RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 RAD51AP1Q96B01 352 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 MRFAP1L1Q96HT8 127 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 SECISBP2Q96T21 854 aaKnown RBP8.19□□□□□ -1.1
SMG1-216ENST00000569122 GPATCH1Q9BRR8 931 aaKnown RBP8.19□□□□□ -1.1
SMG1-216ENST00000569122 DRC3Q9H069 523 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 ANO10Q9NW15 660 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 ANKRD10Q9NXR5 420 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 L3MBTL1Q9Y468 752 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.19□□□□□ -1.1
SMG1-216ENST00000569122 DOCK10Q96BY6 2186 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 CSPG4Q6UVK1 2322 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 LOC105369274A0A096LPK9 316 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 LOC102723532A0A0G2JNH3 316 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 FIGNL2A6NMB9 653 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 H0YGG7 62 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 H0YIG0 161 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 CDC40O60508 579 aaKnown RBP eCLIP8.18□□□□□ -1.1
SMG1-216ENST00000569122 SEC24DO94855 1032 aaPredicted RBP8.18□□□□□ -1.1
SMG1-216ENST00000569122 GOSR1O95249 250 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 SERPING1P05155 500 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 TFEBP19484 476 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 CMPK1P30085 196 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 ARF3P61204 181 aaPredicted RBP8.18□□□□□ -1.1
SMG1-216ENST00000569122 MINDY4Q4G0A6 757 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 FIGNQ5HY92 759 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 MFSD4BQ5TF39 518 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 FCRLBQ6BAA4 426 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 FRMPD2BQ6IN97 320 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 FGD2Q7Z6J4 655 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 TAX1BP1Q86VP1 789 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 CDC20BQ86Y33 519 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 CCDC71Q8IV32 467 aaPredicted RBP8.18□□□□□ -1.1
SMG1-216ENST00000569122 ZZZ3Q8IYH5 903 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 SLC22A15Q8IZD6 547 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 OR4N4Q8N0Y3 316 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 MARVELD2Q8N4S9 558 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 C2orf73Q8N5S3 287 aaPredicted RBP8.18□□□□□ -1.1
SMG1-216ENST00000569122 CSNK1A1LQ8N752 337 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 SIMC1Q8NDZ2 872 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 WFDC11Q8NEX6 87 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 OR2L3Q8NG85 312 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 OR5M3Q8NGP4 307 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 HMGCLL1Q8TB92 370 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 CREB3L4Q8TEY5 395 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 FAM222BQ8WU58 562 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 STYXQ8WUJ0 223 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 SEC16BQ96JE7 1060 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 C10orf90Q96M02 699 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 LPAR4Q99677 370 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 SMR3AQ99954 134 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 HES7Q9BYE0 225 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 GBA3Q9H227 469 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 LIME1Q9H400 295 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 CACNA1CQ13936 2221 aa8.18□□□□□ -1.1
SMG1-216ENST00000569122 OR2A25A4D2G3 310 aa8.17□□□□□ -1.1
SMG1-216ENST00000569122 A6NNC1 897 aa8.17□□□□□ -1.1
SMG1-216ENST00000569122 NDC80O14777 642 aa8.17□□□□□ -1.1
SMG1-216ENST00000569122 ZNF189O75820 626 aaPredicted RBP8.17□□□□□ -1.1
SMG1-216ENST00000569122 STK10O94804 968 aaKnown RBP8.17□□□□□ -1.1
SMG1-216ENST00000569122 MED26O95402 600 aa8.17□□□□□ -1.1
SMG1-216ENST00000569122 KRT1P04264 644 aa8.17□□□□□ -1.1
SMG1-216ENST00000569122 APOA4P06727 396 aa8.17□□□□□ -1.1
SMG1-216ENST00000569122 IL10P22301 178 aa8.17□□□□□ -1.1
SMG1-216ENST00000569122 PTGER1P34995 402 aa8.17□□□□□ -1.1
SMG1-216ENST00000569122 ADRA1AP35348 466 aa8.17□□□□□ -1.1
SMG1-216ENST00000569122 CCNFP41002 786 aa8.17□□□□□ -1.1
SMG1-216ENST00000569122 SLC1A1P43005 524 aa8.17□□□□□ -1.1
SMG1-216ENST00000569122 RELAQ04206 551 aa8.17□□□□□ -1.1
SMG1-216ENST00000569122 HSPA14Q0VDF9 509 aa8.17□□□□□ -1.1
SMG1-216ENST00000569122 TMED2Q15363 201 aa8.17□□□□□ -1.1
SMG1-216ENST00000569122 DBN1Q16643 649 aa8.17□□□□□ -1.1
SMG1-216ENST00000569122 FAM182AQ5T1J6 154 aa8.17□□□□□ -1.1
SMG1-216ENST00000569122 FBXO42Q6P3S6 717 aa8.17□□□□□ -1.1
SMG1-216ENST00000569122 LRRC8BQ6P9F7 803 aa8.17□□□□□ -1.1
SMG1-216ENST00000569122 SASS6Q6UVJ0 657 aa8.17□□□□□ -1.1
SMG1-216ENST00000569122 RGS9BPQ6ZS82 235 aa8.17□□□□□ -1.1
SMG1-216ENST00000569122 APTXQ7Z2E3 356 aaKnown RBP8.17□□□□□ -1.1
SMG1-216ENST00000569122 RPS19BP1Q86WX3 136 aaKnown RBP8.17□□□□□ -1.1
SMG1-216ENST00000569122 ZC3H7AQ8IWR0 971 aaKnown RBP8.17□□□□□ -1.1
SMG1-216ENST00000569122 DTWD1Q8N5C7 304 aa8.17□□□□□ -1.1
SMG1-216ENST00000569122 AMER3Q8N944 861 aa8.17□□□□□ -1.1
SMG1-216ENST00000569122 CFAP61Q8NHU2 1237 aa8.17□□□□□ -1.1
SMG1-216ENST00000569122 C16orf52Q8NHV5 167 aa8.17□□□□□ -1.1
SMG1-216ENST00000569122 CDKN2AIPNLQ96HQ2 116 aa8.17□□□□□ -1.1
SMG1-216ENST00000569122 FOPNLQ96NB1 174 aa8.17□□□□□ -1.1
SMG1-216ENST00000569122 MIPEPQ99797 713 aa8.17□□□□□ -1.1
SMG1-216ENST00000569122 MENTQ9BUN1 341 aa8.17□□□□□ -1.1
SMG1-216ENST00000569122 VN1R1Q9GZP7 353 aa8.17□□□□□ -1.1
SMG1-216ENST00000569122 CDCP1Q9H5V8 836 aa8.17□□□□□ -1.1
SMG1-216ENST00000569122 TRIM45Q9H8W5 580 aaPredicted RBP8.17□□□□□ -1.1
SMG1-216ENST00000569122 ARNT2Q9HBZ2 717 aa8.17□□□□□ -1.1
SMG1-216ENST00000569122 NLE1Q9NVX2 485 aaPredicted RBP8.17□□□□□ -1.1
SMG1-216ENST00000569122 BEX4Q9NWD9 120 aaPredicted RBP8.17□□□□□ -1.1
SMG1-216ENST00000569122 B4GALT7Q9UBV7 327 aa8.17□□□□□ -1.1
SMG1-216ENST00000569122 A0A087X0T9 212 aa8.16□□□□□ -1.1
SMG1-216ENST00000569122 OR14I1A6ND48 311 aa8.16□□□□□ -1.1
SMG1-216ENST00000569122 CES2O00748 559 aa8.16□□□□□ -1.1
SMG1-216ENST00000569122 FCHO1O14526 889 aa8.16□□□□□ -1.1
SMG1-216ENST00000569122 BCKDKO14874 412 aa8.16□□□□□ -1.1
SMG1-216ENST00000569122 KPNA5O15131 536 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms