RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	MYOG	P15173	224 aa		2.6	□□□□□ -1.99
UBR1-209	ENST00000569243	BCL3	P20749	454 aa		2.6	□□□□□ -1.99
UBR1-209	ENST00000569243	JAK1	P23458	1154 aa		2.6	□□□□□ -1.99
UBR1-209	ENST00000569243	LHX1	P48742	406 aa		2.6	□□□□□ -1.99
UBR1-209	ENST00000569243	LMAN1	P49257	510 aa		2.6	□□□□□ -1.99
UBR1-209	ENST00000569243	CLDN15	P56746	228 aa		2.6	□□□□□ -1.99
UBR1-209	ENST00000569243	PSMC6	P62333	389 aa		2.6	□□□□□ -1.99
UBR1-209	ENST00000569243	DLK1	P80370	383 aa		2.6	□□□□□ -1.99
UBR1-209	ENST00000569243	SRSF9	Q13242	221 aa	Known RBP eCLIP	2.6	□□□□□ -1.99
UBR1-209	ENST00000569243	CUL3	Q13618	768 aa		2.6	□□□□□ -1.99
UBR1-209	ENST00000569243	MTF1	Q14872	753 aa		2.6	□□□□□ -1.99
UBR1-209	ENST00000569243	MAPRE1	Q15691	268 aa	Known RBP	2.6	□□□□□ -1.99
UBR1-209	ENST00000569243	CDHR3	Q6ZTQ4	885 aa		2.6	□□□□□ -1.99
UBR1-209	ENST00000569243	IL17REL	Q6ZVW7	336 aa		2.6	□□□□□ -1.99
UBR1-209	ENST00000569243	NUP54	Q7Z3B4	507 aa		2.6	□□□□□ -1.99
UBR1-209	ENST00000569243	FGFRL1	Q8N441	504 aa		2.6	□□□□□ -1.99
UBR1-209	ENST00000569243	FAM89B	Q8N5H3	189 aa		2.6	□□□□□ -1.99
UBR1-209	ENST00000569243		Q8N7P7	452 aa		2.6	□□□□□ -1.99
UBR1-209	ENST00000569243	SLC37A3	Q8NCC5	494 aa		2.6	□□□□□ -1.99
UBR1-209	ENST00000569243	C9orf43	Q8TAL5	461 aa	Predicted RBP	2.6	□□□□□ -1.99
UBR1-209	ENST00000569243	ZNF830	Q96NB3	372 aa	Predicted RBP	2.6	□□□□□ -1.99
UBR1-209	ENST00000569243	LRRC3B	Q96PB8	259 aa		2.6	□□□□□ -1.99
UBR1-209	ENST00000569243	MAP3K3	Q99759	626 aa		2.6	□□□□□ -1.99
UBR1-209	ENST00000569243	ZMYND12	Q9H0C1	365 aa		2.6	□□□□□ -1.99
UBR1-209	ENST00000569243	NOL11	Q9H8H0	719 aa	Known RBP	2.6	□□□□□ -1.99
UBR1-209	ENST00000569243	PDE7B	Q9NP56	450 aa		2.6	□□□□□ -1.99
UBR1-209	ENST00000569243	MYNN	Q9NPC7	610 aa		2.6	□□□□□ -1.99
UBR1-209	ENST00000569243	MORF4L1	Q9UBU8	362 aa		2.6	□□□□□ -1.99
UBR1-209	ENST00000569243	ANAPC2	Q9UJX6	822 aa		2.6	□□□□□ -1.99
UBR1-209	ENST00000569243	CELA1	Q9UNI1	258 aa		2.6	□□□□□ -1.99
UBR1-209	ENST00000569243	TRBV5-5	A0A0J9YX44	114 aa		2.59	□□□□□ -1.99
UBR1-209	ENST00000569243		A0A1W2PPM1	405 aa		2.59	□□□□□ -1.99
UBR1-209	ENST00000569243	SAG	P10523	405 aa	Predicted RBP	2.59	□□□□□ -1.99
UBR1-209	ENST00000569243	PRKAR1A	P10644	381 aa		2.59	□□□□□ -1.99
UBR1-209	ENST00000569243	EPCAM	P16422	314 aa		2.59	□□□□□ -1.99
UBR1-209	ENST00000569243	RPL35A	P18077	110 aa	Known RBP	2.59	□□□□□ -1.99
UBR1-209	ENST00000569243	DNASE1	P24855	282 aa		2.59	□□□□□ -1.99
UBR1-209	ENST00000569243	LIG4	P49917	911 aa		2.59	□□□□□ -1.99
UBR1-209	ENST00000569243	LIMK1	P53667	647 aa		2.59	□□□□□ -1.99
UBR1-209	ENST00000569243	SGCG	Q13326	291 aa		2.59	□□□□□ -1.99
UBR1-209	ENST00000569243	PTPRCAP	Q14761	206 aa		2.59	□□□□□ -1.99
UBR1-209	ENST00000569243	NPTX1	Q15818	432 aa		2.59	□□□□□ -1.99
UBR1-209	ENST00000569243	MS4A18	Q3C1V0	323 aa		2.59	□□□□□ -1.99
UBR1-209	ENST00000569243	RNF212	Q495C1	297 aa		2.59	□□□□□ -1.99
UBR1-209	ENST00000569243	MCMDC2	Q4G0Z9	681 aa		2.59	□□□□□ -1.99
UBR1-209	ENST00000569243	CES4A	Q5XG92	561 aa		2.59	□□□□□ -1.99
UBR1-209	ENST00000569243	ZNF841	Q6ZN19	808 aa		2.59	□□□□□ -1.99
UBR1-209	ENST00000569243	ZER1	Q7Z7L7	766 aa		2.59	□□□□□ -1.99
UBR1-209	ENST00000569243	CERS3	Q8IU89	383 aa		2.59	□□□□□ -1.99
UBR1-209	ENST00000569243	LGI2	Q8N0V4	545 aa		2.59	□□□□□ -1.99
UBR1-209	ENST00000569243	KLHDC1	Q8N7A1	406 aa		2.59	□□□□□ -1.99
UBR1-209	ENST00000569243	OR4K1	Q8NGD4	311 aa		2.59	□□□□□ -1.99
UBR1-209	ENST00000569243	OR10Q1	Q8NGQ4	319 aa		2.59	□□□□□ -1.99
UBR1-209	ENST00000569243	C11orf45	Q8TAV5	145 aa		2.59	□□□□□ -1.99
UBR1-209	ENST00000569243	CHPT1	Q8WUD6	406 aa		2.59	□□□□□ -1.99
UBR1-209	ENST00000569243	NXNL1	Q96CM4	212 aa		2.59	□□□□□ -1.99
UBR1-209	ENST00000569243	FAM71F1	Q96KD3	344 aa	Predicted RBP	2.59	□□□□□ -1.99
UBR1-209	ENST00000569243	ATF6B	Q99941	703 aa		2.59	□□□□□ -1.99
UBR1-209	ENST00000569243	OLAH	Q9NV23	265 aa		2.59	□□□□□ -1.99
UBR1-209	ENST00000569243	GTSE1	Q9NYZ3	720 aa		2.59	□□□□□ -1.99
UBR1-209	ENST00000569243	ZNF107	Q9UII5	783 aa	Predicted RBP	2.59	□□□□□ -1.99
UBR1-209	ENST00000569243	ELF5	Q9UKW6	265 aa	Predicted RBP	2.59	□□□□□ -1.99
UBR1-209	ENST00000569243	TMED3	Q9Y3Q3	217 aa		2.59	□□□□□ -1.99
UBR1-209	ENST00000569243	BEST1	O76090	585 aa		2.58	□□□□□ -2
UBR1-209	ENST00000569243	SLCO2B1	O94956	709 aa		2.58	□□□□□ -2
UBR1-209	ENST00000569243	ABCB1	P08183	1280 aa	Predicted RBP	2.58	□□□□□ -2
UBR1-209	ENST00000569243	NR2F1	P10589	423 aa		2.58	□□□□□ -2
UBR1-209	ENST00000569243	PDHA2	P29803	388 aa		2.58	□□□□□ -2
UBR1-209	ENST00000569243	OR3A2	P47893	321 aa		2.58	□□□□□ -2
UBR1-209	ENST00000569243	MAPK12	P53778	367 aa		2.58	□□□□□ -2
UBR1-209	ENST00000569243	FCHO2	Q0JRZ9	810 aa		2.58	□□□□□ -2
UBR1-209	ENST00000569243	PRKG2	Q13237	762 aa		2.58	□□□□□ -2
UBR1-209	ENST00000569243	CDH18	Q13634	790 aa		2.58	□□□□□ -2
UBR1-209	ENST00000569243	TRIM29	Q14134	588 aa		2.58	□□□□□ -2
UBR1-209	ENST00000569243	PTPN14	Q15678	1187 aa		2.58	□□□□□ -2
UBR1-209	ENST00000569243	EXT1	Q16394	746 aa		2.58	□□□□□ -2
UBR1-209	ENST00000569243	C3AR1	Q16581	482 aa		2.58	□□□□□ -2
UBR1-209	ENST00000569243	GARNL3	Q5VVW2	1013 aa		2.58	□□□□□ -2
UBR1-209	ENST00000569243	RSBN1	Q5VWQ0	802 aa	Predicted RBP	2.58	□□□□□ -2
UBR1-209	ENST00000569243	OR4A47	Q6IF82	309 aa		2.58	□□□□□ -2
UBR1-209	ENST00000569243	LCLAT1	Q6UWP7	414 aa		2.58	□□□□□ -2
UBR1-209	ENST00000569243	VIT	Q6UXI7	678 aa		2.58	□□□□□ -2
UBR1-209	ENST00000569243	C3P1	Q6ZMU1	363 aa		2.58	□□□□□ -2
UBR1-209	ENST00000569243	FCRLA	Q7L513	359 aa		2.58	□□□□□ -2
UBR1-209	ENST00000569243	CEACAM19	Q7Z692	300 aa		2.58	□□□□□ -2
UBR1-209	ENST00000569243	FAM131B	Q86XD5	332 aa		2.58	□□□□□ -2
UBR1-209	ENST00000569243	RYBP	Q8N488	228 aa	Predicted RBP	2.58	□□□□□ -2
UBR1-209	ENST00000569243	TTC30B	Q8N4P2	665 aa		2.58	□□□□□ -2
UBR1-209	ENST00000569243	SUMF1	Q8NBK3	374 aa		2.58	□□□□□ -2
UBR1-209	ENST00000569243	RFT1	Q96AA3	541 aa		2.58	□□□□□ -2
UBR1-209	ENST00000569243	PTER	Q96BW5	349 aa		2.58	□□□□□ -2
UBR1-209	ENST00000569243	THOC1	Q96FV9	657 aa	Known RBP	2.58	□□□□□ -2
UBR1-209	ENST00000569243	ATXN7L3B	Q96GX2	97 aa		2.58	□□□□□ -2
UBR1-209	ENST00000569243	GPR88	Q9GZN0	384 aa		2.58	□□□□□ -2
UBR1-209	ENST00000569243	NYX	Q9GZU5	481 aa		2.58	□□□□□ -2
UBR1-209	ENST00000569243	CDH20	Q9HBT6	801 aa		2.58	□□□□□ -2
UBR1-209	ENST00000569243	HAO2	Q9NYQ3	351 aa		2.58	□□□□□ -2
UBR1-209	ENST00000569243	CPSF2	Q9P2I0	782 aa	Known RBP	2.58	□□□□□ -2
UBR1-209	ENST00000569243	CHORDC1	Q9UHD1	332 aa	Predicted RBP	2.58	□□□□□ -2
UBR1-209	ENST00000569243	SLC24A2	Q9UI40	661 aa		2.58	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms