RNA–Protein interactions for RNA: ENST00000568232.1

CLK3-222, Transcript of CDC like kinase 3, humanhuman

Gene CLK3, Length 958 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-222ENST00000568232 C8BP07358 591 aa11.09□□□□□ -0.63
CLK3-222ENST00000568232 GSTM1P09488 218 aa11.09□□□□□ -0.63
CLK3-222ENST00000568232 FAM228BP0C875 321 aa11.09□□□□□ -0.63
CLK3-222ENST00000568232 ERVK-10P10266 1014 aa11.09□□□□□ -0.63
CLK3-222ENST00000568232 PECAM1P16284 738 aaPredicted RBP11.09□□□□□ -0.63
CLK3-222ENST00000568232 SNRPNP63162 240 aaKnown RBP11.09□□□□□ -0.63
CLK3-222ENST00000568232 GSTM4Q03013 218 aa11.09□□□□□ -0.63
CLK3-222ENST00000568232 HKDC1Q2TB90 917 aa11.09□□□□□ -0.63
CLK3-222ENST00000568232 PRTGQ2VWP7 1150 aa11.09□□□□□ -0.63
CLK3-222ENST00000568232 SYTL3Q4VX76 610 aa11.09□□□□□ -0.63
CLK3-222ENST00000568232 FBXO42Q6P3S6 717 aa11.09□□□□□ -0.63
CLK3-222ENST00000568232 ARSKQ6UWY0 536 aa11.09□□□□□ -0.63
CLK3-222ENST00000568232 RANBP10Q6VN20 620 aa11.09□□□□□ -0.63
CLK3-222ENST00000568232 CHSY3Q70JA7 882 aa11.09□□□□□ -0.63
CLK3-222ENST00000568232 CPEB2Q7Z5Q1 589 aaKnown RBP11.09□□□□□ -0.63
CLK3-222ENST00000568232 VRK3Q8IV63 474 aa11.09□□□□□ -0.63
CLK3-222ENST00000568232 OR2L8Q8NGY9 312 aa11.09□□□□□ -0.63
CLK3-222ENST00000568232 DNAJC1Q96KC8 554 aaKnown RBP11.09□□□□□ -0.63
CLK3-222ENST00000568232 CYTH2Q99418 400 aa11.09□□□□□ -0.63
CLK3-222ENST00000568232 OLFM1Q99784 485 aa11.09□□□□□ -0.63
CLK3-222ENST00000568232 TP63Q9H3D4 680 aaPredicted RBP11.09□□□□□ -0.63
CLK3-222ENST00000568232 ZNF395Q9H8N7 513 aaPredicted RBP11.09□□□□□ -0.63
CLK3-222ENST00000568232 CTTNBP2NLQ9P2B4 639 aa11.09□□□□□ -0.63
CLK3-222ENST00000568232 RSPH14Q9UHP6 348 aa11.09□□□□□ -0.63
CLK3-222ENST00000568232 CDC14AQ9UNH5 594 aa11.09□□□□□ -0.63
CLK3-222ENST00000568232 RUVBL1Q9Y265 456 aaKnown RBP11.09□□□□□ -0.63
CLK3-222ENST00000568232 MXRA5Q9NR99 2828 aa11.08□□□□□ -0.64
CLK3-222ENST00000568232 A0A0A6YYC8 382 aaPredicted RBP11.08□□□□□ -0.64
CLK3-222ENST00000568232 USP27XA6NNY8 438 aa11.08□□□□□ -0.64
CLK3-222ENST00000568232 ZNF487B1APH4 448 aa11.08□□□□□ -0.64
CLK3-222ENST00000568232 H0YGG7 62 aa11.08□□□□□ -0.64
CLK3-222ENST00000568232 I3L1I5 382 aaPredicted RBP11.08□□□□□ -0.64
CLK3-222ENST00000568232 FOXS1O43638 330 aa11.08□□□□□ -0.64
CLK3-222ENST00000568232 HS6ST1O60243 411 aa11.08□□□□□ -0.64
CLK3-222ENST00000568232 NME2P1O60361 137 aa11.08□□□□□ -0.64
CLK3-222ENST00000568232 SLC25A12O75746 678 aa11.08□□□□□ -0.64
CLK3-222ENST00000568232 SUN1O94901 812 aa11.08□□□□□ -0.64
CLK3-222ENST00000568232 AP2A2O94973 939 aa11.08□□□□□ -0.64
CLK3-222ENST00000568232 ATE1O95260 518 aa11.08□□□□□ -0.64
CLK3-222ENST00000568232 CRTAMO95727 393 aa11.08□□□□□ -0.64
CLK3-222ENST00000568232 ZFXP17010 805 aaPredicted RBP11.08□□□□□ -0.64
CLK3-222ENST00000568232 NME2P22392 152 aa11.08□□□□□ -0.64
CLK3-222ENST00000568232 ADRA1AP35348 466 aa11.08□□□□□ -0.64
CLK3-222ENST00000568232 ARF3P61204 181 aaPredicted RBP11.08□□□□□ -0.64
CLK3-222ENST00000568232 NFKBIBQ15653 356 aa11.08□□□□□ -0.64
CLK3-222ENST00000568232 PAMR1Q6UXH9 720 aa11.08□□□□□ -0.64
CLK3-222ENST00000568232 UNC5DQ6UXZ4 953 aa11.08□□□□□ -0.64
CLK3-222ENST00000568232 RNF44Q7L0R7 432 aa11.08□□□□□ -0.64
CLK3-222ENST00000568232 ZNF227Q86WZ6 799 aa11.08□□□□□ -0.64
CLK3-222ENST00000568232 LIX1LQ8IVB5 337 aa11.08□□□□□ -0.64
CLK3-222ENST00000568232 OR10Q1Q8NGQ4 319 aa11.08□□□□□ -0.64
CLK3-222ENST00000568232 METTL21AQ8WXB1 218 aa11.08□□□□□ -0.64
CLK3-222ENST00000568232 VN1R1Q9GZP7 353 aa11.08□□□□□ -0.64
CLK3-222ENST00000568232 C10orf88Q9H8K7 445 aa11.08□□□□□ -0.64
CLK3-222ENST00000568232 CRIM1Q9NZV1 1036 aa11.08□□□□□ -0.64
CLK3-222ENST00000568232 EDARQ9UNE0 448 aa11.08□□□□□ -0.64
CLK3-222ENST00000568232 ATRQ13535 2644 aa11.08□□□□□ -0.64
CLK3-222ENST00000568232 A0A0U1RQJ8 604 aa11.07□□□□□ -0.64
CLK3-222ENST00000568232 TFECO14948 347 aaPredicted RBP11.07□□□□□ -0.64
CLK3-222ENST00000568232 FTH1P02794 183 aa11.07□□□□□ -0.64
CLK3-222ENST00000568232 RAF1P04049 648 aa11.07□□□□□ -0.64
CLK3-222ENST00000568232 KRT1P04264 644 aa11.07□□□□□ -0.64
CLK3-222ENST00000568232 ANXA5P08758 320 aa11.07□□□□□ -0.64
CLK3-222ENST00000568232 TFEBP19484 476 aa11.07□□□□□ -0.64
CLK3-222ENST00000568232 KIR2DL3P43628 341 aa11.07□□□□□ -0.64
CLK3-222ENST00000568232 MYL5Q02045 173 aa11.07□□□□□ -0.64
CLK3-222ENST00000568232 TYRO3Q06418 890 aa11.07□□□□□ -0.64
CLK3-222ENST00000568232 CMPK2Q5EBM0 449 aa11.07□□□□□ -0.64
CLK3-222ENST00000568232 DNAJC21Q5F1R6 531 aaKnown RBP11.07□□□□□ -0.64
CLK3-222ENST00000568232 MFSD4BQ5TF39 518 aa11.07□□□□□ -0.64
CLK3-222ENST00000568232 LRRC8BQ6P9F7 803 aa11.07□□□□□ -0.64
CLK3-222ENST00000568232 CIARTQ8N365 385 aaPredicted RBP11.07□□□□□ -0.64
CLK3-222ENST00000568232 HORMAD2Q8N7B1 307 aa11.07□□□□□ -0.64
CLK3-222ENST00000568232 OR2L3Q8NG85 312 aa11.07□□□□□ -0.64
CLK3-222ENST00000568232 ZFYVE21Q9BQ24 234 aa11.07□□□□□ -0.64
CLK3-222ENST00000568232 CDCP1Q9H5V8 836 aa11.07□□□□□ -0.64
CLK3-222ENST00000568232 SLC39A10Q9ULF5 831 aa11.07□□□□□ -0.64
CLK3-222ENST00000568232 A6NNC1 897 aa11.06□□□□□ -0.64
CLK3-222ENST00000568232 INAFM1C9JVW0 142 aa11.06□□□□□ -0.64
CLK3-222ENST00000568232 PRPF4O43172 522 aaKnown RBP eCLIP11.06□□□□□ -0.64
CLK3-222ENST00000568232 PRMT3O60678 531 aa11.06□□□□□ -0.64
CLK3-222ENST00000568232 GEMP55040 296 aa11.06□□□□□ -0.64
CLK3-222ENST00000568232 HSPA14Q0VDF9 509 aa11.06□□□□□ -0.64
CLK3-222ENST00000568232 KEAP1Q14145 624 aa11.06□□□□□ -0.64
CLK3-222ENST00000568232 MESDQ14696 234 aa11.06□□□□□ -0.64
CLK3-222ENST00000568232 MINDY4Q4G0A6 757 aa11.06□□□□□ -0.64
CLK3-222ENST00000568232 CCSMST1Q4G0I0 132 aa11.06□□□□□ -0.64
CLK3-222ENST00000568232 FIGNQ5HY92 759 aa11.06□□□□□ -0.64
CLK3-222ENST00000568232 DENND5AQ6IQ26 1287 aa11.06□□□□□ -0.64
CLK3-222ENST00000568232 ALKBH5Q6P6C2 394 aaKnown RBP11.06□□□□□ -0.64
CLK3-222ENST00000568232 MFSD7Q6UXD7 560 aa11.06□□□□□ -0.64
CLK3-222ENST00000568232 ACAD11Q709F0 780 aa11.06□□□□□ -0.64
CLK3-222ENST00000568232 ANKRD37Q7Z713 158 aa11.06□□□□□ -0.64
CLK3-222ENST00000568232 DCUN1D3Q8IWE4 304 aa11.06□□□□□ -0.64
CLK3-222ENST00000568232 SLC22A15Q8IZD6 547 aa11.06□□□□□ -0.64
CLK3-222ENST00000568232 CSNK1A1LQ8N752 337 aa11.06□□□□□ -0.64
CLK3-222ENST00000568232 MYRIPQ8NFW9 859 aa11.06□□□□□ -0.64
CLK3-222ENST00000568232 OR52N2Q8NGI0 321 aa11.06□□□□□ -0.64
CLK3-222ENST00000568232 OR5M3Q8NGP4 307 aa11.06□□□□□ -0.64
CLK3-222ENST00000568232 OR2A1Q8NGT9 310 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms