENST00000569720 C14orf105Q9NVL8 296 aa12.5□□□□□ -0.41
SPG7-221ENST00000569720 INTS10Q9NVR2 710 aaKnown RBP12.5□□□□□ -0.41
SPG7-221ENST00000569720 TRPC4Q9UBN4 977 aa12.5□□□□□ -0.41
SPG7-221ENST00000569720 CELSR2Q9HCU4 2923 aa12.49□□□□□ -0.41
SPG7-221ENST00000569720 CREBBPQ92793 2442 aa12.49□□□□□ -0.41
SPG7-221ENST00000569720 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.49□□□□□ -0.41
SPG7-221ENST00000569720 MAGEB16A2A368 324 aa12.49□□□□□ -0.41
SPG7-221ENST00000569720 DYTNA2CJ06 578 aa12.49□□□□□ -0.41
SPG7-221ENST00000569720 EFCAB8A8MWE9 144 aa12.49□□□□□ -0.41
SPG7-221ENST00000569720 IDSB3KWA1 339 aa12.49□□□□□ -0.41
SPG7-221ENST00000569720 MYO1CO00159 1063 aa12.49□□□□□ -0.41
SPG7-221ENST00000569720 KLHL18O94889 574 aa12.49□□□□□ -0.41
SPG7-221ENST00000569720 SLU7O95391 586 aaKnown RBP12.49□□□□□ -0.41
SPG7-221ENST00000569720 MED26O95402 600 aa12.49□□□□□ -0.41
SPG7-221ENST00000569720 HEXBP07686 556 aa12.49□□□□□ -0.41
SPG7-221ENST00000569720 COL8A1P27658 744 aa12.49□□□□□ -0.41
SPG7-221ENST00000569720 TERF1P54274 439 aa12.49□□□□□ -0.41
SPG7-221ENST00000569720 PNLIPRP1P54315 467 aa12.49□□□□□ -0.41
SPG7-221ENST00000569720 AP2B1P63010 937 aa12.49□□□□□ -0.41
SPG7-221ENST00000569720 ARG2P78540 354 aa12.49□□□□□ -0.41
SPG7-221ENST00000569720 PRDX1Q06830 199 aaKnown RBP12.49□□□□□ -0.41
SPG7-221ENST00000569720 Q0VFX4 171 aa12.49□□□□□ -0.41
SPG7-221ENST00000569720 THOC5Q13769 683 aaKnown RBP12.49□□□□□ -0.41
SPG7-221ENST00000569720 DSG2Q14126 1118 aa12.49□□□□□ -0.41
SPG7-221ENST00000569720 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.49□□□□□ -0.41
SPG7-221ENST00000569720 GARNL3Q5VVW2 1013 aa12.49□□□□□ -0.41
SPG7-221ENST00000569720 ICE2Q659A1 982 aa12.49□□□□□ -0.41
SPG7-221ENST00000569720 ZNF787Q6DD87 383 aa12.49□□□□□ -0.41
SPG7-221ENST00000569720 NEPROQ6NW34 567 aa12.49□□□□□ -0.41
SPG7-221ENST00000569720 RPUSD3Q6P087 351 aaKnown RBP12.49□□□□□ -0.41
SPG7-221ENST00000569720 NEK10Q6ZWH5 1172 aa12.49□□□□□ -0.41
SPG7-221ENST00000569720 PAQR7Q86WK9 346 aa12.49□□□□□ -0.41
SPG7-221ENST00000569720 CILP2Q8IUL8 1156 aa12.49□□□□□ -0.41
SPG7-221ENST00000569720 BCORP1Q8N888 145 aa12.49□□□□□ -0.41
SPG7-221ENST00000569720 OR1N1Q8NGS0 311 aa12.49□□□□□ -0.41
SPG7-221ENST00000569720 C8orf44Q96CB5 159 aa12.49□□□□□ -0.41
SPG7-221ENST00000569720 MMABQ96EY8 250 aaPredicted RBP12.49□□□□□ -0.41
SPG7-221ENST00000569720 EBNA1BP2Q99848 306 aaKnown RBP12.49□□□□□ -0.41
SPG7-221ENST00000569720 RAB17Q9H0T7 212 aa12.49□□□□□ -0.41
SPG7-221ENST00000569720 MKKSQ9NPJ1 570 aaPredicted RBP12.49□□□□□ -0.41
SPG7-221ENST00000569720 RIC8BQ9NVN3 520 aa12.49□□□□□ -0.41
SPG7-221ENST00000569720 STOX2Q9P2F5 926 aaPredicted RBP12.49□□□□□ -0.41
SPG7-221ENST00000569720 TAC3Q9UHF0 121 aa12.49□□□□□ -0.41
SPG7-221ENST00000569720 OSGIN2Q9Y236 505 aa12.49□□□□□ -0.41
SPG7-221ENST00000569720 RUVBL1Q9Y265 456 aaKnown RBP12.49□□□□□ -0.41
SPG7-221ENST00000569720 TCRBV7S3A2A0A539 114 aa12.48□□□□□ -0.41
SPG7-221ENST00000569720 LRRTM2O43300 516 aa12.48□□□□□ -0.41
SPG7-221ENST00000569720 WFS1O76024 890 aa12.48□□□□□ -0.41
SPG7-221ENST00000569720 SYF2O95926 243 aaKnown RBP12.48□□□□□ -0.41
SPG7-221ENST00000569720 SERPINA7P05543 415 aa12.48□□□□□ -0.41
SPG7-221ENST00000569720 PRR35P0CG20 571 aa12.48□□□□□ -0.41
SPG7-221ENST00000569720 COX6A1P12074 109 aa12.48□□□□□ -0.41
SPG7-221ENST00000569720 EZRP15311 586 aaKnown RBP12.48□□□□□ -0.41
SPG7-221ENST00000569720 DCTP40126 519 aa12.48□□□□□ -0.41
SPG7-221ENST00000569720 YBX1P67809 324 aaKnown RBP12.48□□□□□ -0.41
SPG7-221ENST00000569720 ABATP80404 500 aa12.48□□□□□ -0.41
SPG7-221ENST00000569720 DR1Q01658 176 aa12.48□□□□□ -0.41
SPG7-221ENST00000569720 EEF1A2Q05639 463 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms