RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 NATD1Q8N6N6 113 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 ZFP41Q8N8Y5 198 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 GPRC5AQ8NFJ5 357 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 SH3KBP1Q96B97 665 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 CARS2Q9HA77 564 aaKnown RBP10.6□□□□□ -0.71
PALB2-206ENST00000568219 FZD4Q9ULV1 537 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 AP3M1Q9Y2T2 418 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 DERAQ9Y315 318 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 ASB1Q9Y576 335 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 ANKDD1BA6NHY2 528 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 UNCXA6NJT0 531 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 A8MUA0 341 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 ISM1B1AKI9 464 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 WWP2O00308 870 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 PIRO00625 290 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 PCDHGA12O60330 932 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 NR2F6P10588 404 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 MTHFD2P13995 350 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 HOXA11P31270 313 aaPredicted RBP10.6□□□□□ -0.71
PALB2-206ENST00000568219 PPP2R2BQ00005 443 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 ABHD18Q0P651 414 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 SEMA3AQ14563 771 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 CCSAPQ6IQ19 270 aaPredicted RBP10.6□□□□□ -0.71
PALB2-206ENST00000568219 PTRH1Q86Y79 214 aaKnown RBP10.6□□□□□ -0.71
PALB2-206ENST00000568219 CNTN4Q8IWV2 1026 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 TMEM86AQ8N2M4 240 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 SLC5A8Q8N695 610 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 RHEBL1Q8TAI7 183 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 IMP4Q96G21 291 aaKnown RBP10.6□□□□□ -0.71
PALB2-206ENST00000568219 TXNRD2Q9NNW7 524 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 PTCH2Q9Y6C5 1203 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 ARFGEF1Q9Y6D6 1849 aa10.6□□□□□ -0.71
PALB2-206ENST00000568219 PCNTO95613 3336 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 NPPAP01160 153 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 PTHP01270 115 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 PBX3P40426 434 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 TGM4P49221 684 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 RGS6P49758 472 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 AFF1P51825 1210 aaKnown RBP10.59□□□□□ -0.71
PALB2-206ENST00000568219 RPS7P62081 194 aaKnown RBP10.59□□□□□ -0.71
PALB2-206ENST00000568219 SLC35A2P78381 396 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 CPTPQ5TA50 214 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 CPZQ66K79 652 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 FAM9CQ8IZT9 166 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 YIPF7Q8N8F6 280 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 KCTD13Q8WZ19 329 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 SLIRPQ9GZT3 109 aaKnown RBP10.59□□□□□ -0.71
PALB2-206ENST00000568219 MIOSQ9NXC5 875 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 RDH8Q9NYR8 311 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 GPRC5BQ9NZH0 403 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 PTGFRNQ9P2B2 879 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 EIF3KQ9UBQ5 218 aaKnown RBP10.59□□□□□ -0.71
PALB2-206ENST00000568219 SCN7AQ01118 1682 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 A0A0D9SEW6 157 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 A0A1B0GVC2 190 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 A6NIN4 97 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 ORC5O43913 435 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 CCNB2O95067 398 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 ALX3O95076 343 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 WARSP23381 471 aaKnown RBP10.59□□□□□ -0.71
PALB2-206ENST00000568219 RYKP34925 604 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 PRKAG1P54619 331 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 FGFBP1Q14512 234 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 PROX2Q3B8N5 592 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 SETMARQ53H47 684 aaPredicted RBP10.59□□□□□ -0.71
PALB2-206ENST00000568219 LRRC66Q68CR7 880 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 CXorf57Q6NSI4 855 aaKnown RBP10.59□□□□□ -0.71
PALB2-206ENST00000568219 LAPTM4BQ86VI4 370 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 DENND1CQ8IV53 801 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 ARHGAP12Q8IWW6 846 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 PIANPQ8IYJ0 282 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 OR4A15Q8NGL6 344 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 PIGKQ92643 395 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 C11orf24Q96F05 449 aaPredicted RBP10.59□□□□□ -0.71
PALB2-206ENST00000568219 TEPSINQ96N21 525 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 TSGA13Q96PP4 275 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 MKRN2Q9H000 416 aaKnown RBP10.59□□□□□ -0.71
PALB2-206ENST00000568219 ANKRA2Q9H9E1 313 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 MIEF1Q9NQG6 463 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 PRDM5Q9NQX1 630 aaPredicted RBP10.59□□□□□ -0.71
PALB2-206ENST00000568219 FBXO8Q9NRD0 319 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 MAPRE3Q9UPY8 281 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 A0A1W2PQL4 384 aaPredicted RBP10.59□□□□□ -0.71
PALB2-206ENST00000568219 METTL15A6NJ78 407 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 SAP18O00422 153 aaKnown RBP10.59□□□□□ -0.71
PALB2-206ENST00000568219 KMOO15229 486 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 GADD45GO95257 159 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 RHOQP17081 205 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 CXCR2P25025 360 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 SLC11A2P49281 568 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 RPS24P62847 133 aaKnown RBP10.59□□□□□ -0.71
PALB2-206ENST00000568219 VLDLRP98155 873 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 CSTF1Q05048 431 aaKnown RBP10.59□□□□□ -0.71
PALB2-206ENST00000568219 BCL2L1Q07817 233 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 ABRQ12979 859 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 CDH18Q13634 790 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 SYTL3Q4VX76 610 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 RASSF6Q6ZTQ3 369 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 CHMP1BQ7LBR1 199 aa10.59□□□□□ -0.71
PALB2-206ENST00000568219 LAX1Q8IWV1 398 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms